RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 RGS2P41220 211 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 GMPSP49915 693 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 GNG11P61952 73 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 COG2Q14746 738 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 PPP4R3CPQ6ZMV5 832 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 GPKOWQ92917 476 aaPredicted RBP eCLIP10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 DNAJC25Q9H1X3 360 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 STXBP3O00186 592 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 GRM4Q14833 912 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 DIXDC1Q155Q3 683 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 NDUFAF2Q8N183 169 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 PGBD4Q96DM1 585 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 GCOM2Q9BZD3 368 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 MAP3K20Q9NYL2 800 aaKnown RBP10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 OPA1O60313 960 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 ZNF202O95125 648 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 PSMC2P35998 433 aaKnown RBP10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 STAT3P40763 770 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 LACTBP83111 547 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 PPP2R5EQ16537 467 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 OTUD7AQ8TE49 926 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 CALR3Q96L12 384 aaKnown RBP10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 INO80B-WBP1J3KQ70 363 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 VEGFAP15692 232 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 PDIA3P30101 505 aaKnown RBP10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 PRELPP51888 382 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 KRT81Q14533 505 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 LGSNQ5TDP6 509 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 C9orf131Q5VYM1 1079 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 PROCA1Q8NCQ7 364 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 FAM20AQ96MK3 541 aa10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 LSG1Q9H089 658 aaKnown RBP10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 TSPYL2Q9H2G4 693 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 BZW2Q9Y6E2 419 aaKnown RBP10.69□□□□□ -0.7
TNFRSF9-204ENST00000615230 MANSC4A6NHS7 340 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 VAV2P52735 878 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 STX17P56962 302 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 HUNKP57058 714 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 FKBP1AP62942 108 aaKnown RBP10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 MTMR1Q13613 665 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 ARL6IP4Q66PJ3 421 aaKnown RBP10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 GRK7Q8WTQ7 553 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 RPAP3Q9H6T3 665 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 ZNF302Q9NR11 478 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 HNRNPDLO14979 420 aaKnown RBP10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 THAP12O43422 761 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 EPHX2P34913 555 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 ARL1P40616 181 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 USP50Q70EL3 339 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 MAATS1Q7Z4T9 603 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 GPRC5AQ8NFJ5 357 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 LARP4BQ92615 738 aaKnown RBP10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 ERO1AQ96HE7 468 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 RAB20Q9NX57 234 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 ARMCX3Q9UH62 379 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 IVLP07476 585 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 FAM26FQ5R3K3 315 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 APOA5Q6Q788 366 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 SESTD1Q86VW0 696 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 NUDT12Q9BQG2 462 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 FAM107BQ9H098 131 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 CACYBPQ9HB71 228 aaKnown RBP10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 ANKFY1Q9P2R3 1169 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 ACTN4O43707 911 aaKnown RBP10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 KPNA6O60684 536 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 NTSR2O95665 410 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 MCAMP43121 646 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 CPT1AP50416 773 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 AP3M2P53677 418 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 RINT1Q6NUQ1 792 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 STRBPQ96SI9 672 aaKnown RBP10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 POLR3EQ9NVU0 708 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 PSMD14O00487 310 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 KIAA0391O15091 583 aaKnown RBP10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 IFNAR1P17181 557 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 CMA1P23946 247 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 STAT1P42224 750 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 MYL7Q01449 175 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 SEMA3FQ13275 785 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 MAP7Q14244 749 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 TMTC1Q8IUR5 882 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 MAP7D3Q8IWC1 876 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 TBC1D31Q96DN5 1066 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 NT5C1BQ96P26 610 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 NDUFB9Q9Y6M9 179 aa10.68□□□□□ -0.7
TNFRSF9-204ENST00000615230 EHD2Q9NZN4 543 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 NYAP2Q9P242 653 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 CTTNBP2NLQ9P2B4 639 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 GH1P01241 217 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 XPAP23025 273 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 CYP2J2P51589 502 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 ERCC6LQ2NKX8 1250 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 SBK1Q52WX2 424 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 MICAL1Q8TDZ2 1067 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 RMDN3Q96TC7 470 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 CCL15-CCL14A0A0B4J2E2 113 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 DPYSL4O14531 572 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 GBP1P32455 592 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 E2F5Q15329 346 aa10.67□□□□□ -0.7
TNFRSF9-204ENST00000615230 CCL15Q16663 113 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms