RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 PLEKHA8P1O95397 391 aa22.16■■□□□ 1.14
CTSA-217ENST00000607482 CASTP20810 708 aaKnown RBP22.16■■□□□ 1.14
CTSA-217ENST00000607482 SLC35G1Q2M3R5 365 aa22.16■■□□□ 1.14
CTSA-217ENST00000607482 GHRHRQ02643 423 aa22.15■■□□□ 1.14
CTSA-217ENST00000607482 LAMC2Q13753 1193 aa22.15■■□□□ 1.14
CTSA-217ENST00000607482 PGM5Q15124 567 aa22.15■■□□□ 1.14
CTSA-217ENST00000607482 GNPTABQ3T906 1256 aa22.15■■□□□ 1.14
CTSA-217ENST00000607482 CCDC62Q6P9F0 684 aa22.15■■□□□ 1.14
CTSA-217ENST00000607482 SRBD1Q8N5C6 995 aaKnown RBP22.15■■□□□ 1.14
CTSA-217ENST00000607482 SLC43A3Q8NBI5 491 aa22.15■■□□□ 1.14
CTSA-217ENST00000607482 ALDH8A1Q9H2A2 487 aaPredicted RBP22.15■■□□□ 1.14
CTSA-217ENST00000607482 RBM28Q9NW13 759 aaKnown RBP22.15■■□□□ 1.14
CTSA-217ENST00000607482 BAZ2BQ9UIF8 2168 aaKnown RBP22.15■■□□□ 1.14
CTSA-217ENST00000607482 ZBTB43O43298 467 aa22.14■■□□□ 1.13
CTSA-217ENST00000607482 B4GALT4O60513 344 aa22.14■■□□□ 1.13
CTSA-217ENST00000607482 CD4P01730 458 aa22.14■■□□□ 1.13
CTSA-217ENST00000607482 CYP2C18P33260 490 aa22.14■■□□□ 1.13
CTSA-217ENST00000607482 DGKDQ16760 1214 aa22.14■■□□□ 1.13
CTSA-217ENST00000607482 NBPF20Q3BBV1 942 aa22.14■■□□□ 1.13
CTSA-217ENST00000607482 HEATR3Q7Z4Q2 680 aa22.14■■□□□ 1.13
CTSA-217ENST00000607482 VSIG10LQ86VR7 867 aa22.14■■□□□ 1.13
CTSA-217ENST00000607482 SGMS1Q86VZ5 419 aa22.14■■□□□ 1.13
CTSA-217ENST00000607482 TCEANC2Q96MN5 208 aa22.14■■□□□ 1.13
CTSA-217ENST00000607482 DDX41Q9UJV9 622 aaKnown RBP22.14■■□□□ 1.13
CTSA-217ENST00000607482 LTBP2Q14767 1821 aa22.14■■□□□ 1.13
CTSA-217ENST00000607482 SZT2Q5T011 3432 aa22.13■■□□□ 1.13
CTSA-217ENST00000607482 GRIN2DO15399 1336 aa22.13■■□□□ 1.13
CTSA-217ENST00000607482 CENPBP07199 599 aaPredicted RBP22.13■■□□□ 1.13
CTSA-217ENST00000607482 CSF2RAP15509 400 aa22.13■■□□□ 1.13
CTSA-217ENST00000607482 RTN1Q16799 776 aa22.13■■□□□ 1.13
CTSA-217ENST00000607482 RASEFQ8IZ41 740 aa22.13■■□□□ 1.13
CTSA-217ENST00000607482 JAKMIP1Q96N16 626 aaKnown RBP22.13■■□□□ 1.13
CTSA-217ENST00000607482 PSTPIP2Q9H939 334 aa22.13■■□□□ 1.13
CTSA-217ENST00000607482 MLXIPQ9HAP2 919 aa22.13■■□□□ 1.13
CTSA-217ENST00000607482 TRMT13Q9NUP7 481 aaKnown RBP22.13■■□□□ 1.13
CTSA-217ENST00000607482 hCG_1642624A0A1W2PR95 340 aa22.12■■□□□ 1.13
CTSA-217ENST00000607482 SORBS3O60504 671 aa22.12■■□□□ 1.13
CTSA-217ENST00000607482 MMP3P08254 477 aa22.12■■□□□ 1.13
CTSA-217ENST00000607482 ARHGAP1Q07960 439 aa22.12■■□□□ 1.13
CTSA-217ENST00000607482 TSGA10IPQ3SY00 556 aa22.12■■□□□ 1.13
CTSA-217ENST00000607482 ZNF697Q5TEC3 545 aa22.12■■□□□ 1.13
CTSA-217ENST00000607482 NFRKBQ6P4R8 1299 aa22.12■■□□□ 1.13
CTSA-217ENST00000607482 TMTC3Q6ZXV5 915 aa22.12■■□□□ 1.13
CTSA-217ENST00000607482 Q7L0L9 218 aa22.12■■□□□ 1.13
CTSA-217ENST00000607482 MTIF3Q9H2K0 278 aaKnown RBP22.12■■□□□ 1.13
CTSA-217ENST00000607482 KLF18A0A0U1RQI7 1052 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 GOLGA8AA7E2F4 631 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 GOLGA8BA8MQT2 603 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 STAM2O75886 525 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 TGFB3P10600 412 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 EPHB4P54760 987 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 CCL23P55773 120 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 ADCK5Q3MIX3 580 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 PSRC1Q6PGN9 363 aaPredicted RBP22.11■■□□□ 1.13
CTSA-217ENST00000607482 APOA5Q6Q788 366 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 USP17L6PQ6QN14 398 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 BLOC1S2Q6QNY1 142 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 C7orf31Q8N865 590 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 RETREG2Q8NC44 543 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 ZFP91Q96JP5 570 aaPredicted RBP22.11■■□□□ 1.13
CTSA-217ENST00000607482 SPATA33Q96N06 139 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 KATNAL1Q9BW62 490 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 PPP4R2Q9NY27 417 aa22.11■■□□□ 1.13
CTSA-217ENST00000607482 SPDYE3A6NKU9 549 aa22.1■■□□□ 1.13
CTSA-217ENST00000607482 NOP56O00567 594 aaKnown RBP22.1■■□□□ 1.13
CTSA-217ENST00000607482 ACRP10323 421 aa22.1■■□□□ 1.13
CTSA-217ENST00000607482 PSMA5P28066 241 aa22.1■■□□□ 1.13
CTSA-217ENST00000607482 EXOSC10Q01780 885 aaKnown RBP22.1■■□□□ 1.13
CTSA-217ENST00000607482 PTPN11Q06124 597 aaPredicted RBP22.1■■□□□ 1.13
CTSA-217ENST00000607482 COL9A3Q14050 684 aaPredicted RBP22.1■■□□□ 1.13
CTSA-217ENST00000607482 RPUSD2Q8IZ73 545 aaKnown RBP22.1■■□□□ 1.13
CTSA-217ENST00000607482 IL31RAQ8NI17 732 aa22.1■■□□□ 1.13
CTSA-217ENST00000607482 PPTC7Q8NI37 304 aa22.1■■□□□ 1.13
CTSA-217ENST00000607482 RTEL1Q9NZ71 1219 aa22.1■■□□□ 1.13
CTSA-217ENST00000607482 GGPS1O95749 300 aa22.09■■□□□ 1.13
CTSA-217ENST00000607482 CYP2C9P11712 490 aa22.09■■□□□ 1.13
CTSA-217ENST00000607482 CELF3Q5SZQ8 465 aaKnown RBP22.09■■□□□ 1.13
CTSA-217ENST00000607482 PPP1R13LQ8WUF5 828 aa22.09■■□□□ 1.13
CTSA-217ENST00000607482 EMID1Q96A84 441 aaPredicted RBP22.09■■□□□ 1.13
CTSA-217ENST00000607482 FAM161BQ96MY7 647 aa22.09■■□□□ 1.13
CTSA-217ENST00000607482 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.09■■□□□ 1.132e-17■□□□□ 11.1
CTSA-217ENST00000607482 NOC4LQ9BVI4 516 aaKnown RBP22.09■■□□□ 1.13
CTSA-217ENST00000607482 EHMT1Q9H9B1 1298 aa22.09■■□□□ 1.13
CTSA-217ENST00000607482 IL23AQ9NPF7 189 aa22.09■■□□□ 1.13
CTSA-217ENST00000607482 CCDC196A0A1B0GTZ2 297 aa22.08■■□□□ 1.13
CTSA-217ENST00000607482 PIK3CDO00329 1044 aa22.08■■□□□ 1.13
CTSA-217ENST00000607482 FGBP02675 491 aa22.08■■□□□ 1.13
CTSA-217ENST00000607482 SMAD3P84022 425 aaKnown RBP22.08■■□□□ 1.13
CTSA-217ENST00000607482 BFSP2Q13515 415 aa22.08■■□□□ 1.13
CTSA-217ENST00000607482 PTGISQ16647 500 aa22.08■■□□□ 1.13
CTSA-217ENST00000607482 NLRX1Q86UT6 975 aa22.08■■□□□ 1.13
CTSA-217ENST00000607482 CCDC155Q8N6L0 562 aa22.08■■□□□ 1.13
CTSA-217ENST00000607482 ALG1Q9BT22 464 aa22.08■■□□□ 1.13
CTSA-217ENST00000607482 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.07■■□□□ 1.12
CTSA-217ENST00000607482 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.07■■□□□ 1.12
CTSA-217ENST00000607482 PPFIA4O75335 1185 aa22.07■■□□□ 1.12
CTSA-217ENST00000607482 HSPA4P34932 840 aa22.07■■□□□ 1.12
CTSA-217ENST00000607482 NAPAP54920 295 aa22.07■■□□□ 1.12
CTSA-217ENST00000607482 NEDD9Q14511 834 aa22.07■■□□□ 1.12
CTSA-217ENST00000607482 MYSM1Q5VVJ2 828 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms