RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 OR6J1Q8NGC5 347 aa16.52■□□□□ 0.24
PRDM16-210ENST00000607632 EMID1Q96A84 441 aaPredicted RBP16.52■□□□□ 0.24
PRDM16-210ENST00000607632 DDX41Q9UJV9 622 aaKnown RBP16.52■□□□□ 0.24
PRDM16-210ENST00000607632 TRIOBPQ9H2D6 2365 aa16.52■□□□□ 0.23
PRDM16-210ENST00000607632 CCDC196A0A1B0GTZ2 297 aa16.51■□□□□ 0.23
PRDM16-210ENST00000607632 hCG_1642624A0A1W2PR95 340 aa16.51■□□□□ 0.23
PRDM16-210ENST00000607632 KIAA0355O15063 1070 aa16.51■□□□□ 0.23
PRDM16-210ENST00000607632 STAM2O75886 525 aa16.51■□□□□ 0.23
PRDM16-210ENST00000607632 ADD1P35611 737 aaKnown RBP16.51■□□□□ 0.23
PRDM16-210ENST00000607632 METAP2P50579 478 aaKnown RBP eCLIP16.51■□□□□ 0.23
PRDM16-210ENST00000607632 MRPS9P82933 396 aaKnown RBP16.51■□□□□ 0.23
PRDM16-210ENST00000607632 PURAQ00577 322 aaKnown RBP16.51■□□□□ 0.23
PRDM16-210ENST00000607632 ARHGAP1Q07960 439 aa16.51■□□□□ 0.23
PRDM16-210ENST00000607632 NTRK3Q16288 839 aa16.51■□□□□ 0.23
PRDM16-210ENST00000607632 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
PRDM16-210ENST00000607632 TYW1BQ6NUM6 668 aa16.51■□□□□ 0.23
PRDM16-210ENST00000607632 KCNV1Q6PIU1 500 aa16.51■□□□□ 0.23
PRDM16-210ENST00000607632 USP17L6PQ6QN14 398 aa16.51■□□□□ 0.23
PRDM16-210ENST00000607632 CXCL17Q6UXB2 119 aa16.51■□□□□ 0.23
PRDM16-210ENST00000607632 FAM126BQ8IXS8 530 aa16.51■□□□□ 0.23
PRDM16-210ENST00000607632 COPS5Q92905 334 aa16.51■□□□□ 0.23
PRDM16-210ENST00000607632 INPP4AQ96PE3 977 aaPredicted RBP16.51■□□□□ 0.23
PRDM16-210ENST00000607632 POLR3EQ9NVU0 708 aa16.51■□□□□ 0.23
PRDM16-210ENST00000607632 TRIM43BA6NCK2 446 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 EIF5BO60841 1220 aaKnown RBP16.5■□□□□ 0.23
PRDM16-210ENST00000607632 GH1P01241 217 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 CD4P01730 458 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 CLTBP09497 229 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 TGFB3P10600 412 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 CCND2P30279 289 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 ICAM3P32942 547 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 FGD1P98174 961 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 FAAP100Q0VG06 881 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 XRRA1Q6P2D8 792 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 SEPT14Q6ZU15 432 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 SH3RF1Q7Z6J0 888 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 FCHSD1Q86WN1 690 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 TRIM43Q96BQ3 446 aaPredicted RBP16.5■□□□□ 0.23
PRDM16-210ENST00000607632 PSTPIP2Q9H939 334 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 TBX21Q9UL17 535 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 CYP46A1Q9Y6A2 500 aa16.5■□□□□ 0.23
PRDM16-210ENST00000607632 STXBP3O00186 592 aa16.49■□□□□ 0.23
PRDM16-210ENST00000607632 KPNA6O60684 536 aa16.49■□□□□ 0.23
PRDM16-210ENST00000607632 HOXD8P13378 290 aaPredicted RBP16.49■□□□□ 0.23
PRDM16-210ENST00000607632 PDIA3P30101 505 aaKnown RBP16.49■□□□□ 0.23
PRDM16-210ENST00000607632 LY6KQ17RY6 165 aa16.49■□□□□ 0.23
PRDM16-210ENST00000607632 PCNX4Q63HM2 1172 aa16.49■□□□□ 0.23
PRDM16-210ENST00000607632 SMARCC2Q8TAQ2 1214 aa16.49■□□□□ 0.23
PRDM16-210ENST00000607632 GPKOWQ92917 476 aaPredicted RBP eCLIP16.49■□□□□ 0.23
PRDM16-210ENST00000607632 CUL5Q93034 780 aa16.49■□□□□ 0.23
PRDM16-210ENST00000607632 ALDH8A1Q9H2A2 487 aaPredicted RBP16.49■□□□□ 0.23
PRDM16-210ENST00000607632 BARHL2Q9NY43 387 aa16.49■□□□□ 0.23
PRDM16-210ENST00000607632 MRVI1Q9Y6F6 885 aa16.49■□□□□ 0.23
PRDM16-210ENST00000607632 V9GY48 417 aaPredicted RBP16.49■□□□□ 0.23
PRDM16-210ENST00000607632 MYH7BA7E2Y1 1941 aa16.49■□□□□ 0.23
PRDM16-210ENST00000607632 DCDC2CA8MYV0 355 aa16.48■□□□□ 0.23
PRDM16-210ENST00000607632 PQBP1O60828 265 aaKnown RBP16.48■□□□□ 0.23
PRDM16-210ENST00000607632 MMP3P08254 477 aa16.48■□□□□ 0.23
PRDM16-210ENST00000607632 MYCLP12524 364 aaPredicted RBP16.48■□□□□ 0.23
PRDM16-210ENST00000607632 IFNAR1P17181 557 aa16.48■□□□□ 0.23
PRDM16-210ENST00000607632 ITGB8P26012 769 aa16.48■□□□□ 0.23
PRDM16-210ENST00000607632 ITGA7Q13683 1181 aa16.48■□□□□ 0.23
PRDM16-210ENST00000607632 PKN1Q16512 942 aa16.48■□□□□ 0.23
PRDM16-210ENST00000607632 PFKFB3Q16875 520 aaPredicted RBP16.48■□□□□ 0.23
PRDM16-210ENST00000607632 BRDTQ58F21 947 aaPredicted RBP16.48■□□□□ 0.23
PRDM16-210ENST00000607632 HEATR3Q7Z4Q2 680 aa16.48■□□□□ 0.23
PRDM16-210ENST00000607632 ZNF274Q96GC6 653 aaPredicted RBP16.48■□□□□ 0.23
PRDM16-210ENST00000607632 MTG1Q9BT17 334 aaPredicted RBP16.48■□□□□ 0.23
PRDM16-210ENST00000607632 UPF3BQ9BZI7 483 aaKnown RBP16.48■□□□□ 0.23
PRDM16-210ENST00000607632 RIC8AQ9NPQ8 531 aa16.48■□□□□ 0.23
PRDM16-210ENST00000607632 PRKAG2Q9UGJ0 569 aa16.48■□□□□ 0.23
PRDM16-210ENST00000607632 ESYT2A0FGR8 921 aa16.47■□□□□ 0.23
PRDM16-210ENST00000607632 PRPF3O43395 683 aaKnown RBP16.47■□□□□ 0.23
PRDM16-210ENST00000607632 CLK2P49760 499 aaKnown RBP16.47■□□□□ 0.23
PRDM16-210ENST00000607632 FXR1P51114 621 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRDM16-210ENST00000607632 SP2Q02086 613 aa16.47■□□□□ 0.23
PRDM16-210ENST00000607632 SEMA3FQ13275 785 aa16.47■□□□□ 0.23
PRDM16-210ENST00000607632 LAMC2Q13753 1193 aa16.47■□□□□ 0.23
PRDM16-210ENST00000607632 MYSM1Q5VVJ2 828 aa16.47■□□□□ 0.23
PRDM16-210ENST00000607632 AFG1LQ8WV93 481 aa16.47■□□□□ 0.23
PRDM16-210ENST00000607632 RNF26Q9BY78 433 aaPredicted RBP16.47■□□□□ 0.23
PRDM16-210ENST00000607632 SPATA31C2B4DYI2 1134 aa16.46■□□□□ 0.23
PRDM16-210ENST00000607632 SCG2P13521 617 aa16.46■□□□□ 0.23
PRDM16-210ENST00000607632 UBA1P22314 1058 aaKnown RBP16.46■□□□□ 0.23
PRDM16-210ENST00000607632 MDM2Q00987 491 aaPredicted RBP16.46■□□□□ 0.23
PRDM16-210ENST00000607632 UBE2SQ16763 222 aa16.46■□□□□ 0.23
PRDM16-210ENST00000607632 GNPTABQ3T906 1256 aa16.46■□□□□ 0.23
PRDM16-210ENST00000607632 CELF3Q5SZQ8 465 aaKnown RBP16.46■□□□□ 0.23
PRDM16-210ENST00000607632 PPTC7Q8NI37 304 aa16.46■□□□□ 0.23
PRDM16-210ENST00000607632 GLT8D2Q9H1C3 349 aa16.46■□□□□ 0.23
PRDM16-210ENST00000607632 PRDM5Q9NQX1 630 aaPredicted RBP16.46■□□□□ 0.23
PRDM16-210ENST00000607632 LAMA3Q16787 3333 aa16.46■□□□□ 0.23
PRDM16-210ENST00000607632 TLR3O15455 904 aaKnown RBP16.45■□□□□ 0.22
PRDM16-210ENST00000607632 FIBPO43427 364 aa16.45■□□□□ 0.22
PRDM16-210ENST00000607632 SEC24BO95487 1268 aa16.45■□□□□ 0.22
PRDM16-210ENST00000607632 NAPAP54920 295 aa16.45■□□□□ 0.22
PRDM16-210ENST00000607632 PSMC6P62333 389 aa16.45■□□□□ 0.22
PRDM16-210ENST00000607632 PTPN11Q06124 597 aaPredicted RBP16.45■□□□□ 0.22
PRDM16-210ENST00000607632 NFRKBQ6P4R8 1299 aa16.45■□□□□ 0.22
PRDM16-210ENST00000607632 TDHQ8IZJ6 230 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms