RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 UTP14CQ5TAP6 766 aaKnown RBP14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 NLRX1Q86UT6 975 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 ZNF577Q9BSK1 485 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 KIAA0754O94854 1291 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 RCSD1Q6JBY9 416 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 C8orf74Q6P047 294 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 GDAP1L1Q96MZ0 367 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 FCER1AP12319 257 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 BHMT2Q9H2M3 363 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 POLD4Q9HCU8 107 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 GSTTP1A0A1W2PQM5 241 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 LGALS16A8MUM7 142 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 IBSPP21815 317 aaPredicted RBP14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 TNNC1P63316 161 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 PSMD2Q13200 908 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 HPS3Q969F9 1004 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 LARSQ9P2J5 1176 aaKnown RBP14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 PRPHP41219 470 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 ARHGAP4P98171 946 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 NCBP1Q09161 790 aaKnown RBP14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 BIRC3Q13489 604 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 EARS2Q5JPH6 523 aaKnown RBP14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 ARHGEF16Q5VV41 709 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 CLIC2O15247 247 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 MTF1Q14872 753 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 GBP6Q6ZN66 633 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 SRGAP1Q7Z6B7 1085 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 RTKN2Q8IZC4 609 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 RTFDC1Q9BY42 306 aaPredicted RBP14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 TAOK3Q9H2K8 898 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 METTL14Q9HCE5 456 aaKnown RBP14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 ABHD10Q9NUJ1 306 aa14.54□□□□□ -0.08
PPP4R3B-206ENST00000616407 FOXP2O15409 715 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 EXOC3L4Q17RC7 722 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 MCF2L2Q86YR7 1114 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 TRIM9Q9C026 710 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 ZMYND12Q9H0C1 365 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 POTEB3A0JP26 581 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 SHTN1A0MZ66 631 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 POTECB2RU33 542 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 CEP104O60308 925 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 NF2P35240 595 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 STAT1P42224 750 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 LRRC63Q05C16 580 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 AP3B2Q13367 1082 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 PTPROQ16827 1216 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 FAM83BQ5T0W9 1011 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 POTEBQ6S5H4 581 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 KRT26Q7Z3Y9 468 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 FMNL3Q8IVF7 1028 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 IFT74Q96LB3 600 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 FNBP1Q96RU3 617 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 IMPG2Q9BZV3 1241 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 LMO7Q8WWI1 1683 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 SORBS3O60504 671 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 RASSF7Q02833 373 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 RAD54LQ92698 747 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 HOOK2Q96ED9 719 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 HINFPQ9BQA5 517 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 PLEKHA4Q9H4M7 779 aa14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 NHEJ1Q9H9Q4 299 aaPredicted RBP14.53□□□□□ -0.08
PPP4R3B-206ENST00000616407 K7ENM7 598 aa14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 CAPN2P17655 700 aa14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 CTTNQ14247 550 aaKnown RBP14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 XKR9Q5GH70 373 aa14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 STRIP1Q5VSL9 837 aa14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 PPP1R18Q6NYC8 613 aa14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 RABGGTAQ92696 567 aa14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 PLVAPQ9BX97 442 aa14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 ZNF277Q9NRM2 450 aaPredicted RBP14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 EXOC7Q9UPT5 735 aa14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 A0A1B0GTH6 734 aa14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 PVALEFA0A1B0GWK0 134 aa14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 PALM3A6NDB9 673 aaPredicted RBP14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 KRT5P13647 590 aa14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 U2AF1L4Q8WU68 220 aaKnown RBP14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 CALCOCO1Q9P1Z2 691 aa14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 ATF5Q9Y2D1 282 aaPredicted RBP14.52□□□□□ -0.08
PPP4R3B-206ENST00000616407 TTC26A0AVF1 554 aa14.52□□□□□ -0.09
PPP4R3B-206ENST00000616407 SFI1A8K8P3 1242 aa14.52□□□□□ -0.09
PPP4R3B-206ENST00000616407 RPS6KA1Q15418 735 aa14.52□□□□□ -0.09
PPP4R3B-206ENST00000616407 FAM102BQ5T8I3 360 aa14.52□□□□□ -0.09
PPP4R3B-206ENST00000616407 DCAF15Q66K64 600 aa14.52□□□□□ -0.09
PPP4R3B-206ENST00000616407 HHIPL2Q6UWX4 724 aa14.52□□□□□ -0.09
PPP4R3B-206ENST00000616407 IL17RBQ9NRM6 502 aa14.52□□□□□ -0.09
PPP4R3B-206ENST00000616407 DKC1O60832 514 aaKnown RBP eCLIP14.52□□□□□ -0.09
PPP4R3B-206ENST00000616407 PRPF6O94906 941 aaKnown RBP14.52□□□□□ -0.09
PPP4R3B-206ENST00000616407 CFAP221Q4G0U5 840 aa14.52□□□□□ -0.09
PPP4R3B-206ENST00000616407 DNAJC21Q5F1R6 531 aaKnown RBP14.52□□□□□ -0.09
PPP4R3B-206ENST00000616407 PIGOQ8TEQ8 1089 aa14.52□□□□□ -0.09
PPP4R3B-206ENST00000616407 MYO1AQ9UBC5 1043 aa14.52□□□□□ -0.09
PPP4R3B-206ENST00000616407 ECM2O94769 699 aaPredicted RBP14.51□□□□□ -0.09
PPP4R3B-206ENST00000616407 GJC1P36383 396 aa14.51□□□□□ -0.09
PPP4R3B-206ENST00000616407 EIF4A3P38919 411 aaKnown RBP14.51□□□□□ -0.09
PPP4R3B-206ENST00000616407 STAT3P40763 770 aa14.51□□□□□ -0.09
PPP4R3B-206ENST00000616407 EN1Q05925 392 aaPredicted RBP14.51□□□□□ -0.09
PPP4R3B-206ENST00000616407 ORC2Q13416 577 aaPredicted RBP14.51□□□□□ -0.09
PPP4R3B-206ENST00000616407 KCNB1Q14721 858 aa14.51□□□□□ -0.09
PPP4R3B-206ENST00000616407 BRD3Q15059 726 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms