RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 SH3BP1Q9Y3L3 701 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 V9GY48 417 aaPredicted RBP14.61□□□□□ -0.07
FOXN3-219ENST00000615335 MYH6P13533 1939 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 UBE2Q2LH0YL09 131 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 FUT2Q10981 343 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 SPP2Q13103 211 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 BIRC2Q13490 618 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 GPATCH4Q5T3I0 446 aaKnown RBP14.6□□□□□ -0.07
FOXN3-219ENST00000615335 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 ANKRD13AQ8IZ07 590 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 DCAF4Q8WV16 495 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 GOLGA1Q92805 767 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 NUP88Q99567 741 aaPredicted RBP14.6□□□□□ -0.07
FOXN3-219ENST00000615335 RNF26Q9BY78 433 aaPredicted RBP14.6□□□□□ -0.07
FOXN3-219ENST00000615335 UBA5Q9GZZ9 404 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 STK36Q9NRP7 1315 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 TRIM75PA6NK02 468 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 TMCO5BA8MYB1 307 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 USP17L10C9JJH3 530 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 CBFA2T2O43439 604 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 ERLIN1O75477 346 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 TXLNAP40222 546 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 MYL5Q02045 173 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 PNOCQ13519 176 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 HSP90B2PQ58FF3 399 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 ZNF280CQ8ND82 737 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 GMCL1Q96IK5 515 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 CLIC6Q96NY7 704 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 VCPKMTQ9H867 229 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 VAT1LQ9HCJ6 419 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 PDE11AQ9HCR9 933 aa14.6□□□□□ -0.07
FOXN3-219ENST00000615335 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.6□□□□□ -0.07
FOXN3-219ENST00000615335 CNTNAP5Q8WYK1 1306 aa14.59□□□□□ -0.07
FOXN3-219ENST00000615335 DEXIO95424 95 aa14.59□□□□□ -0.07
FOXN3-219ENST00000615335 BMP3P12645 472 aa14.59□□□□□ -0.07
FOXN3-219ENST00000615335 ATP1A3P13637 1013 aa14.59□□□□□ -0.07
FOXN3-219ENST00000615335 TUBB4BP68371 445 aa14.59□□□□□ -0.07
FOXN3-219ENST00000615335 MTMR2Q13614 643 aa14.59□□□□□ -0.07
FOXN3-219ENST00000615335 TTBK2Q6IQ55 1244 aa14.59□□□□□ -0.07
FOXN3-219ENST00000615335 WASF1Q92558 559 aa14.59□□□□□ -0.07
FOXN3-219ENST00000615335 HSD3B7Q9H2F3 369 aa14.59□□□□□ -0.07
FOXN3-219ENST00000615335 SNCAIPQ9Y6H5 919 aa14.59□□□□□ -0.07
FOXN3-219ENST00000615335 OTOFQ9HC10 1997 aa14.59□□□□□ -0.07
FOXN3-219ENST00000615335 PRPF3O43395 683 aaKnown RBP14.58□□□□□ -0.07
FOXN3-219ENST00000615335 SERPINC1P01008 464 aa14.58□□□□□ -0.07
FOXN3-219ENST00000615335 ELF1P32519 619 aa14.58□□□□□ -0.07
FOXN3-219ENST00000615335 SLC16A2P36021 539 aa14.58□□□□□ -0.07
FOXN3-219ENST00000615335 UBASH3AP57075 661 aa14.58□□□□□ -0.07
FOXN3-219ENST00000615335 IKQ13123 557 aaPredicted RBP14.58□□□□□ -0.07
FOXN3-219ENST00000615335 SEMA3FQ13275 785 aa14.58□□□□□ -0.07
FOXN3-219ENST00000615335 KIAA1755Q5JYT7 1200 aa14.58□□□□□ -0.07
FOXN3-219ENST00000615335 FAM43BQ6ZT52 329 aaPredicted RBP14.58□□□□□ -0.07
FOXN3-219ENST00000615335 CNNM3Q8NE01 707 aa14.58□□□□□ -0.07
FOXN3-219ENST00000615335 CLMNQ96JQ2 1002 aa14.58□□□□□ -0.07
FOXN3-219ENST00000615335 WDR18Q9BV38 432 aa14.58□□□□□ -0.07
FOXN3-219ENST00000615335 KIAA1683Q9H0B3 1180 aa14.58□□□□□ -0.07
FOXN3-219ENST00000615335 ELP3Q9H9T3 547 aa14.58□□□□□ -0.07
FOXN3-219ENST00000615335 KCNH3Q9ULD8 1083 aa14.58□□□□□ -0.07
FOXN3-219ENST00000615335 CYTH3O43739 400 aa14.58□□□□□ -0.08
FOXN3-219ENST00000615335 CELF2O95319 508 aaKnown RBP14.58□□□□□ -0.08
FOXN3-219ENST00000615335 BACE1P56817 501 aa14.57□□□□□ -0.08
FOXN3-219ENST00000615335 PPP2R3AQ06190 1150 aa14.57□□□□□ -0.08
FOXN3-219ENST00000615335 DGKZQ13574 1117 aa14.57□□□□□ -0.08
FOXN3-219ENST00000615335 LONRF3Q496Y0 759 aa14.57□□□□□ -0.08
FOXN3-219ENST00000615335 FAM83BQ5T0W9 1011 aa14.57□□□□□ -0.08
FOXN3-219ENST00000615335 TRIM65Q6PJ69 517 aa14.57□□□□□ -0.08
FOXN3-219ENST00000615335 FCHSD1Q86WN1 690 aa14.57□□□□□ -0.08
FOXN3-219ENST00000615335 KRI1Q8N9T8 703 aaKnown RBP14.57□□□□□ -0.08
FOXN3-219ENST00000615335 SPZ1Q9BXG8 430 aa14.57□□□□□ -0.08
FOXN3-219ENST00000615335 FAN1Q9Y2M0 1017 aa14.57□□□□□ -0.08
FOXN3-219ENST00000615335 TMEM232C9JQI7 657 aa14.57□□□□□ -0.08
FOXN3-219ENST00000615335 ITGBL1O95965 494 aaPredicted RBP14.57□□□□□ -0.08
FOXN3-219ENST00000615335 SCP2P22307 547 aa14.57□□□□□ -0.08
FOXN3-219ENST00000615335 USP14P54578 494 aa14.57□□□□□ -0.08
FOXN3-219ENST00000615335 SAFBQ15424 915 aaKnown RBP eCLIP14.57□□□□□ -0.08
FOXN3-219ENST00000615335 SLC35G1Q2M3R5 365 aa14.57□□□□□ -0.08
FOXN3-219ENST00000615335 NOSTRINQ8IVI9 506 aa14.57□□□□□ -0.08
FOXN3-219ENST00000615335 GBA2Q9HCG7 927 aaPredicted RBP14.57□□□□□ -0.08
FOXN3-219ENST00000615335 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.57□□□□□ -0.08
FOXN3-219ENST00000615335 PHIPQ8WWQ0 1821 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 GOLGA6L9A6NEM1 432 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 ZSCAN12O43309 604 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 SMARCA1P28370 1054 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 PKN1Q16512 942 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 ADGRF4Q8IZF3 695 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 C2orf69Q8N8R5 385 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 KAT2BQ92831 832 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 RRP36Q96EU6 259 aaKnown RBP14.56□□□□□ -0.08
FOXN3-219ENST00000615335 OTUD5Q96G74 571 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 FAXDC2Q96IV6 333 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 HOOK1Q9UJC3 728 aaKnown RBP14.56□□□□□ -0.08
FOXN3-219ENST00000615335 AFG3L2Q9Y4W6 797 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 PCDHA5Q9Y5H7 936 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 PAPPA2Q9BXP8 1791 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 GCFC2P16383 781 aaKnown RBP14.56□□□□□ -0.08
FOXN3-219ENST00000615335 HMGCS2P54868 508 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 KCNV1Q6PIU1 500 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 ERO1BQ86YB8 467 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 LPAR1Q92633 364 aa14.56□□□□□ -0.08
FOXN3-219ENST00000615335 RIOX1Q9H6W3 641 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms