RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 HOXA7P31268 230 aaPredicted RBP9.43□□□□□ -0.9
TMCO1-208ENST00000612311 CACNB3P54284 484 aa9.43□□□□□ -0.9
TMCO1-208ENST00000612311 CYP27A1Q02318 531 aa9.43□□□□□ -0.9
TMCO1-208ENST00000612311 NFIXQ14938 502 aa9.43□□□□□ -0.9
TMCO1-208ENST00000612311 FAM186BQ8IYM0 893 aa9.43□□□□□ -0.9
TMCO1-208ENST00000612311 MB21D1Q8N884 522 aa9.43□□□□□ -0.9
TMCO1-208ENST00000612311 PLEKHG2Q9H7P9 1386 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 MAP2P11137 1827 aaKnown RBP9.42□□□□□ -0.9
TMCO1-208ENST00000612311 FOXN1O15353 648 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 GAS8O95995 478 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 AFPP02771 609 aaKnown RBP9.42□□□□□ -0.9
TMCO1-208ENST00000612311 LIG4P49917 911 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 CEP128Q6ZU80 1094 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 TMEM179Q6ZVK1 233 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 KCNB2Q92953 911 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 NACC1Q96RE7 527 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 FEZ2Q9UHY8 353 aaPredicted RBP9.42□□□□□ -0.9
TMCO1-208ENST00000612311 FDPSP14324 419 aaKnown RBP9.42□□□□□ -0.9
TMCO1-208ENST00000612311 FERP16591 822 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 IQCB1Q15051 598 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 NEDD1Q8NHV4 660 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 MASTLQ96GX5 879 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 HINFPQ9BQA5 517 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 C1orf112Q9NSG2 853 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 CSADQ9Y600 493 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 A0A0G2JLW4 131 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 CCDC151A5D8V7 595 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 H0YCG3 227 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 CTDNEP1O95476 244 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 DLATP10515 647 aaKnown RBP9.42□□□□□ -0.9
TMCO1-208ENST00000612311 PSMC2P35998 433 aaKnown RBP9.42□□□□□ -0.9
TMCO1-208ENST00000612311 EIF4A3P38919 411 aaKnown RBP9.42□□□□□ -0.9
TMCO1-208ENST00000612311 C12orf60Q5U649 245 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 DHX40Q8IX18 779 aaKnown RBP9.42□□□□□ -0.9
TMCO1-208ENST00000612311 VTI1AQ96AJ9 217 aa9.42□□□□□ -0.9
TMCO1-208ENST00000612311 CLIC2O15247 247 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 ATP8B1O43520 1251 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 KRT19P08727 400 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 PRCPP42785 496 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 C6orf163Q5TEZ5 329 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 UNC13DQ70J99 1090 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 ANKRD35Q8N283 1001 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 SRBD1Q8N5C6 995 aaKnown RBP9.41□□□□□ -0.9
TMCO1-208ENST00000612311 MAIP1Q8WWC4 291 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 MED4Q9NPJ6 270 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 BARHL2Q9NY43 387 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 TRIM49BA6NDI0 452 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 POTEMA6NI47 508 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 LGALS16A8MUM7 142 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 ZBTB5O15062 677 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 GH2P01242 217 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 ATP2C1P98194 919 aaPredicted RBP9.41□□□□□ -0.9
TMCO1-208ENST00000612311 PPARDQ03181 441 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 DMP1Q13316 513 aaPredicted RBP9.41□□□□□ -0.9
TMCO1-208ENST00000612311 SMIM5Q71RC9 77 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 PODNQ7Z5L7 613 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 METTL16Q86W50 562 aaKnown RBP9.41□□□□□ -0.9
TMCO1-208ENST00000612311 ZNF408Q9H9D4 720 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 NHEJ1Q9H9Q4 299 aaPredicted RBP9.41□□□□□ -0.9
TMCO1-208ENST00000612311 MLXIPQ9HAP2 919 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 TXNDC16Q9P2K2 825 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 FBXO2Q9UK22 296 aaPredicted RBP9.41□□□□□ -0.9
TMCO1-208ENST00000612311 SEC31AO94979 1220 aaKnown RBP9.41□□□□□ -0.9
TMCO1-208ENST00000612311 CRKP46108 304 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 AOC3Q16853 763 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 CCDC63Q8NA47 563 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 MARCH10Q8NA82 808 aaPredicted RBP9.41□□□□□ -0.9
TMCO1-208ENST00000612311 PAGR1Q9BTK6 254 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 BHMT2Q9H2M3 363 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 EPB41L4AQ9HCS5 686 aaPredicted RBP9.41□□□□□ -0.9
TMCO1-208ENST00000612311 HOXA13P31271 388 aaPredicted RBP9.41□□□□□ -0.9
TMCO1-208ENST00000612311 MYL7Q01449 175 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 ZSCAN26Q16670 478 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 TXNRD1Q16881 649 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 CEP85LQ5SZL2 805 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 POMGNT1Q8WZA1 660 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 RASSF4Q9H2L5 321 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 PDE11AQ9HCR9 933 aa9.41□□□□□ -0.9
TMCO1-208ENST00000612311 CTNNA1P35221 906 aaKnown RBP9.4□□□□□ -0.9
TMCO1-208ENST00000612311 GUCY2DQ02846 1103 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 AP3B2Q13367 1082 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 CCDC93Q567U6 631 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 STAG2Q8N3U4 1231 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 SREK1Q8WXA9 508 aaKnown RBP9.4□□□□□ -0.9
TMCO1-208ENST00000612311 JRKLQ9Y4A0 524 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 PP2D1A8MPX8 630 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 NTSR2O95665 410 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 LMNB1P20700 586 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 KIF11P52732 1056 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 SLC8A3P57103 927 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 ADAT2Q7Z6V5 191 aaKnown RBP9.4□□□□□ -0.9
TMCO1-208ENST00000612311 FAM133AQ8N9E0 248 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 ATP6V0A1Q93050 837 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 PARD6BQ9BYG5 372 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 DPH5Q9H2P9 285 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 PARVGQ9HBI0 331 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 SENP2Q9HC62 589 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 PARP2Q9UGN5 583 aa9.4□□□□□ -0.9
TMCO1-208ENST00000612311 MKRN1Q9UHC7 482 aaKnown RBP9.4□□□□□ -0.9
TMCO1-208ENST00000612311 ARHGEF28Q8N1W1 1705 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms