RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 SYKP43405 635 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 IKQ13123 557 aaPredicted RBP17.78■□□□□ 0.44
RTN1-209ENST00000611068 KARSQ15046 597 aaKnown RBP17.78■□□□□ 0.44
RTN1-209ENST00000611068 TTC38Q5R3I4 469 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 FMNL3Q8IVF7 1028 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 DPF2Q92785 391 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 EPSTI1Q96J88 318 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 CSRNP2Q9H175 543 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 CD2APQ9Y5K6 639 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 CNTNAP1P78357 1384 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 A0A1W2PQ27 194 aa17.77■□□□□ 0.44
RTN1-209ENST00000611068 A0A1W2PQ64 194 aa17.77■□□□□ 0.44
RTN1-209ENST00000611068 A0A1W2PQD8 194 aa17.77■□□□□ 0.44
RTN1-209ENST00000611068 TULP1O00294 542 aaPredicted RBP17.77■□□□□ 0.44
RTN1-209ENST00000611068 LMOD1P29536 600 aaPredicted RBP17.77■□□□□ 0.44
RTN1-209ENST00000611068 CDC25AP30304 524 aa17.77■□□□□ 0.44
RTN1-209ENST00000611068 ACTN3Q08043 901 aaPredicted RBP17.77■□□□□ 0.44
RTN1-209ENST00000611068 ZNF543Q08ER8 600 aa17.77■□□□□ 0.44
RTN1-209ENST00000611068 SPDYE2Q495Y8 402 aa17.77■□□□□ 0.44
RTN1-209ENST00000611068 ZC3H12AQ5D1E8 599 aaKnown RBP17.77■□□□□ 0.44
RTN1-209ENST00000611068 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.77■□□□□ 0.44
RTN1-209ENST00000611068 TOGARAM2Q6ZUX3 1019 aa17.77■□□□□ 0.44
RTN1-209ENST00000611068 TMEM139Q8IV31 216 aa17.77■□□□□ 0.44
RTN1-209ENST00000611068 MICALL2Q8IY33 904 aa17.77■□□□□ 0.44
RTN1-209ENST00000611068 NAT10Q9H0A0 1025 aaKnown RBP17.77■□□□□ 0.44
RTN1-209ENST00000611068 ACBD3Q9H3P7 528 aa17.77■□□□□ 0.44
RTN1-209ENST00000611068 FBXO2Q9UK22 296 aaPredicted RBP17.77■□□□□ 0.44
RTN1-209ENST00000611068 PCDHA6Q9UN73 950 aa17.77■□□□□ 0.44
RTN1-209ENST00000611068 PCDHA4Q9UN74 947 aa17.77■□□□□ 0.44
RTN1-209ENST00000611068 SAMM50Q9Y512 469 aa17.77■□□□□ 0.44
RTN1-209ENST00000611068 PCDHA8Q9Y5H6 950 aa17.77■□□□□ 0.44
RTN1-209ENST00000611068 A0A1W2PRG0 241 aa17.77■□□□□ 0.43
RTN1-209ENST00000611068 CHUKO15111 745 aa17.77■□□□□ 0.43
RTN1-209ENST00000611068 PPP6R2O75170 966 aa17.77■□□□□ 0.43
RTN1-209ENST00000611068 ENTPD3O75355 529 aa17.77■□□□□ 0.43
RTN1-209ENST00000611068 SLC1A4P43007 532 aa17.77■□□□□ 0.43
RTN1-209ENST00000611068 GRIK3Q13003 919 aa17.77■□□□□ 0.43
RTN1-209ENST00000611068 PTGDRQ13258 359 aa17.77■□□□□ 0.43
RTN1-209ENST00000611068 ZKSCAN8Q15776 578 aaPredicted RBP17.77■□□□□ 0.43
RTN1-209ENST00000611068 LONRF3Q496Y0 759 aa17.77■□□□□ 0.43
RTN1-209ENST00000611068 TATDN1Q6P1N9 297 aa17.77■□□□□ 0.43
RTN1-209ENST00000611068 GRAMD1CQ8IYS0 662 aa17.77■□□□□ 0.43
RTN1-209ENST00000611068 ACER1Q8TDN7 264 aa17.77■□□□□ 0.43
RTN1-209ENST00000611068 NOVP48745 357 aa17.76■□□□□ 0.43
RTN1-209ENST00000611068 SLFN13Q68D06 897 aa17.76■□□□□ 0.43
RTN1-209ENST00000611068 AGBL3Q8NEM8 1001 aa17.76■□□□□ 0.43
RTN1-209ENST00000611068 CCDC17Q96LX7 622 aa17.76■□□□□ 0.43
RTN1-209ENST00000611068 KANSL2Q9H9L4 492 aa17.76■□□□□ 0.43
RTN1-209ENST00000611068 JMJD4Q9H9V9 463 aa17.76■□□□□ 0.43
RTN1-209ENST00000611068 SIPA1L1O43166 1804 aa17.76■□□□□ 0.43
RTN1-209ENST00000611068 CCDC194A0A1B0GVG4 234 aa17.76■□□□□ 0.43
RTN1-209ENST00000611068 PPP1R11O60927 126 aaPredicted RBP17.76■□□□□ 0.43
RTN1-209ENST00000611068 ITFG2Q969R8 447 aa17.76■□□□□ 0.43
RTN1-209ENST00000611068 SPZ1Q9BXG8 430 aa17.76■□□□□ 0.43
RTN1-209ENST00000611068 POLR2DO15514 142 aaKnown RBP17.75■□□□□ 0.43
RTN1-209ENST00000611068 MYO1BO43795 1136 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 IRAK1P51617 712 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 FANCCQ00597 558 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 PNOCQ13519 176 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 CRYMQ14894 314 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 FHDC1Q9C0D6 1143 aaPredicted RBP17.75■□□□□ 0.43
RTN1-209ENST00000611068 KCNH3Q9ULD8 1083 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 ZNF541Q9H0D2 1346 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 PLIN4Q96Q06 1357 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 F5H6K3 240 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 SHOX2O60902 331 aaPredicted RBP17.75■□□□□ 0.43
RTN1-209ENST00000611068 KLRC3Q07444 240 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 RASA3Q14644 834 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 RESP18Q5W5W9 173 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 FAM151AQ8WW52 585 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 DESI2Q9BSY9 194 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.75■□□□□ 0.43
RTN1-209ENST00000611068 CNOT7Q9UIV1 285 aaKnown RBP17.75■□□□□ 0.43
RTN1-209ENST00000611068 KIF13BQ9NQT8 1826 aa17.75■□□□□ 0.43
RTN1-209ENST00000611068 NCAPHQ15003 741 aa17.74■□□□□ 0.43
RTN1-209ENST00000611068 UBE2SQ16763 222 aa17.74■□□□□ 0.43
RTN1-209ENST00000611068 KIAA1755Q5JYT7 1200 aa17.74■□□□□ 0.43
RTN1-209ENST00000611068 BCAS4Q8TDM0 211 aa17.74■□□□□ 0.43
RTN1-209ENST00000611068 LZTS2Q9BRK4 669 aa17.74■□□□□ 0.43
RTN1-209ENST00000611068 GLIS2Q9BZE0 524 aaPredicted RBP17.74■□□□□ 0.43
RTN1-209ENST00000611068 ETAA1Q9NY74 926 aa17.74■□□□□ 0.43
RTN1-209ENST00000611068 CAND2O75155 1236 aa17.74■□□□□ 0.43
RTN1-209ENST00000611068 AP1G2O75843 785 aa17.74■□□□□ 0.43
RTN1-209ENST00000611068 PTPREP23469 700 aa17.74■□□□□ 0.43
RTN1-209ENST00000611068 CALML3P27482 149 aa17.74■□□□□ 0.43
RTN1-209ENST00000611068 TNIP1Q15025 636 aa17.74■□□□□ 0.43
RTN1-209ENST00000611068 ASPRV1Q53RT3 343 aa17.74■□□□□ 0.43
RTN1-209ENST00000611068 TMEM179Q6ZVK1 233 aa17.74■□□□□ 0.43
RTN1-209ENST00000611068 THOC1Q96FV9 657 aaKnown RBP17.74■□□□□ 0.43
RTN1-209ENST00000611068 RIOX1Q9H6W3 641 aa17.74■□□□□ 0.43
RTN1-209ENST00000611068 TMEM232C9JQI7 657 aa17.73■□□□□ 0.43
RTN1-209ENST00000611068 MRPL12P52815 198 aaKnown RBP17.73■□□□□ 0.43
RTN1-209ENST00000611068 ADCY2Q08462 1091 aa17.73■□□□□ 0.43
RTN1-209ENST00000611068 DLK2Q6UY11 383 aa17.73■□□□□ 0.43
RTN1-209ENST00000611068 STAMQ92783 540 aa17.73■□□□□ 0.43
RTN1-209ENST00000611068 SNHG28P0DPA3 235 aa17.73■□□□□ 0.43
RTN1-209ENST00000611068 CASP1P29466 404 aa17.73■□□□□ 0.43
RTN1-209ENST00000611068 CLNS1AP54105 237 aaKnown RBP17.73■□□□□ 0.43
RTN1-209ENST00000611068 DGKZQ13574 1117 aa17.73■□□□□ 0.43
RTN1-209ENST00000611068 IL17AQ16552 155 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms