RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 FBXO28Q9NVF7 368 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 USP25Q9UHP3 1055 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 PCDHB3Q9Y5E6 796 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 ZHX2Q9Y6X8 837 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 SSC5DA1L4H1 1573 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 SMCHD1A6NHR9 2005 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 IQCA1LA6NCM1 817 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 PIK3CDO00329 1044 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 EDIL3O43854 480 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 PPP1R12BO60237 982 aaPredicted RBP10.09□□□□□ -0.79
CCDC47-207ENST00000612558 VCAM1P19320 739 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 TXLNAP40222 546 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 ZRSR1Q15695 479 aaKnown RBP10.09□□□□□ -0.79
CCDC47-207ENST00000612558 ANO6Q4KMQ2 910 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 PDILTQ8N807 584 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 FAM200AQ8TCP9 573 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 C12orf42Q96LP6 360 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 AK8Q96MA6 479 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 TANGO6Q9C0B7 1094 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 ANO10Q9NW15 660 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 SERTAD1Q9UHV2 236 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 FZD1Q9UP38 647 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 MRPL11Q9Y3B7 192 aaKnown RBP10.09□□□□□ -0.79
CCDC47-207ENST00000612558 MYH7BA7E2Y1 1941 aa10.09□□□□□ -0.79
CCDC47-207ENST00000612558 ABCB11O95342 1321 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 SPDYE3A6NKU9 549 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 ADM5C9JUS6 153 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 OPLAHO14841 1288 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 FLOT1O75955 427 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 ICAM1P05362 532 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 SLFN14P0C7P3 912 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 FDX1P10109 184 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 NF2P35240 595 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 MDM2Q00987 491 aaPredicted RBP10.08□□□□□ -0.8
CCDC47-207ENST00000612558 PRKG1Q13976 671 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 MOXD1Q6UVY6 613 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 LDHDQ86WU2 507 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 IQUBQ8NA54 791 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 ERCC4Q92889 916 aaPredicted RBP10.08□□□□□ -0.8
CCDC47-207ENST00000612558 MTMR9Q96QG7 549 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 ANO3Q9BYT9 981 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 RPAP3Q9H6T3 665 aaPredicted RBP10.08□□□□□ -0.8
CCDC47-207ENST00000612558 TUBE1Q9UJT0 475 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 PNMA2Q9UL42 364 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 AFG3L2Q9Y4W6 797 aa10.08□□□□□ -0.8
CCDC47-207ENST00000612558 SCN4AP35499 1836 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 CYP3A7-CYP3A51PA0A087WV96 503 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 A0A087X0B3 334 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 ACTN4O43707 911 aaKnown RBP10.07□□□□□ -0.8
CCDC47-207ENST00000612558 TDP2O95551 362 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 CYP3A7P24462 503 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 ZNF165P49910 485 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 POSTNQ15063 836 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 CALCRLQ16602 461 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.07□□□□□ -0.8
CCDC47-207ENST00000612558 PNMA8AQ86V59 439 aaPredicted RBP10.07□□□□□ -0.8
CCDC47-207ENST00000612558 CEP57L1Q8IYX8 460 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 RBM46Q8TBY0 533 aaKnown RBP10.07□□□□□ -0.8
CCDC47-207ENST00000612558 CRYGNQ8WXF5 182 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 DHX58Q96C10 678 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 CCSER1Q9C0I3 900 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 DNAJC25Q9H1X3 360 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 TAF1DQ9H5J8 278 aaPredicted RBP10.07□□□□□ -0.8
CCDC47-207ENST00000612558 SLC38A10Q9HBR0 1119 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 TMOD4Q9NZQ9 345 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 DDX25Q9UHL0 483 aaKnown RBP10.07□□□□□ -0.8
CCDC47-207ENST00000612558 PPP1R9AQ9ULJ8 1098 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 CSADQ9Y600 493 aa10.07□□□□□ -0.8
CCDC47-207ENST00000612558 GCOM1H8Y6P7 765 aaPredicted RBP10.06□□□□□ -0.8
CCDC47-207ENST00000612558 SLC37A4O43826 429 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 ZBED4O75132 1171 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 CFBP00751 764 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 POLR2MP0CAP2 368 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 HOXA13P31271 388 aaPredicted RBP10.06□□□□□ -0.8
CCDC47-207ENST00000612558 SREBF1P36956 1147 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 UBA7P41226 1012 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 IREB2P48200 963 aaKnown RBP10.06□□□□□ -0.8
CCDC47-207ENST00000612558 HMGCS2P54868 508 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 NLRP12P59046 1061 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 ARHGAP4P98171 946 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 PNOCQ13519 176 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 DGKZQ13574 1117 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 VGLL4Q14135 290 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 PDIA5Q14554 519 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 TMEM266Q2M3C6 531 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 DLK2Q6UY11 383 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 IGSF22Q8N9C0 903 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 CDCA5Q96FF9 252 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 P2RX7Q99572 595 aaKnown RBP10.06□□□□□ -0.8
CCDC47-207ENST00000612558 RAB34Q9BZG1 259 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 NAT10Q9H0A0 1025 aaKnown RBP10.06□□□□□ -0.8
CCDC47-207ENST00000612558 CBX8Q9HC52 389 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 NPDC1Q9NQX5 325 aaPredicted RBP10.06□□□□□ -0.8
CCDC47-207ENST00000612558 CCDC39Q9UFE4 941 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 CCPG1Q9ULG6 757 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 CTDP1Q9Y5B0 961 aaPredicted RBP10.06□□□□□ -0.8
CCDC47-207ENST00000612558 SNCAIPQ9Y6H5 919 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 PHIPQ8WWQ0 1821 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 ZNF536O15090 1300 aa10.06□□□□□ -0.8
CCDC47-207ENST00000612558 POTECB2RU33 542 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms