RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 COBLO75128 1261 aa18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 NR3C2P08235 984 aa18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 EIF2AK2P19525 551 aaKnown RBP18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 EDNRBP24530 442 aa18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 ALDH5A1P51649 535 aaPredicted RBP18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 LACTBP83111 547 aaPredicted RBP18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 SP3Q02447 781 aa18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 NIPA1Q7RTP0 329 aa18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 ZNF467Q7Z7K2 595 aaPredicted RBP18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 TMEM87AQ8NBN3 555 aa18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 MORC4Q8TE76 937 aa18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 LEO1Q8WVC0 666 aaPredicted RBP18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 USP6NLQ92738 828 aa18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 GJD2Q9UKL4 321 aa18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 DOCK3Q8IZD9 2030 aa18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 ASTN1O14525 1302 aa18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 LCTP09848 1927 aa18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 MEIS1O00470 390 aa18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 LAD1O00515 517 aa18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 PPP6R2O75170 966 aa18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 STAM2O75886 525 aa18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 TDP2O95551 362 aa18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 PGK2P07205 417 aa18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 HOXC6P09630 235 aa18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 NCLP19338 710 aaKnown RBP18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 MCM7P33993 719 aa18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 MRPS9P82933 396 aaKnown RBP18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 CSPP1Q1MSJ5 1256 aa18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 CEP55Q53EZ4 464 aa18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 IL31RAQ8NI17 732 aa18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 KCNG4Q8TDN1 519 aa18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 UBIAD1Q9Y5Z9 338 aa18.13■□□□□ 0.49
CLTCL1-207ENST00000611723 FAM86B1E9PN63 330 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 GPR25O00155 361 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 SPTLC2O15270 562 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 FAM86B2P0C5J1 330 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 CTGFP29279 349 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 CCND2P30279 289 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 ZNF76P36508 570 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 FCGRTP55899 365 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 UBXN2AP68543 259 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 ATP2C1P98194 919 aaPredicted RBP18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 CEBPZQ03701 1054 aaKnown RBP18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 MAP2K5Q13163 448 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 PTGDRQ13258 359 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 STK38Q15208 465 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 PKN2Q16513 984 aaKnown RBP18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 ARL6IP4Q66PJ3 421 aaKnown RBP18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 LENG9Q96B70 501 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 SPATA32Q96LK8 384 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 MTMR9Q96QG7 549 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 MPHOSPH6Q99547 160 aaKnown RBP18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 MXRA8Q9BRK3 442 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 SLC5A4Q9NY91 659 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 DDX25Q9UHL0 483 aaKnown RBP18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 ELP1O95163 1332 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 PLXNB2O15031 1838 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 ZNF236Q9UL36 1845 aa18.12■□□□□ 0.49
CLTCL1-207ENST00000611723 IGLV3-22A0A075B6J6 115 aa18.11■□□□□ 0.49
CLTCL1-207ENST00000611723 ASB14A6NK59 587 aa18.11■□□□□ 0.49
CLTCL1-207ENST00000611723 TBX3O15119 743 aa18.11■□□□□ 0.49
CLTCL1-207ENST00000611723 FIBPO43427 364 aa18.11■□□□□ 0.49
CLTCL1-207ENST00000611723 NEMFO60524 1076 aa18.11■□□□□ 0.49
CLTCL1-207ENST00000611723 EIF3JO75822 258 aaKnown RBP18.11■□□□□ 0.49
CLTCL1-207ENST00000611723 PSMC4P43686 418 aa18.11■□□□□ 0.49
CLTCL1-207ENST00000611723 STXBP2Q15833 593 aa18.11■□□□□ 0.49
CLTCL1-207ENST00000611723 DPP9Q86TI2 863 aa18.11■□□□□ 0.49
CLTCL1-207ENST00000611723 MSL3Q8N5Y2 521 aaKnown RBP18.11■□□□□ 0.49
CLTCL1-207ENST00000611723 SOCS4Q8WXH5 440 aa18.11■□□□□ 0.49
CLTCL1-207ENST00000611723 NUDT12Q9BQG2 462 aa18.11■□□□□ 0.49
CLTCL1-207ENST00000611723 TMEM60Q9H2L4 133 aa18.11■□□□□ 0.49
CLTCL1-207ENST00000611723 JADE2Q9NQC1 790 aa18.11■□□□□ 0.49
CLTCL1-207ENST00000611723 TNPO2O14787 897 aaKnown RBP18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 MAFGO15525 162 aa18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 SLC37A4O43826 429 aa18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 MYCLP12524 364 aaPredicted RBP18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 ITGB5P18084 799 aa18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 PRPHP41219 470 aa18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 KIF22Q14807 665 aa18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 FBXO46Q6PJ61 603 aaPredicted RBP18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 MAMDC4Q6UXC1 1216 aa18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 CYP2W1Q8TAV3 490 aa18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 TRIM47Q96LD4 638 aa18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 INPP4AQ96PE3 977 aaPredicted RBP18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 GDPD2Q9HCC8 539 aa18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 KCNMB3Q9NPA1 279 aa18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 SRPRBQ9Y5M8 271 aaKnown RBP18.1■□□□□ 0.49
CLTCL1-207ENST00000611723 MCM4P33991 863 aa18.09■□□□□ 0.49
CLTCL1-207ENST00000611723 RGS2P41220 211 aa18.09■□□□□ 0.49
CLTCL1-207ENST00000611723 SETQ01105 290 aaPredicted RBP18.09■□□□□ 0.49
CLTCL1-207ENST00000611723 PRR16Q569H4 304 aa18.09■□□□□ 0.49
CLTCL1-207ENST00000611723 NLRX1Q86UT6 975 aa18.09■□□□□ 0.49
CLTCL1-207ENST00000611723 PLA2G4DQ86XP0 818 aa18.09■□□□□ 0.49
CLTCL1-207ENST00000611723 POTEDQ86YR6 584 aa18.09■□□□□ 0.49
CLTCL1-207ENST00000611723 NPLOC4Q8TAT6 608 aa18.09■□□□□ 0.49
CLTCL1-207ENST00000611723 FERMT2Q96AC1 680 aa18.09■□□□□ 0.49
CLTCL1-207ENST00000611723 MAML3Q96JK9 1138 aa18.09■□□□□ 0.49
CLTCL1-207ENST00000611723 FAM20AQ96MK3 541 aa18.09■□□□□ 0.49
CLTCL1-207ENST00000611723 MGAMO43451 1857 aa18.09■□□□□ 0.49
CLTCL1-207ENST00000611723 GOLGA6L22H0YM25 854 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms