RNA–Protein interactions for RNA: ENST00000615680.4

DCLK1-208, Transcript of doublecortin like kinase 1, humanhuman

TSL 2 BASIC

Gene DCLK1, Length 7,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-208ENST00000615680 RBM46Q8TBY0 533 aaKnown RBP7.57□□□□□ -1.2
DCLK1-208ENST00000615680 SCYL1Q96KG9 808 aa7.57□□□□□ -1.2
DCLK1-208ENST00000615680 RAB17Q9H0T7 212 aa7.57□□□□□ -1.2
DCLK1-208ENST00000615680 ZNRF3Q9ULT6 936 aa7.57□□□□□ -1.2
DCLK1-208ENST00000615680 PCDHA4Q9UN74 947 aa7.57□□□□□ -1.2
DCLK1-208ENST00000615680 TRIM35Q9UPQ4 493 aa7.57□□□□□ -1.2
DCLK1-208ENST00000615680 BNIP3LO60238 219 aa7.57□□□□□ -1.2
DCLK1-208ENST00000615680 NSUN6Q8TEA1 469 aaKnown RBP7.57□□□□□ -1.2
DCLK1-208ENST00000615680 BLZF1Q9H2G9 400 aa7.57□□□□□ -1.2
DCLK1-208ENST00000615680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.57□□□□□ -1.2
DCLK1-208ENST00000615680 AATKQ6ZMQ8 1374 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 ARHGEF5Q12774 1597 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 ATXN8OSP0DMR3 200 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 KRT15P19012 456 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 TRAPPC10P48553 1259 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 VPS72Q15906 364 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 PPP1R16BQ96T49 567 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 NAPGQ99747 312 aaPredicted RBP7.56□□□□□ -1.2
DCLK1-208ENST00000615680 TDRD3Q9H7E2 651 aaKnown RBP7.56□□□□□ -1.2
DCLK1-208ENST00000615680 DYRK4Q9NR20 520 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 TAB2Q9NYJ8 693 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 USP17L15C9J2P7 530 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 USP17L13C9JLJ4 530 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 USP17L11C9JVI0 530 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 USP17L18D6R9N7 530 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 USP17L22D6RA61 530 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 USP17L17D6RBQ6 530 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 USP17L19D6RCP7 530 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 USP17L20D6RJB6 530 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 H7C0C1 242 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 PSMC2P35998 433 aaKnown RBP7.56□□□□□ -1.2
DCLK1-208ENST00000615680 ATP5OP48047 213 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 NLRP12P59046 1061 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 USP17L24Q0WX57 530 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 STMN2Q93045 179 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 TRERF1Q96PN7 1200 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 RMDN3Q96TC7 470 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 LDHAP00338 332 aaKnown RBP7.56□□□□□ -1.2
DCLK1-208ENST00000615680 CMTR1Q8N1G2 835 aaKnown RBP7.56□□□□□ -1.2
DCLK1-208ENST00000615680 ARHGEF1Q92888 912 aaKnown RBP7.56□□□□□ -1.2
DCLK1-208ENST00000615680 VPS37BQ9H9H4 285 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 FAM207AQ9NSI2 230 aaPredicted RBP7.56□□□□□ -1.2
DCLK1-208ENST00000615680 MAP3K4Q9Y6R4 1608 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 PNMA6FA0A0J9YX94 578 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 CCDC160A6NGH7 325 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 KRT3P12035 628 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 HUNKP57058 714 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 MECOMQ03112 1051 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 RBBP5Q15291 538 aaKnown RBP7.56□□□□□ -1.2
DCLK1-208ENST00000615680 TMTC4Q5T4D3 741 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 SUSD4Q5VX71 490 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 SSH3Q8TE77 659 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 TM6SF1Q9BZW5 370 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 NLRC4Q9NPP4 1024 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 BAG5Q9UL15 447 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 ADCY9O60503 1353 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 TNS3Q68CZ2 1445 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 ADORA1P30542 326 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 DYNLL1P63167 89 aaKnown RBP7.56□□□□□ -1.2
DCLK1-208ENST00000615680 PSMD2Q13200 908 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 CCDC121Q6ZUS5 278 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 GJA10Q969M2 543 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 NUF2Q9BZD4 464 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 STK17AQ9UEE5 414 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 SPP2Q13103 211 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 CFAP221Q4G0U5 840 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 SP8Q8IXZ3 490 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 NXF1Q9UBU9 619 aaKnown RBP7.56□□□□□ -1.2
DCLK1-208ENST00000615680 CNOT7Q9UIV1 285 aaKnown RBP7.56□□□□□ -1.2
DCLK1-208ENST00000615680 PTCH1Q13635 1447 aa7.56□□□□□ -1.2
DCLK1-208ENST00000615680 RLBP1P12271 317 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 ABCB4P21439 1286 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 CDK8P49336 464 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 CCDC62Q6P9F0 684 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 BEST2Q8NFU1 509 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 GCOM2Q9BZD3 368 aaPredicted RBP7.55□□□□□ -1.2
DCLK1-208ENST00000615680 PLCB1Q9NQ66 1216 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 SYNMO15061 1565 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 PPFIA4O75335 1185 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 GPSM2P81274 684 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 C10orf67Q8IYJ2 551 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 RNF26Q9BY78 433 aaPredicted RBP7.55□□□□□ -1.2
DCLK1-208ENST00000615680 USP44Q9H0E7 712 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 BCAP29Q9UHQ4 241 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 RPAP1Q9BWH6 1393 aaPredicted RBP7.55□□□□□ -1.2
DCLK1-208ENST00000615680 HUS1O60921 280 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 OSTNP61366 133 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 MTMR1Q13613 665 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 MAPK6Q16659 721 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 ATP6V1E2Q96A05 226 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 PRIMPOLQ96LW4 560 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 ACAD9Q9H845 621 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 HERC5Q9UII4 1024 aaKnown RBP7.55□□□□□ -1.2
DCLK1-208ENST00000615680 IGSF1Q8N6C5 1336 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 TRAPPC3O43617 180 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 EVCP57679 992 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 LMNB2Q03252 620 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 SKAP1Q86WV1 359 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 PPFIBP2Q8ND30 876 aa7.55□□□□□ -1.2
DCLK1-208ENST00000615680 TYW1Q9NV66 732 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms