RNA–Protein interactions for RNA: ENST00000615525.1

NCAM1-223, Transcript of neural cell adhesion molecule 1, human

TSL 5

Gene NCAM1, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-223	ENST00000615525	USP17L19	D6RCP7	530 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	USP17L20	D6RJB6	530 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	CD44	P16070	742 aa	Known RBP	13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	CDC25A	P30304	524 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	CCT6A	P40227	531 aa	Known RBP	13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	GHRHR	Q02643	423 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	USP17L24	Q0WX57	530 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	RASA3	Q14644	834 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	PTPN14	Q15678	1187 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	TCP11X2	Q5H9J9	407 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	FAM83B	Q5T0W9	1011 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	ARMCX5	Q6P1M9	558 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	USP17L6P	Q6QN14	398 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	CCDC65	Q8IXS2	484 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	TRMT44	Q8IYL2	757 aa	Known RBP	13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	CCAR2	Q8N163	923 aa	Known RBP	13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	PRPF38A	Q8NAV1	312 aa	Known RBP	13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	RETREG2	Q8NC44	543 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	HAS1	Q92839	578 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	P2RX5	Q93086	422 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	TRIM47	Q96LD4	638 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	TSG101	Q99816	390 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	SGIP1	Q9BQI5	828 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	NUP58	Q9BVL2	599 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	ZNF341	Q9BYN7	854 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	TMEM39B	Q9GZU3	492 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	BCS1L	Q9Y276	419 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	DOCK1	Q14185	1865 aa		13.2	□□□□□ -0.3
NCAM1-223	ENST00000615525	KCNJ18	B7U540	433 aa		13.19	□□□□□ -0.3
NCAM1-223	ENST00000615525	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.19	□□□□□ -0.3
NCAM1-223	ENST00000615525	DYNC1I1	O14576	645 aa		13.19	□□□□□ -0.3
NCAM1-223	ENST00000615525	N4BP3	O15049	544 aa		13.19	□□□□□ -0.3
NCAM1-223	ENST00000615525	ICAM1	P05362	532 aa		13.19	□□□□□ -0.3
NCAM1-223	ENST00000615525	ZNF76	P36508	570 aa		13.19	□□□□□ -0.3
NCAM1-223	ENST00000615525	DNM2	P50570	870 aa		13.19	□□□□□ -0.3
NCAM1-223	ENST00000615525	KCNJ12	Q14500	433 aa		13.19	□□□□□ -0.3
NCAM1-223	ENST00000615525	NEK9	Q8TD19	979 aa		13.19	□□□□□ -0.3
NCAM1-223	ENST00000615525	SP7	Q8TDD2	431 aa	Predicted RBP	13.19	□□□□□ -0.3
NCAM1-223	ENST00000615525	STAM	Q92783	540 aa		13.19	□□□□□ -0.3
NCAM1-223	ENST00000615525	PNMA5	Q96PV4	448 aa		13.19	□□□□□ -0.3
NCAM1-223	ENST00000615525	WDR11	Q9BZH6	1224 aa		13.19	□□□□□ -0.3
NCAM1-223	ENST00000615525	BLOC1S4	Q9NUP1	217 aa		13.19	□□□□□ -0.3
NCAM1-223	ENST00000615525	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	POTEM	A6NI47	508 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	EDIL3	O43854	480 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	TNNT1	P13805	278 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	RPA1	P27694	616 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	PBX1	P40424	430 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	ECE1	P42892	770 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	COPB1	P53618	953 aa	Known RBP	13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	STX17	P56962	302 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	RRP1B	Q14684	758 aa	Known RBP	13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	KIF4B	Q2VIQ3	1234 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	NBPF9	Q3BBW0	867 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	USH1G	Q495M9	461 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	ARHGAP27	Q6ZUM4	889 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	NIPA1	Q7RTP0	329 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	APTX	Q7Z2E3	356 aa	Known RBP	13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	MYRIP	Q8NFW9	859 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	ETNPPL	Q8TBG4	499 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	MED15	Q96RN5	788 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	NUP88	Q99567	741 aa	Predicted RBP	13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	BAG1	Q99933	345 aa	Predicted RBP	13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	SLF1	Q9BQI6	1058 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	WDR18	Q9BV38	432 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	TUFT1	Q9NNX1	390 aa		13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	CNOT7	Q9UIV1	285 aa	Known RBP	13.18	□□□□□ -0.3
NCAM1-223	ENST00000615525	PHF20L1	A8MW92	1017 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	GNA14	O95837	355 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	BCR	P11274	1271 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	CASP1	P29466	404 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	PTGER2	P43116	358 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	GMPS	P49915	693 aa	Predicted RBP	13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	JAG1	P78504	1218 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	KRT31	Q15323	416 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	PRR16	Q569H4	304 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	CENPP	Q6IPU0	288 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	TTI2	Q6NXR4	508 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	NYAP1	Q6ZVC0	841 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	MTERF4	Q7Z6M4	381 aa	Known RBP	13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	MICALL2	Q8IY33	904 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	CSGALNACT2	Q8N6G5	542 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	KIF18A	Q8NI77	898 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	ACER1	Q8TDN7	264 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	KIFC2	Q96AC6	838 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	TEPSIN	Q96N21	525 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	INTS13	Q9NVM9	706 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	KCND2	Q9NZV8	630 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	DNM3	Q9UQ16	869 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	GDA	Q9Y2T3	454 aa		13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.17	□□□□□ -0.3
NCAM1-223	ENST00000615525	LGALS16	A8MUM7	142 aa		13.16	□□□□□ -0.3
NCAM1-223	ENST00000615525	C19orf81	C9J6K1	198 aa		13.16	□□□□□ -0.3
NCAM1-223	ENST00000615525	OAZ1	P54368	228 aa		13.16	□□□□□ -0.3
NCAM1-223	ENST00000615525	EHHADH	Q08426	723 aa		13.16	□□□□□ -0.3
NCAM1-223	ENST00000615525	TSR1	Q2NL82	804 aa	Known RBP	13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms