RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 RHOBTB3O94955 611 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 GOLGA6DP0CG33 693 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 IDEP14735 1019 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 PRLRP16471 622 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 TRIM21P19474 475 aaKnown RBP12.46□□□□□ -0.41
ATF3-211ENST00000613954 FIGNQ5HY92 759 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 ZNF572Q7Z3I7 529 aaPredicted RBP12.46□□□□□ -0.41
ATF3-211ENST00000613954 GIMAP8Q8ND71 665 aaPredicted RBP12.46□□□□□ -0.41
ATF3-211ENST00000613954 SECISBP2LQ93073 1101 aaKnown RBP12.46□□□□□ -0.41
ATF3-211ENST00000613954 CAPZA3Q96KX2 299 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 TTYH3Q9C0H2 523 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 NHEJ1Q9H9Q4 299 aaPredicted RBP12.46□□□□□ -0.41
ATF3-211ENST00000613954 DDX4Q9NQI0 724 aaKnown RBP12.46□□□□□ -0.41
ATF3-211ENST00000613954 GOLGA6AQ9NYA3 693 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 SERPINA10Q9UK55 444 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.41
ATF3-211ENST00000613954 JRKLQ9Y4A0 524 aa12.46□□□□□ -0.41
ATF3-211ENST00000613954 YDJCA8MPS7 323 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 OPA1O60313 960 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 USO1O60763 962 aaKnown RBP12.45□□□□□ -0.42
ATF3-211ENST00000613954 SRGAP2O75044 1071 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 VAV2P52735 878 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 PPFIA1Q13136 1202 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 IL17AQ16552 155 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 AENQ8WTP8 325 aaKnown RBP12.45□□□□□ -0.42
ATF3-211ENST00000613954 CUEDC2Q9H467 287 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 YY1AP1Q9H869 796 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 JADE2Q9NQC1 790 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 SH3GLB2Q9NR46 395 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 RNF216Q9NWF9 866 aaPredicted RBP12.45□□□□□ -0.42
ATF3-211ENST00000613954 PIM2Q9P1W9 311 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 LAD1O00515 517 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 TACC1O75410 805 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 BRD2P25440 801 aaKnown RBP12.45□□□□□ -0.42
ATF3-211ENST00000613954 KIF5BP33176 963 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 SPA17Q15506 151 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 DTHD1Q6ZMT9 781 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 TADA2BQ86TJ2 420 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 LARGE2Q8N3Y3 721 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 RASSF8Q8NHQ8 419 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 NEDD1Q8NHV4 660 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 ZFP91Q96JP5 570 aaPredicted RBP12.45□□□□□ -0.42
ATF3-211ENST00000613954 TUBGCP2Q9BSJ2 902 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 MAPK8IP1Q9UQF2 711 aa12.45□□□□□ -0.42
ATF3-211ENST00000613954 MYO3BQ8WXR4 1341 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 TRIM49BA6NDI0 452 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 AGPSO00116 658 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 EBAG9O00559 213 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 RBM5P52756 815 aaKnown RBP eCLIP12.44□□□□□ -0.42
ATF3-211ENST00000613954 GABPAQ06546 454 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
ATF3-211ENST00000613954 PACS2Q86VP3 889 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 SRBD1Q8N5C6 995 aaKnown RBP12.44□□□□□ -0.42
ATF3-211ENST00000613954 C4orf32Q8N8J7 132 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 PNMA1Q8ND90 353 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 CCSER1Q9C0I3 900 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 PSME4Q14997 1843 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 PLIN4Q96Q06 1357 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 SHTN1A0MZ66 631 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 B4DLN1 442 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 HLA-DOAP06340 250 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 UBA7P41226 1012 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 GTF2A1P52655 376 aaPredicted RBP12.44□□□□□ -0.42
ATF3-211ENST00000613954 TBC1D8BQ0IIM8 1120 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 FKBP15Q5T1M5 1219 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 TTI2Q6NXR4 508 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 EMBQ6PCB8 327 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 BLIDQ8IZY5 108 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 CSGALNACT2Q8N6G5 542 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 CCDC42Q96M95 316 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 ZNF277Q9NRM2 450 aaPredicted RBP12.44□□□□□ -0.42
ATF3-211ENST00000613954 KBTBD4Q9NVX7 518 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 SWAP70Q9UH65 585 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 SNX12Q9UMY4 172 aa12.44□□□□□ -0.42
ATF3-211ENST00000613954 KLRC4O43908 158 aa12.43□□□□□ -0.42
ATF3-211ENST00000613954 EPB41P11171 864 aaKnown RBP12.43□□□□□ -0.42
ATF3-211ENST00000613954 TCP1P17987 556 aaKnown RBP12.43□□□□□ -0.42
ATF3-211ENST00000613954 CCNE1P24864 410 aa12.43□□□□□ -0.42
ATF3-211ENST00000613954 EPHB4P54760 987 aa12.43□□□□□ -0.42
ATF3-211ENST00000613954 GRM4Q14833 912 aa12.43□□□□□ -0.42
ATF3-211ENST00000613954 R3HDM1Q15032 1099 aaKnown RBP12.43□□□□□ -0.42
ATF3-211ENST00000613954 DALRD3Q5D0E6 543 aaKnown RBP12.43□□□□□ -0.42
ATF3-211ENST00000613954 ALS2CLQ60I27 953 aa12.43□□□□□ -0.42
ATF3-211ENST00000613954 TEX2Q8IWB9 1127 aa12.43□□□□□ -0.42
ATF3-211ENST00000613954 SUGP1Q8IWZ8 645 aaKnown RBP12.43□□□□□ -0.42
ATF3-211ENST00000613954 ALS2CR12Q96Q35 445 aa12.43□□□□□ -0.42
ATF3-211ENST00000613954 ERGIC2Q96RQ1 377 aa12.43□□□□□ -0.42
ATF3-211ENST00000613954 IDI2Q9BXS1 227 aa12.43□□□□□ -0.42
ATF3-211ENST00000613954 CAPS2Q9BXY5 557 aa12.43□□□□□ -0.42
ATF3-211ENST00000613954 LACRTQ9GZZ8 138 aa12.43□□□□□ -0.42
ATF3-211ENST00000613954 SERPINB13Q9UIV8 391 aa12.43□□□□□ -0.42
ATF3-211ENST00000613954 PCDHA4Q9UN74 947 aa12.43□□□□□ -0.42
ATF3-211ENST00000613954 CLSTN1O94985 981 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 TNFRSF8P28908 595 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 HNRNPH3P31942 346 aaKnown RBP12.42□□□□□ -0.42
ATF3-211ENST00000613954 GNAQP50148 359 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 IRAK1P51617 712 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 PMS1P54277 932 aaKnown RBP12.42□□□□□ -0.42
ATF3-211ENST00000613954 NFIAQ12857 509 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 NAALADL2Q58DX5 795 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms