RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 FBXO11Q86XK2 927 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 OR9Q1Q8NGQ5 310 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 FOPNLQ96NB1 174 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 TXLNGQ9NUQ3 528 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 ZNF197O14709 1029 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 PRDM1O75626 825 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 DEXIO95424 95 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 CCDC159P0C7I6 412 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 NSFP46459 744 aaKnown RBP13.68□□□□□ -0.22
TCF4-248ENST00000616053 TWF2Q6IBS0 349 aaKnown RBP13.68□□□□□ -0.22
TCF4-248ENST00000616053 HAUS6Q7Z4H7 955 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 NUDCD3Q8IVD9 361 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 SRRM1Q8IYB3 904 aaKnown RBP13.68□□□□□ -0.22
TCF4-248ENST00000616053 RHPN1Q8TCX5 695 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 DCUN1D1Q96GG9 259 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.68□□□□□ -0.22
TCF4-248ENST00000616053 TRAF3IP3Q9Y228 551 aa13.68□□□□□ -0.22
TCF4-248ENST00000616053 A0A1B0GVL5 298 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 CCND2P30279 289 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 SNX30Q5VWJ9 437 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 GPBP1Q86WP2 473 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 ABCC8Q09428 1581 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 OSTNP61366 133 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 PLA2G4DQ86XP0 818 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 ECT2Q9H8V3 914 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 DHX29Q7Z478 1369 aaKnown RBP13.67□□□□□ -0.22
TCF4-248ENST00000616053 FAM135AQ9P2D6 1515 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 RASGRF2O14827 1237 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 AOC3Q16853 763 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 PKN3Q6P5Z2 889 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 EGFL8Q99944 293 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 FRMPD2Q68DX3 1309 aaPredicted RBP13.67□□□□□ -0.22
TCF4-248ENST00000616053 GTPBP6O43824 516 aaPredicted RBP13.67□□□□□ -0.22
TCF4-248ENST00000616053 CPB1P15086 417 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 MARK3P27448 753 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 ICA1Q05084 483 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 BRAPQ7Z569 592 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 PSTPIP2Q9H939 334 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 GALNT8Q9NY28 637 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 PRG4Q92954 1404 aaPredicted RBP13.67□□□□□ -0.22
TCF4-248ENST00000616053 KRT222Q8N1A0 295 aa13.67□□□□□ -0.22
TCF4-248ENST00000616053 ESRRGP62508 458 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 PIK3R5Q8WYR1 880 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 TYW1Q9NV66 732 aaKnown RBP13.66□□□□□ -0.22
TCF4-248ENST00000616053 NDFIP2Q9NV92 336 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 PCDHGB4Q9UN71 923 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 B4E1Z4 1266 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 RGS16O15492 202 aaPredicted RBP13.66□□□□□ -0.22
TCF4-248ENST00000616053 DARSP14868 501 aaKnown RBP13.66□□□□□ -0.22
TCF4-248ENST00000616053 KRT17Q04695 432 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 PSMB7Q99436 277 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 DAPK1P53355 1430 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 GNA14O95837 355 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 MCTP2Q6DN12 878 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 FAM89AQ96GI7 184 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 GPBP1L1Q9HC44 474 aaPredicted RBP13.66□□□□□ -0.22
TCF4-248ENST00000616053 IKBKBO14920 756 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 MED7O43513 233 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 CCDC15Q0P6D6 951 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 ANKRD49Q8WVL7 239 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 SECISBP2LQ93073 1101 aaKnown RBP13.66□□□□□ -0.22
TCF4-248ENST00000616053 TSEN34Q9BSV6 310 aaKnown RBP13.66□□□□□ -0.22
TCF4-248ENST00000616053 CUEDC2Q9H467 287 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 PTK2Q05397 1052 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 ART3Q13508 389 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 MTMR3Q13615 1198 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 AKAP4Q5JQC9 854 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 CATSPER4Q7RTX7 472 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 PCGF5Q86SE9 256 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 SLFN12Q8IYM2 578 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 ENGASEQ8NFI3 743 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 FSD1LQ9BXM9 530 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 KDM4CQ9H3R0 1056 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 NDUFAB1O14561 156 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 TFRCP02786 760 aaKnown RBP13.66□□□□□ -0.22
TCF4-248ENST00000616053 PAPOLAP51003 745 aaKnown RBP13.66□□□□□ -0.22
TCF4-248ENST00000616053 KSR2Q6VAB6 950 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 VPS39Q96JC1 886 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 NDEL1Q9GZM8 345 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 NXF1Q9UBU9 619 aaKnown RBP13.66□□□□□ -0.22
TCF4-248ENST00000616053 NBPF1Q3BBV0 1214 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 RIPOR2Q9Y4F9 1068 aa13.66□□□□□ -0.22
TCF4-248ENST00000616053 PDE8AO60658 829 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 PDCLQ13371 301 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 ABCB5Q2M3G0 1257 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 MEIS1O00470 390 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 ATF2P15336 505 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 NUP62P37198 522 aaPredicted RBP13.65□□□□□ -0.22
TCF4-248ENST00000616053 MED21Q13503 144 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 RCN2Q14257 317 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 CABP7Q86V35 215 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 DNAJC25Q9H1X3 360 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 EXO5Q9H790 373 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 ZSCAN22P10073 491 aaPredicted RBP13.65□□□□□ -0.22
TCF4-248ENST00000616053 SFSWAPQ12872 951 aaKnown RBP13.65□□□□□ -0.22
TCF4-248ENST00000616053 SYTL3Q4VX76 610 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 HDXQ7Z353 690 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 ATP8A2Q9NTI2 1148 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 MCF2LO15068 1137 aa13.65□□□□□ -0.22
TCF4-248ENST00000616053 DCTN3O75935 186 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms