RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 PTGISQ16647 500 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 PTPN21Q16825 1174 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 ST3GAL2Q16842 350 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 CCDC158Q5M9N0 1113 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 SMRP1Q8NCR6 262 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 MORC4Q8TE76 937 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 PHF7Q9BWX1 381 aaPredicted RBP8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 KANSL2Q9H9L4 492 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 VTA1Q9NP79 307 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 A1CFQ9NQ94 594 aaKnown RBP8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 GPHNQ9NQX3 736 aaPredicted RBP8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 NOD1Q9Y239 953 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 MYO10Q9HD67 2058 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 RALGAPA2Q2PPJ7 1873 aa8.64□□□□□ -1.03
PTCHD3P1-201ENST00000612350 RBM47A0AV96 593 aaKnown RBP8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 C5orf67F2Z3F1 127 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 IPO8O15397 1037 aaKnown RBP8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 LGR5O75473 907 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 LINC00271P0C7V0 271 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 CKBP12277 381 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 CDK8P49336 464 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 CPT1AP50416 773 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 RARSP54136 660 aaKnown RBP8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 OAZ1P54368 228 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 MBTPS1Q14703 1052 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 GDF6Q6KF10 455 aaPredicted RBP8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 CCDC155Q8N6L0 562 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 SSH1Q8WYL5 1049 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 ARHGAP45Q92619 1136 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 LMAN2LQ9H0V9 348 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 IGFLR1Q9H665 355 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 DCP1AQ9NPI6 582 aaPredicted RBP8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 SMC4Q9NTJ3 1288 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 RALYQ9UKM9 306 aaKnown RBP8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 HDAC5Q9UQL6 1122 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 PCDHGC5Q9Y5F6 944 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 ZFHX4Q86UP3 3567 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 SPTBN2O15020 2390 aa8.63□□□□□ -1.03
PTCHD3P1-201ENST00000612350 LCTP09848 1927 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 A6NJR5 290 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 F5H6K3 240 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 RAD21O60216 631 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 KPNA6O60684 536 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 NDUFB10O96000 172 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 AMHP03971 560 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 KLRC3Q07444 240 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 CAMK1Q14012 370 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 TMED8Q6PL24 325 aaPredicted RBP8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 SESTD1Q86VW0 696 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 KIAA2013Q8IYS2 634 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 MYOCDQ8IZQ8 938 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 SDR42E1Q8WUS8 393 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 TOP1MTQ969P6 601 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 RPGRIP1Q96KN7 1286 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 MEIS3Q99687 375 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 WDR11Q9BZH6 1224 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 ANTXR1Q9H6X2 564 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 ACAD9Q9H845 621 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 GPR108Q9NPR9 543 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 INCENPQ9NQS7 918 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 HOMER2Q9NSB8 354 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 USP15Q9Y4E8 981 aaPredicted RBP8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 ZNF292O60281 2723 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 CHD6Q8TD26 2715 aa8.62□□□□□ -1.03
PTCHD3P1-201ENST00000612350 MAGEB6P1A0A0J9YX57 407 aa8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 RB1P06400 928 aa8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 NDUFV1P49821 464 aa8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 LSM11P83369 360 aaKnown RBP eCLIP8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 TRIM71Q2Q1W2 868 aaKnown RBP8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 TNNI3KQ59H18 835 aa8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 DBF4BQ8NFT6 615 aa8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 OR6J1Q8NGC5 347 aa8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 KIFC2Q96AC6 838 aa8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 PURBQ96QR8 312 aaKnown RBP8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 CRNKL1Q9BZJ0 848 aaKnown RBP8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 API5Q9BZZ5 524 aaKnown RBP8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 LHX6Q9UPM6 363 aa8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 COG6Q9Y2V7 657 aa8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 FPGT-TNNI3KV9GXZ4 949 aa8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 DNAH14Q0VDD8 3507 aa8.61□□□□□ -1.03
PTCHD3P1-201ENST00000612350 OTOGLQ3ZCN5 2332 aa8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 GREB1LQ9C091 1923 aaPredicted RBP8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 GLP2RO95838 553 aa8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 ARP10275 920 aa8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 ATF7P17544 494 aaPredicted RBP8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 BMPR1AP36894 532 aa8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 FOXK1P85037 733 aa8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 G3BP1Q13283 466 aaKnown RBP eCLIP8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 ZNF618Q5T7W0 954 aa8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 C12orf60Q5U649 245 aa8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 C16orf86Q6ZW13 317 aa8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 EFHBQ8N7U6 833 aa8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 SUSD6Q92537 303 aa8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 WNT8BQ93098 351 aa8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 YME1L1Q96TA2 773 aa8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 RNF146Q9NTX7 359 aa8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 CYP39A1Q9NYL5 469 aa8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 CTDP1Q9Y5B0 961 aaPredicted RBP8.6□□□□□ -1.03
PTCHD3P1-201ENST00000612350 BAZ2AQ9UIF9 1905 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms