RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 A0A1W2PQC6 194 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 SRGNP10124 158 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 SNX1Q13596 522 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 RNF26Q9BY78 433 aaPredicted RBP17.13■□□□□ 0.33
SYNRG-223ENST00000616179 ECT2Q9H8V3 914 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 GPR108Q9NPR9 543 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 CHN1P15882 459 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 ARHGEF2Q92974 986 aaKnown RBP17.13■□□□□ 0.33
SYNRG-223ENST00000616179 OSBPL7Q9BZF2 842 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 MKNK2Q9HBH9 465 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 KCNA6P17658 529 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 FOXO4P98177 505 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 SETDB1Q15047 1291 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 PLCB4Q15147 1175 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 APTXQ7Z2E3 356 aaKnown RBP17.13■□□□□ 0.33
SYNRG-223ENST00000616179 ADSSL1Q8N142 457 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 LCORLQ8N3X6 602 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.13■□□□□ 0.33
SYNRG-223ENST00000616179 KIF20BQ96Q89 1820 aa17.13■□□□□ 0.33
SYNRG-223ENST00000616179 ANKRD62A6NC57 917 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 ZRSR2Q15696 482 aaKnown RBP17.12■□□□□ 0.33
SYNRG-223ENST00000616179 LONP2Q86WA8 852 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 RPUSD2Q8IZ73 545 aaKnown RBP17.12■□□□□ 0.33
SYNRG-223ENST00000616179 MTMR8Q96EF0 704 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 PRMT1Q99873 361 aaKnown RBP17.12■□□□□ 0.33
SYNRG-223ENST00000616179 DDX23Q9BUQ8 820 aaKnown RBP17.12■□□□□ 0.33
SYNRG-223ENST00000616179 DISC1Q9NRI5 854 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 RFX7Q2KHR2 1363 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 CALML3P27482 149 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 BIRC3Q13489 604 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 ARMC9Q7Z3E5 817 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 EGFL6Q8IUX8 553 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 SPATA5Q8NB90 893 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 NKX2-3Q8TAU0 364 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 CELF4Q9BZC1 486 aaKnown RBP17.12■□□□□ 0.33
SYNRG-223ENST00000616179 FAM217BQ9NTX9 383 aaPredicted RBP17.12■□□□□ 0.33
SYNRG-223ENST00000616179 KIF3CO14782 793 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 SLC30A9Q6PML9 568 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 FAM47EQ6ZV65 393 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 HOOK2Q96ED9 719 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 AZI2Q9H6S1 392 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 ABCA9Q8IUA7 1624 aa17.12■□□□□ 0.33
SYNRG-223ENST00000616179 MAGEB6P1A0A0J9YX57 407 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 SART1O43290 800 aaKnown RBP17.11■□□□□ 0.33
SYNRG-223ENST00000616179 NAPAP54920 295 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 ELF3P78545 371 aaPredicted RBP17.11■□□□□ 0.33
SYNRG-223ENST00000616179 VWA3BQ502W6 1294 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 FMO2Q99518 471 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 ARHGAP20Q9P2F6 1191 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 MTRF1LQ9UGC7 380 aaKnown RBP17.11■□□□□ 0.33
SYNRG-223ENST00000616179 SNX24Q9Y343 169 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 OVOS2A0A0J9YW53 1432 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 OVOS2Q6IE36 1432 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 PLCG1P19174 1290 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 MKRN4PQ13434 485 aaPredicted RBP17.11■□□□□ 0.33
SYNRG-223ENST00000616179 RABL6Q3YEC7 729 aaPredicted RBP17.11■□□□□ 0.33
SYNRG-223ENST00000616179 SGMS1Q86VZ5 419 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 DHTKD1Q96HY7 919 aaPredicted RBP17.11■□□□□ 0.33
SYNRG-223ENST00000616179 XPO6Q96QU8 1125 aaKnown RBP17.11■□□□□ 0.33
SYNRG-223ENST00000616179 TAOK3Q9H2K8 898 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 TMBIM4Q9HC24 238 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 DNAJC17Q9NVM6 304 aaKnown RBP17.11■□□□□ 0.33
SYNRG-223ENST00000616179 FAM237AA0A1B0GTK4 181 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 PGRMC1O00264 195 aaKnown RBP17.11■□□□□ 0.33
SYNRG-223ENST00000616179 SUN1O94901 812 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 IGHMBP2P38935 993 aaKnown RBP17.11■□□□□ 0.33
SYNRG-223ENST00000616179 TSNAXIP1Q2TAA8 658 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 NCAPD2Q15021 1401 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 IGF2BP3O00425 579 aaKnown RBP eCLIP17.11■□□□□ 0.33
SYNRG-223ENST00000616179 STK4Q13043 487 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 ZNF449Q6P9G9 518 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 CAVIN3Q969G5 261 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 KLHL14Q9P2G3 628 aa17.11■□□□□ 0.33
SYNRG-223ENST00000616179 NEURL4Q96JN8 1562 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 LUC7L3O95232 432 aaKnown RBP17.1■□□□□ 0.33
SYNRG-223ENST00000616179 KLRC1P26715 233 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 ZNF131P52739 623 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 UBE3CQ15386 1083 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 CDC37Q16543 378 aaPredicted RBP17.1■□□□□ 0.33
SYNRG-223ENST00000616179 BLIDQ8IZY5 108 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 SLC17A8Q8NDX2 589 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 CABLES1Q8TDN4 633 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 U2AF1L4Q8WU68 220 aaKnown RBP17.1■□□□□ 0.33
SYNRG-223ENST00000616179 ZSCAN10Q96SZ4 725 aaPredicted RBP17.1■□□□□ 0.33
SYNRG-223ENST00000616179 GREM2Q9H772 168 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 BATF3Q9NR55 127 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 CCDC169A6NNP5 214 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 TTI1O43156 1089 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 CAND2O75155 1236 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 RASSF9O75901 435 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 EPB41P11171 864 aaKnown RBP17.1■□□□□ 0.33
SYNRG-223ENST00000616179 SCG2P13521 617 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 STX2P32856 288 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 LONP1P36776 959 aaKnown RBP17.1■□□□□ 0.33
SYNRG-223ENST00000616179 LRRC34Q8IZ02 419 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 TLR10Q9BXR5 811 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 ARPP21Q9UBL0 812 aaPredicted RBP17.1■□□□□ 0.33
SYNRG-223ENST00000616179 RNF14Q9UBS8 474 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 TBK1Q9UHD2 729 aa17.1■□□□□ 0.33
SYNRG-223ENST00000616179 RASAL2Q9UJF2 1139 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms