RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 HHIPL2Q6UWX4 724 aa8.15□□□□□ -1.1
LINC00458-206ENST00000607494 NOP9Q86U38 636 aaKnown RBP8.15□□□□□ -1.1
LINC00458-206ENST00000607494 ZNF761Q86XN6 746 aaPredicted RBP8.15□□□□□ -1.1
LINC00458-206ENST00000607494 BVESQ8NE79 360 aa8.15□□□□□ -1.1
LINC00458-206ENST00000607494 NTMQ9P121 344 aa8.15□□□□□ -1.1
LINC00458-206ENST00000607494 MRVI1Q9Y6F6 885 aa8.15□□□□□ -1.1
LINC00458-206ENST00000607494 K7ESM1 405 aa8.14□□□□□ -1.11
LINC00458-206ENST00000607494 TBX1O43435 398 aa8.14□□□□□ -1.11
LINC00458-206ENST00000607494 SARSP49591 514 aaKnown RBP8.14□□□□□ -1.11
LINC00458-206ENST00000607494 GJA9P57773 515 aa8.14□□□□□ -1.11
LINC00458-206ENST00000607494 GTF2IRD2BQ6EKJ0 949 aa8.14□□□□□ -1.11
LINC00458-206ENST00000607494 GTF2IRD2Q86UP8 949 aa8.14□□□□□ -1.11
LINC00458-206ENST00000607494 TRBV23OR9-2A0A075B6M9 112 aa8.13□□□□□ -1.11
LINC00458-206ENST00000607494 SGSM2O43147 1006 aa8.13□□□□□ -1.11
LINC00458-206ENST00000607494 ZBTB7AO95365 584 aa8.13□□□□□ -1.11
LINC00458-206ENST00000607494 CYP2C8P10632 490 aa8.13□□□□□ -1.11
LINC00458-206ENST00000607494 VPS37DQ86XT2 251 aa8.13□□□□□ -1.11
LINC00458-206ENST00000607494 TRIM59Q8IWR1 403 aa8.13□□□□□ -1.11
LINC00458-206ENST00000607494 MMP19Q99542 508 aa8.13□□□□□ -1.11
LINC00458-206ENST00000607494 STRIP2Q9ULQ0 834 aa8.13□□□□□ -1.11
LINC00458-206ENST00000607494 NOP56O00567 594 aaKnown RBP8.12□□□□□ -1.11
LINC00458-206ENST00000607494 ATF4P18848 351 aaPredicted RBP8.12□□□□□ -1.11
LINC00458-206ENST00000607494 RBL2Q08999 1139 aa8.12□□□□□ -1.11
LINC00458-206ENST00000607494 DCP2Q8IU60 420 aaKnown RBP8.12□□□□□ -1.11
LINC00458-206ENST00000607494 LINC00482Q8N8I6 264 aa8.12□□□□□ -1.11
LINC00458-206ENST00000607494 ADAMTS17Q8TE56 1095 aa8.12□□□□□ -1.11
LINC00458-206ENST00000607494 FRS2Q8WU20 508 aa8.12□□□□□ -1.11
LINC00458-206ENST00000607494 BTN2A2Q8WVV5 523 aa8.12□□□□□ -1.11
LINC00458-206ENST00000607494 MRGPRX3Q96LB0 322 aa8.12□□□□□ -1.11
LINC00458-206ENST00000607494 TMEFF2Q9UIK5 374 aaPredicted RBP8.12□□□□□ -1.11
LINC00458-206ENST00000607494 B2RBV5 119 aa8.11□□□□□ -1.11
LINC00458-206ENST00000607494 C22orf46C9J442 243 aa8.11□□□□□ -1.11
LINC00458-206ENST00000607494 ARNTLO00327 626 aa8.11□□□□□ -1.11
LINC00458-206ENST00000607494 SMAD7O15105 426 aaKnown RBP8.11□□□□□ -1.11
LINC00458-206ENST00000607494 INSRRP14616 1297 aa8.11□□□□□ -1.11
LINC00458-206ENST00000607494 ETV3LQ6ZN32 361 aa8.11□□□□□ -1.11
LINC00458-206ENST00000607494 NLRP10Q86W26 655 aa8.11□□□□□ -1.11
LINC00458-206ENST00000607494 CCDC103Q8IW40 242 aa8.11□□□□□ -1.11
LINC00458-206ENST00000607494 NPLOC4Q8TAT6 608 aa8.11□□□□□ -1.11
LINC00458-206ENST00000607494 FBXL7Q9UJT9 491 aa8.11□□□□□ -1.11
LINC00458-206ENST00000607494 THBS2P35442 1172 aa8.1□□□□□ -1.11
LINC00458-206ENST00000607494 STAT5AP42229 794 aa8.1□□□□□ -1.11
LINC00458-206ENST00000607494 NCAPHQ15003 741 aa8.1□□□□□ -1.11
LINC00458-206ENST00000607494 CCDC144BQ3MJ40 725 aa8.1□□□□□ -1.11
LINC00458-206ENST00000607494 SOGA3Q5TF21 947 aa8.1□□□□□ -1.11
LINC00458-206ENST00000607494 LARP1BQ659C4 914 aaKnown RBP8.1□□□□□ -1.11
LINC00458-206ENST00000607494 POMZP3Q6PJE2 187 aa8.1□□□□□ -1.11
LINC00458-206ENST00000607494 CD300LDQ6UXZ3 194 aa8.1□□□□□ -1.11
LINC00458-206ENST00000607494 TTLL7Q6ZT98 887 aa8.1□□□□□ -1.11
LINC00458-206ENST00000607494 C11orf84Q9BUA3 381 aaPredicted RBP8.1□□□□□ -1.11
LINC00458-206ENST00000607494 HIRIP3Q9BW71 556 aaPredicted RBP8.1□□□□□ -1.11
LINC00458-206ENST00000607494 NKX2-4Q9H2Z4 354 aa8.1□□□□□ -1.11
LINC00458-206ENST00000607494 SSBP05455 408 aaKnown RBP eCLIP8.09□□□□□ -1.11
LINC00458-206ENST00000607494 NAT2P11245 290 aa8.09□□□□□ -1.11
LINC00458-206ENST00000607494 PUM1Q14671 1186 aaKnown RBP eCLIP8.09□□□□□ -1.11
LINC00458-206ENST00000607494 C6orf15Q6UXA7 325 aaPredicted RBP8.09□□□□□ -1.11
LINC00458-206ENST00000607494 MIB1Q86YT6 1006 aa8.09□□□□□ -1.11
LINC00458-206ENST00000607494 CRACR2BQ8N4Y2 399 aaPredicted RBP8.09□□□□□ -1.11
LINC00458-206ENST00000607494 AP5M1Q9H0R1 490 aa8.09□□□□□ -1.11
LINC00458-206ENST00000607494 PALD1Q9ULE6 856 aa8.09□□□□□ -1.11
LINC00458-206ENST00000607494 NCLP19338 710 aaKnown RBP8.08□□□□□ -1.12
LINC00458-206ENST00000607494 SF1Q15637 639 aaKnown RBP8.08□□□□□ -1.12
LINC00458-206ENST00000607494 ZNF827Q17R98 1081 aa8.08□□□□□ -1.12
LINC00458-206ENST00000607494 PRSS53Q2L4Q9 553 aa8.08□□□□□ -1.12
LINC00458-206ENST00000607494 ZXDCQ2QGD7 858 aaPredicted RBP8.08□□□□□ -1.12
LINC00458-206ENST00000607494 RGL3Q3MIN7 710 aa8.08□□□□□ -1.12
LINC00458-206ENST00000607494 MCF2L2Q86YR7 1114 aa8.08□□□□□ -1.12
LINC00458-206ENST00000607494 CYP26B1Q9NR63 512 aa8.08□□□□□ -1.12
LINC00458-206ENST00000607494 TMA7Q9Y2S6 64 aaKnown RBP8.08□□□□□ -1.12
LINC00458-206ENST00000607494 PPM1GO15355 546 aaPredicted RBP8.07□□□□□ -1.12
LINC00458-206ENST00000607494 ITGB3P05106 788 aa8.07□□□□□ -1.12
LINC00458-206ENST00000607494 FGRP09769 529 aa8.07□□□□□ -1.12
LINC00458-206ENST00000607494 BCL6P41182 706 aa8.07□□□□□ -1.12
LINC00458-206ENST00000607494 ECI1P42126 302 aa8.07□□□□□ -1.12
LINC00458-206ENST00000607494 ITGA1P56199 1179 aa8.07□□□□□ -1.12
LINC00458-206ENST00000607494 SV2CQ496J9 727 aa8.07□□□□□ -1.12
LINC00458-206ENST00000607494 MILR1Q7Z6M3 343 aa8.07□□□□□ -1.12
LINC00458-206ENST00000607494 PMFBP1Q8TBY8 1022 aa8.07□□□□□ -1.12
LINC00458-206ENST00000607494 BORCS6Q96GS4 357 aa8.07□□□□□ -1.12
LINC00458-206ENST00000607494 RBM15Q96T37 977 aaKnown RBP eCLIP8.07□□□□□ -1.12
LINC00458-206ENST00000607494 ACTR10Q9NZ32 417 aa8.07□□□□□ -1.12
LINC00458-206ENST00000607494 LRP2BPQ9P2M1 347 aa8.07□□□□□ -1.12
LINC00458-206ENST00000607494 STK10O94804 968 aaKnown RBP8.06□□□□□ -1.12
LINC00458-206ENST00000607494 ITGAVP06756 1048 aa8.06□□□□□ -1.12
LINC00458-206ENST00000607494 MCTP2Q6DN12 878 aa8.06□□□□□ -1.12
LINC00458-206ENST00000607494 ZNF227Q86WZ6 799 aa8.06□□□□□ -1.12
LINC00458-206ENST00000607494 KYQ8NBH2 561 aa8.06□□□□□ -1.12
LINC00458-206ENST00000607494 SEC14L1Q92503 715 aa8.06□□□□□ -1.12
LINC00458-206ENST00000607494 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.06□□□□□ -1.12
LINC00458-206ENST00000607494 TLDC2A0PJX2 215 aa8.05□□□□□ -1.12
LINC00458-206ENST00000607494 DDAH1O94760 285 aa8.05□□□□□ -1.12
LINC00458-206ENST00000607494 SNRPB2P08579 225 aaKnown RBP8.05□□□□□ -1.12
LINC00458-206ENST00000607494 RPL13P26373 211 aaKnown RBP8.05□□□□□ -1.12
LINC00458-206ENST00000607494 MAGEA10P43363 369 aaPredicted RBP8.05□□□□□ -1.12
LINC00458-206ENST00000607494 ZNF143P52747 638 aaPredicted RBP8.05□□□□□ -1.12
LINC00458-206ENST00000607494 RPL11P62913 178 aaKnown RBP8.05□□□□□ -1.12
LINC00458-206ENST00000607494 CEP68Q76N32 757 aa8.05□□□□□ -1.12
LINC00458-206ENST00000607494 FAM178BQ8IXR5 827 aa8.05□□□□□ -1.12
LINC00458-206ENST00000607494 ZSWIM3Q96MP5 696 aa8.05□□□□□ -1.12
LINC00458-206ENST00000607494 GPR20Q99678 358 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms