RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 NTRK3Q16288 839 aa29.91■■■□□ 2.38
VEGFA-226ENST00000611736 PFKFB3Q16875 520 aaPredicted RBP29.91■■■□□ 2.38
VEGFA-226ENST00000611736 LY6KQ17RY6 165 aa29.91■■■□□ 2.38
VEGFA-226ENST00000611736 TRIM60Q495X7 471 aa29.91■■■□□ 2.38
VEGFA-226ENST00000611736 PPP1R18Q6NYC8 613 aa29.91■■■□□ 2.38
VEGFA-226ENST00000611736 CCDC62Q6P9F0 684 aa29.91■■■□□ 2.38
VEGFA-226ENST00000611736 VTI1AQ96AJ9 217 aa29.91■■■□□ 2.38
VEGFA-226ENST00000611736 GLT1D1Q96MS3 346 aa29.91■■■□□ 2.38
VEGFA-226ENST00000611736 SLC26A6Q9BXS9 759 aa29.91■■■□□ 2.38
VEGFA-226ENST00000611736 hCG_1984214I3L0E3 225 aa29.9■■■□□ 2.38
VEGFA-226ENST00000611736 ZEB2O60315 1214 aa29.9■■■□□ 2.38
VEGFA-226ENST00000611736 SCG2P13521 617 aa29.9■■■□□ 2.38
VEGFA-226ENST00000611736 SNX17Q15036 470 aa29.9■■■□□ 2.38
VEGFA-226ENST00000611736 ZNF713Q8N859 430 aaPredicted RBP29.9■■■□□ 2.38
VEGFA-226ENST00000611736 MRVI1Q9Y6F6 885 aa29.9■■■□□ 2.38
VEGFA-226ENST00000611736 PRPF3O43395 683 aaKnown RBP29.89■■■□□ 2.38
VEGFA-226ENST00000611736 IFNAR1P17181 557 aa29.89■■■□□ 2.38
VEGFA-226ENST00000611736 SYN1P17600 705 aa29.89■■■□□ 2.38
VEGFA-226ENST00000611736 ADCY7P51828 1080 aa29.89■■■□□ 2.38
VEGFA-226ENST00000611736 CXCL17Q6UXB2 119 aa29.89■■■□□ 2.38
VEGFA-226ENST00000611736 RBM27Q9P2N5 1060 aaKnown RBP29.89■■■□□ 2.38
VEGFA-226ENST00000611736 CPLX1O14810 134 aa29.88■■■□□ 2.37
VEGFA-226ENST00000611736 RGS20O76081 388 aa29.88■■■□□ 2.37
VEGFA-226ENST00000611736 AK2P54819 239 aa29.88■■■□□ 2.37
VEGFA-226ENST00000611736 PKN1Q16512 942 aa29.88■■■□□ 2.37
VEGFA-226ENST00000611736 RNF26Q9BY78 433 aaPredicted RBP29.88■■■□□ 2.37
VEGFA-226ENST00000611736 ALDH8A1Q9H2A2 487 aaPredicted RBP29.88■■■□□ 2.37
VEGFA-226ENST00000611736 RIC8AQ9NPQ8 531 aa29.88■■■□□ 2.37
VEGFA-226ENST00000611736 PCDH10Q9P2E7 1040 aa29.88■■■□□ 2.37
VEGFA-226ENST00000611736 TPCN1Q9ULQ1 816 aa29.88■■■□□ 2.37
VEGFA-226ENST00000611736 RANBP2P49792 3224 aaKnown RBP29.87■■■□□ 2.37
VEGFA-226ENST00000611736 SMCO2A6NFE2 343 aa29.87■■■□□ 2.37
VEGFA-226ENST00000611736 SPDYE3A6NKU9 549 aa29.87■■■□□ 2.37
VEGFA-226ENST00000611736 CPT1AP50416 773 aa29.87■■■□□ 2.37
VEGFA-226ENST00000611736 MRPS9P82933 396 aaKnown RBP29.87■■■□□ 2.37
VEGFA-226ENST00000611736 DDX41Q9UJV9 622 aaKnown RBP29.87■■■□□ 2.37
VEGFA-226ENST00000611736 GH1P01241 217 aa29.86■■■□□ 2.37
VEGFA-226ENST00000611736 NEK4P51957 841 aa29.86■■■□□ 2.37
VEGFA-226ENST00000611736 ANKRD1Q15327 319 aa29.86■■■□□ 2.37
VEGFA-226ENST00000611736 C1orf53Q5VUE5 145 aa29.86■■■□□ 2.37
VEGFA-226ENST00000611736 RTEL1Q9NZ71 1219 aa29.86■■■□□ 2.37
VEGFA-226ENST00000611736 ELP1O95163 1332 aa29.86■■■□□ 2.37
VEGFA-226ENST00000611736 PQBP1O60828 265 aaKnown RBP29.85■■■□□ 2.37
VEGFA-226ENST00000611736 SLC34A2O95436 690 aa29.85■■■□□ 2.37
VEGFA-226ENST00000611736 MYL3P08590 195 aa29.85■■■□□ 2.37
VEGFA-226ENST00000611736 TLE2Q04725 743 aa29.85■■■□□ 2.37
VEGFA-226ENST00000611736 BRDTQ58F21 947 aaPredicted RBP29.85■■■□□ 2.37
VEGFA-226ENST00000611736 SLKQ9H2G2 1235 aaPredicted RBP29.85■■■□□ 2.37
VEGFA-226ENST00000611736 PCDHA6Q9UN73 950 aa29.85■■■□□ 2.37
VEGFA-226ENST00000611736 PCDHA8Q9Y5H6 950 aa29.85■■■□□ 2.37
VEGFA-226ENST00000611736 MYH7BA7E2Y1 1941 aa29.84■■■□□ 2.37
VEGFA-226ENST00000611736 A0A0U1RQG5 324 aaPredicted RBP29.84■■■□□ 2.37
VEGFA-226ENST00000611736 ARHGAP1Q07960 439 aa29.84■■■□□ 2.37
VEGFA-226ENST00000611736 SSRP1Q08945 709 aaKnown RBP29.84■■■□□ 2.37
VEGFA-226ENST00000611736 HABP4Q5JVS0 413 aaKnown RBP29.84■■■□□ 2.37
VEGFA-226ENST00000611736 PCNX4Q63HM2 1172 aa29.84■■■□□ 2.37
VEGFA-226ENST00000611736 CPLX2Q6PUV4 134 aaKnown RBP29.84■■■□□ 2.37
VEGFA-226ENST00000611736 TRIM22Q8IYM9 498 aa29.84■■■□□ 2.37
VEGFA-226ENST00000611736 AFG1LQ8WV93 481 aa29.84■■■□□ 2.37
VEGFA-226ENST00000611736 SORBS3O60504 671 aa29.83■■■□□ 2.37
VEGFA-226ENST00000611736 STAM2O75886 525 aa29.83■■■□□ 2.37
VEGFA-226ENST00000611736 CABYRO75952 493 aa29.83■■■□□ 2.37
VEGFA-226ENST00000611736 SCRN1Q12765 414 aa29.83■■■□□ 2.37
VEGFA-226ENST00000611736 GNPTABQ3T906 1256 aa29.83■■■□□ 2.37
VEGFA-226ENST00000611736 KCNV1Q6PIU1 500 aa29.83■■■□□ 2.37
VEGFA-226ENST00000611736 PGBD1Q96JS3 809 aa29.83■■■□□ 2.37
VEGFA-226ENST00000611736 GLT8D2Q9H1C3 349 aa29.83■■■□□ 2.37
VEGFA-226ENST00000611736 PRDM5Q9NQX1 630 aaPredicted RBP29.83■■■□□ 2.37
VEGFA-226ENST00000611736 POLR3EQ9NVU0 708 aa29.83■■■□□ 2.37
VEGFA-226ENST00000611736 TRIOBPQ9H2D6 2365 aa29.83■■■□□ 2.37
VEGFA-226ENST00000611736 A6NJR5 290 aa29.82■■■□□ 2.36
VEGFA-226ENST00000611736 PFKFB2O60825 505 aa29.82■■■□□ 2.36
VEGFA-226ENST00000611736 XRRA1Q6P2D8 792 aa29.82■■■□□ 2.36
VEGFA-226ENST00000611736 CHRDL2Q6WN34 429 aa29.82■■■□□ 2.36
VEGFA-226ENST00000611736 CCDC12Q8WUD4 166 aaPredicted RBP29.82■■■□□ 2.36
VEGFA-226ENST00000611736 INPP4AQ96PE3 977 aaPredicted RBP29.82■■■□□ 2.36
VEGFA-226ENST00000611736 C22orf23Q9BZE7 217 aa29.82■■■□□ 2.36
VEGFA-226ENST00000611736 EHMT1Q9H9B1 1298 aa29.82■■■□□ 2.36
VEGFA-226ENST00000611736 TMEM260Q9NX78 707 aa29.82■■■□□ 2.36
VEGFA-226ENST00000611736 GTF3C3Q9Y5Q9 886 aa29.82■■■□□ 2.36
VEGFA-226ENST00000611736 ARVCFO00192 962 aa29.81■■■□□ 2.36
VEGFA-226ENST00000611736 UBA1P22314 1058 aaKnown RBP29.81■■■□□ 2.36
VEGFA-226ENST00000611736 PSMC6P62333 389 aa29.81■■■□□ 2.36
VEGFA-226ENST00000611736 DHX37Q8IY37 1157 aaKnown RBP29.81■■■□□ 2.36
VEGFA-226ENST00000611736 VPS54Q9P1Q0 977 aa29.81■■■□□ 2.36
VEGFA-226ENST00000611736 PRKAG2Q9UGJ0 569 aa29.81■■■□□ 2.36
VEGFA-226ENST00000611736 COLQQ9Y215 455 aaPredicted RBP29.81■■■□□ 2.36
VEGFA-226ENST00000611736 GGPS1O95749 300 aa29.8■■■□□ 2.36
VEGFA-226ENST00000611736 PURAQ00577 322 aaKnown RBP29.8■■■□□ 2.36
VEGFA-226ENST00000611736 SP2Q02086 613 aa29.8■■■□□ 2.36
VEGFA-226ENST00000611736 TEX2Q8IWB9 1127 aa29.8■■■□□ 2.36
VEGFA-226ENST00000611736 ANO3Q9BYT9 981 aa29.8■■■□□ 2.36
VEGFA-226ENST00000611736 ZMYND12Q9H0C1 365 aa29.8■■■□□ 2.36
VEGFA-226ENST00000611736 C6orf50Q9HD87 102 aa29.8■■■□□ 2.36
VEGFA-226ENST00000611736 PDLIM7Q9NR12 457 aa29.8■■■□□ 2.36
VEGFA-226ENST00000611736 ESYT2A0FGR8 921 aa29.79■■■□□ 2.36
VEGFA-226ENST00000611736 FOSP01100 380 aaPredicted RBP29.79■■■□□ 2.36
VEGFA-226ENST00000611736 MMP3P08254 477 aa29.79■■■□□ 2.36
VEGFA-226ENST00000611736 TGFB3P10600 412 aa29.79■■■□□ 2.36
VEGFA-226ENST00000611736 SEMA3FQ13275 785 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms