RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 PDCD2LQ9BRP1 358 aa13.32□□□□□ -0.28
LINC00539-204ENST00000608957 ALDH8A1Q9H2A2 487 aaPredicted RBP13.32□□□□□ -0.28
LINC00539-204ENST00000608957 TMEM39AQ9NV64 488 aa13.32□□□□□ -0.28
LINC00539-204ENST00000608957 TANC1Q9C0D5 1861 aa13.31□□□□□ -0.28
LINC00539-204ENST00000608957 hCG_1642624A0A1W2PR95 340 aa13.31□□□□□ -0.28
LINC00539-204ENST00000608957 CCDC69A6NI79 296 aa13.31□□□□□ -0.28
LINC00539-204ENST00000608957 DCDC2CA8MYV0 355 aa13.31□□□□□ -0.28
LINC00539-204ENST00000608957 NKRFO15226 690 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC00539-204ENST00000608957 NR3C2P08235 984 aa13.31□□□□□ -0.28
LINC00539-204ENST00000608957 TXNP10599 105 aaKnown RBP13.31□□□□□ -0.28
LINC00539-204ENST00000608957 ARHGAP1Q07960 439 aa13.31□□□□□ -0.28
LINC00539-204ENST00000608957 ITGA7Q13683 1181 aa13.31□□□□□ -0.28
LINC00539-204ENST00000608957 ANKRD1Q15327 319 aa13.31□□□□□ -0.28
LINC00539-204ENST00000608957 ARHGEF16Q5VV41 709 aa13.31□□□□□ -0.28
LINC00539-204ENST00000608957 DHX32Q7L7V1 743 aaKnown RBP13.31□□□□□ -0.28
LINC00539-204ENST00000608957 TMTC2Q8N394 836 aa13.31□□□□□ -0.28
LINC00539-204ENST00000608957 CTCFLQ8NI51 663 aaPredicted RBP13.31□□□□□ -0.28
LINC00539-204ENST00000608957 IWS1Q96ST2 819 aa13.31□□□□□ -0.28
LINC00539-204ENST00000608957 BRPF3Q9ULD4 1205 aa13.31□□□□□ -0.28
LINC00539-204ENST00000608957 TET1Q8NFU7 2136 aa13.31□□□□□ -0.28
LINC00539-204ENST00000608957 A6NJR5 290 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 ZEB2O60315 1214 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 B4GALT4O60513 344 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 CABYRO75952 493 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 TIMP1P01033 207 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 MYL3P08590 195 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 RAG1P15918 1043 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 SMARCA1P28370 1054 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 TTLL4Q14679 1199 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 PGM5Q15124 567 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 STXBP2Q15833 593 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 APOA5Q6Q788 366 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 TMTC3Q6ZXV5 915 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 GPKOWQ92917 476 aaPredicted RBP eCLIP13.3□□□□□ -0.28
LINC00539-204ENST00000608957 TMX3Q96JJ7 454 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 MPHOSPH6Q99547 160 aaKnown RBP13.3□□□□□ -0.28
LINC00539-204ENST00000608957 MAP3K20Q9NYL2 800 aaKnown RBP13.3□□□□□ -0.28
LINC00539-204ENST00000608957 FRMPD4Q14CM0 1322 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 UMODL1Q5DID0 1318 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 MROH7Q68CQ1 1323 aa13.3□□□□□ -0.28
LINC00539-204ENST00000608957 B4DLN1 442 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 GCOM1H8Y6P7 765 aaPredicted RBP13.29□□□□□ -0.28
LINC00539-204ENST00000608957 HSP90AA1P07900 732 aaKnown RBP13.29□□□□□ -0.28
LINC00539-204ENST00000608957 POLR2MP0CAP2 368 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 MYCLP12524 364 aaPredicted RBP13.29□□□□□ -0.28
LINC00539-204ENST00000608957 KIF5BP33176 963 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 CPT1AP50416 773 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 MRPL12P52815 198 aaKnown RBP13.29□□□□□ -0.28
LINC00539-204ENST00000608957 TOB2Q14106 344 aaPredicted RBP13.29□□□□□ -0.28
LINC00539-204ENST00000608957 Q6ZUG5 572 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 FCHSD1Q86WN1 690 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 MICU3Q86XE3 530 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 SAMD3Q8N6K7 520 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 FANCBQ8NB91 859 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 AFG1LQ8WV93 481 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 RRP36Q96EU6 259 aaKnown RBP13.29□□□□□ -0.28
LINC00539-204ENST00000608957 PPP1R12CQ9BZL4 782 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 TRPV6Q9H1D0 765 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 FAM217BQ9NTX9 383 aaPredicted RBP13.29□□□□□ -0.28
LINC00539-204ENST00000608957 POLR3EQ9NVU0 708 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 DDX41Q9UJV9 622 aaKnown RBP13.29□□□□□ -0.28
LINC00539-204ENST00000608957 LIMCH1Q9UPQ0 1083 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 SLC12A7Q9Y666 1083 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 CNTNAP5Q8WYK1 1306 aa13.29□□□□□ -0.28
LINC00539-204ENST00000608957 MEIS2O14770 477 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 EIF3JO75822 258 aaKnown RBP13.28□□□□□ -0.28
LINC00539-204ENST00000608957 MMP3P08254 477 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 CALM1P0DP23 149 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 CALM2P0DP24 149 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 CALM3P0DP25 149 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 CYP2C18P33260 490 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 GNAQP50148 359 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 MRPS9P82933 396 aaKnown RBP13.28□□□□□ -0.28
LINC00539-204ENST00000608957 FGD1P98174 961 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 SP2Q02086 613 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 FPGSQ05932 587 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 FUT2Q10981 343 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 MFSD5Q6N075 450 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 USP17L6PQ6QN14 398 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 Q7L0L9 218 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 C16orf59Q7L2K0 433 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 VSIG10LQ86VR7 867 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 LZTS2Q9BRK4 669 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 MTG1Q9BT17 334 aaPredicted RBP13.28□□□□□ -0.28
LINC00539-204ENST00000608957 BCAS3Q9H6U6 928 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 SH2B1Q9NRF2 756 aaPredicted RBP13.28□□□□□ -0.28
LINC00539-204ENST00000608957 PTPRSQ13332 1948 aa13.28□□□□□ -0.28
LINC00539-204ENST00000608957 RBAK-RBAKDNI3L0D1 243 aa13.27□□□□□ -0.29
LINC00539-204ENST00000608957 TLR3O15455 904 aaKnown RBP13.27□□□□□ -0.29
LINC00539-204ENST00000608957 SORBS3O60504 671 aa13.27□□□□□ -0.29
LINC00539-204ENST00000608957 GH1P01241 217 aa13.27□□□□□ -0.29
LINC00539-204ENST00000608957 CDC27P30260 824 aa13.27□□□□□ -0.29
LINC00539-204ENST00000608957 SEMA3FQ13275 785 aa13.27□□□□□ -0.29
LINC00539-204ENST00000608957 CUL4AQ13619 759 aa13.27□□□□□ -0.29
LINC00539-204ENST00000608957 NBPF20Q3BBV1 942 aa13.27□□□□□ -0.29
LINC00539-204ENST00000608957 FBXL16Q8N461 479 aa13.27□□□□□ -0.29
LINC00539-204ENST00000608957 SPRYD3Q8NCJ5 442 aa13.27□□□□□ -0.29
LINC00539-204ENST00000608957 KAT2BQ92831 832 aa13.27□□□□□ -0.29
LINC00539-204ENST00000608957 VWCEQ96DN2 955 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms