RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 UBR1Q8IWV7 1749 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 GSTTP1A0A1W2PQM5 241 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 SSR1P43307 286 aaKnown RBP12.95□□□□□ -0.34
CDH5-208ENST00000614547 EVX2Q03828 476 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 GIGYF2Q6Y7W6 1299 aaKnown RBP12.95□□□□□ -0.34
CDH5-208ENST00000614547 U2AF1L4Q8WU68 220 aaKnown RBP12.95□□□□□ -0.34
CDH5-208ENST00000614547 SLC40A1Q9NP59 571 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 GPCPD1Q9NPB8 672 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 CEP83Q9Y592 693 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 OR52Z1P0C646 297 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 USP17L8P0C7I0 530 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 VWA3BQ502W6 1294 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 APTXQ7Z2E3 356 aaKnown RBP12.95□□□□□ -0.34
CDH5-208ENST00000614547 CCDC13Q8IYE1 715 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 ATP6V1G3Q96LB4 118 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 RAB34Q9BZG1 259 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 WDR17Q8IZU2 1322 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 SRGNP10124 158 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 MDH1P40925 334 aaKnown RBP12.94□□□□□ -0.34
CDH5-208ENST00000614547 CHRNDQ07001 517 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 NONOQ15233 471 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDH5-208ENST00000614547 HAUS3Q68CZ6 603 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 DHTKD1Q96HY7 919 aaPredicted RBP12.94□□□□□ -0.34
CDH5-208ENST00000614547 ELAC2Q9BQ52 826 aaKnown RBP12.94□□□□□ -0.34
CDH5-208ENST00000614547 LBHD1Q9BQE6 289 aaPredicted RBP12.94□□□□□ -0.34
CDH5-208ENST00000614547 EPN3Q9H201 632 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 C6orf50Q9HD87 102 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 NEFHP12036 1026 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 AARSP49588 968 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDH5-208ENST00000614547 LRCH2Q5VUJ6 765 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 OTUD6AQ7L8S5 288 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 CCDC63Q8NA47 563 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 MYCBPAPQ8TBZ2 947 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 GJA10Q969M2 543 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 SH2D4AQ9H788 454 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 DNAJC17Q9NVM6 304 aaKnown RBP12.94□□□□□ -0.34
CDH5-208ENST00000614547 ANKIB1Q9P2G1 1089 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 PPP1R1BQ9UD71 204 aaPredicted RBP12.94□□□□□ -0.34
CDH5-208ENST00000614547 GMNCA6NCL1 334 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 DAPK3O43293 454 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 PBX1P40424 430 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 PLTPP55058 493 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 MAPKAPK5Q8IW41 473 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 SLC44A5Q8NCS7 719 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 ARHGAP20Q9P2F6 1191 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 AMACRQ9UHK6 382 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 PCDH11XQ9BZA7 1347 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 PCDH11YQ9BZA8 1340 aa12.94□□□□□ -0.34
CDH5-208ENST00000614547 FAM237AA0A1B0GTK4 181 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 WTIPA6NIX2 430 aaPredicted RBP12.93□□□□□ -0.34
CDH5-208ENST00000614547 RAD51CO43502 376 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 ELF1P32519 619 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 COPB2P35606 906 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 PKN1Q16512 942 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 PTGISQ16647 500 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 CREG2Q8IUH2 290 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 MTMR8Q96EF0 704 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 FBXL5Q9UKA1 691 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 UTP11Q9Y3A2 253 aaKnown RBP12.93□□□□□ -0.34
CDH5-208ENST00000614547 POTEMA6NI47 508 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 EPHB6O15197 1021 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 VPS41P49754 854 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 CCDC38Q502W7 563 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 KCNV2Q8TDN2 545 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 MTRQ99707 1265 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 FAM167BQ9BTA0 163 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 ISCA1Q9BUE6 129 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 TACC3Q9Y6A5 838 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
CDH5-208ENST00000614547 FRMPD2Q68DX3 1309 aaPredicted RBP12.93□□□□□ -0.34
CDH5-208ENST00000614547 NRXN3Q9Y4C0 1643 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 A6NNZ2 444 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 RPS6KA5O75582 802 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 CALCRLQ16602 461 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 MAN2A1Q16706 1144 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 TUBB8Q3ZCM7 444 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 PARP9Q8IXQ6 854 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 CASKIN2Q8WXE0 1202 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 HVCN1Q96D96 273 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 CYFIP2Q96F07 1278 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 YY1AP1Q9H869 796 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 PCDHB13Q9Y5F0 798 aa12.93□□□□□ -0.34
CDH5-208ENST00000614547 KLRF2D3W0D1 207 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 CALRP27797 417 aaKnown RBP12.92□□□□□ -0.34
CDH5-208ENST00000614547 PDXDC2PQ6P474 469 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 CCDC26Q8TAB7 109 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 AENQ8WTP8 325 aaKnown RBP12.92□□□□□ -0.34
CDH5-208ENST00000614547 DNAJC7Q99615 494 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 MAP3K15Q6ZN16 1313 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 MROH5Q6ZUA9 1318 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 A0A1W2PQC6 194 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 F8W031 263 aaPredicted RBP12.92□□□□□ -0.34
CDH5-208ENST00000614547 KLRC1P26715 233 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 PICALMQ13492 652 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 LRRC14Q15048 493 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 RDH13Q8NBN7 331 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 RETREG2Q8NC44 543 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 EP400Q96L91 3159 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 PACSIN1Q9BY11 444 aa12.92□□□□□ -0.34
CDH5-208ENST00000614547 CELF4Q9BZC1 486 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms