RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 KCNH6Q9H252 994 aa17.61■□□□□ 0.41
SSBP4-214ENST00000607020 INSL6Q9Y581 213 aa17.61■□□□□ 0.41
SSBP4-214ENST00000607020 FRMPD2Q68DX3 1309 aaPredicted RBP17.61■□□□□ 0.41
SSBP4-214ENST00000607020 KCNA5P22460 613 aa17.6■□□□□ 0.41
SSBP4-214ENST00000607020 MKRN4PQ13434 485 aaPredicted RBP17.6■□□□□ 0.41
SSBP4-214ENST00000607020 DGKDQ16760 1214 aa17.6■□□□□ 0.41
SSBP4-214ENST00000607020 EMID1Q96A84 441 aaPredicted RBP17.6■□□□□ 0.41
SSBP4-214ENST00000607020 IWS1Q96ST2 819 aa17.6■□□□□ 0.41
SSBP4-214ENST00000607020 CTNNA3Q9UI47 895 aa17.6■□□□□ 0.41
SSBP4-214ENST00000607020 BRWD1Q9NSI6 2320 aa17.6■□□□□ 0.41
SSBP4-214ENST00000607020 POTEB3A0JP26 581 aa17.59■□□□□ 0.41
SSBP4-214ENST00000607020 HAS3O00219 553 aa17.59■□□□□ 0.41
SSBP4-214ENST00000607020 HTRA4P83105 476 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-214ENST00000607020 LY6KQ17RY6 165 aa17.59■□□□□ 0.41
SSBP4-214ENST00000607020 PTCRAQ6ISU1 281 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-214ENST00000607020 POTEBQ6S5H4 581 aa17.59■□□□□ 0.41
SSBP4-214ENST00000607020 C7orf31Q8N865 590 aa17.59■□□□□ 0.41
SSBP4-214ENST00000607020 SP7Q8TDD2 431 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-214ENST00000607020 NSUN6Q8TEA1 469 aaKnown RBP17.59■□□□□ 0.41
SSBP4-214ENST00000607020 MRPL38Q96DV4 380 aaKnown RBP17.59■□□□□ 0.41
SSBP4-214ENST00000607020 HDAC6Q9UBN7 1215 aa17.59■□□□□ 0.41
SSBP4-214ENST00000607020 MTUS1Q9ULD2 1270 aa17.59■□□□□ 0.41
SSBP4-214ENST00000607020 IL9P15248 144 aa17.58■□□□□ 0.4
SSBP4-214ENST00000607020 CHMP4BP1P59074 171 aa17.58■□□□□ 0.4
SSBP4-214ENST00000607020 MBTPS1Q14703 1052 aa17.58■□□□□ 0.4
SSBP4-214ENST00000607020 COL19A1Q14993 1142 aa17.58■□□□□ 0.4
SSBP4-214ENST00000607020 STXBP2Q15833 593 aa17.58■□□□□ 0.4
SSBP4-214ENST00000607020 GPATCH4Q5T3I0 446 aaKnown RBP17.58■□□□□ 0.4
SSBP4-214ENST00000607020 C20orf194Q5TEA3 1177 aa17.58■□□□□ 0.4
SSBP4-214ENST00000607020 VPS53Q5VIR6 699 aa17.58■□□□□ 0.4
SSBP4-214ENST00000607020 FBXO22Q8NEZ5 403 aa17.58■□□□□ 0.4
SSBP4-214ENST00000607020 SAMD11Q96NU1 681 aa17.58■□□□□ 0.4
SSBP4-214ENST00000607020 KATNAL1Q9BW62 490 aa17.58■□□□□ 0.4
SSBP4-214ENST00000607020 DDX41Q9UJV9 622 aaKnown RBP17.58■□□□□ 0.4
SSBP4-214ENST00000607020 RCAN3Q9UKA8 241 aa17.58■□□□□ 0.4
SSBP4-214ENST00000607020 TET1Q8NFU7 2136 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 SCN5AQ14524 2016 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 LCTP09848 1927 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 LGR5O75473 907 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 F2P00734 622 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 FGAP02671 866 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 HOXD8P13378 290 aaPredicted RBP17.57■□□□□ 0.4
SSBP4-214ENST00000607020 SSTR3P32745 418 aaPredicted RBP17.57■□□□□ 0.4
SSBP4-214ENST00000607020 PSEN2P49810 448 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 LAMC2Q13753 1193 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 PTPROQ16827 1216 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 ZNF618Q5T7W0 954 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 SEPT14Q6ZU15 432 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 TICAM2Q86XR7 235 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 SYTL5Q8TDW5 730 aaPredicted RBP17.57■□□□□ 0.4
SSBP4-214ENST00000607020 TAAR1Q96RJ0 339 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 CRBNQ96SW2 442 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 HELLSQ9NRZ9 838 aa17.57■□□□□ 0.4
SSBP4-214ENST00000607020 EMSYQ7Z589 1322 aa17.56■□□□□ 0.4
SSBP4-214ENST00000607020 PCP11498 1178 aaKnown RBP17.56■□□□□ 0.4
SSBP4-214ENST00000607020 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.56■□□□□ 0.4
SSBP4-214ENST00000607020 MCF2L2Q86YR7 1114 aa17.56■□□□□ 0.4
SSBP4-214ENST00000607020 PPTC7Q8NI37 304 aa17.56■□□□□ 0.4
SSBP4-214ENST00000607020 TBC1D5Q92609 795 aa17.56■□□□□ 0.4
SSBP4-214ENST00000607020 C17orf80Q9BSJ5 609 aa17.56■□□□□ 0.4
SSBP4-214ENST00000607020 TOMM22Q9NS69 142 aa17.56■□□□□ 0.4
SSBP4-214ENST00000607020 PRKAG3Q9UGI9 489 aa17.56■□□□□ 0.4
SSBP4-214ENST00000607020 ABCB11O95342 1321 aa17.55■□□□□ 0.4
SSBP4-214ENST00000607020 DCXO43602 365 aa17.55■□□□□ 0.4
SSBP4-214ENST00000607020 PPFIA4O75335 1185 aa17.55■□□□□ 0.4
SSBP4-214ENST00000607020 EIF3JO75822 258 aaKnown RBP17.55■□□□□ 0.4
SSBP4-214ENST00000607020 AMHP03971 560 aa17.55■□□□□ 0.4
SSBP4-214ENST00000607020 MRE11P49959 708 aa17.55■□□□□ 0.4
SSBP4-214ENST00000607020 MFSD10Q14728 455 aa17.55■□□□□ 0.4
SSBP4-214ENST00000607020 KIAA0753Q2KHM9 967 aa17.55■□□□□ 0.4
SSBP4-214ENST00000607020 TIGD5Q53EQ6 642 aa17.55■□□□□ 0.4
SSBP4-214ENST00000607020 RRP12Q5JTH9 1297 aaKnown RBP17.55■□□□□ 0.4
SSBP4-214ENST00000607020 OTUD7AQ8TE49 926 aaPredicted RBP17.55■□□□□ 0.4
SSBP4-214ENST00000607020 WNT8BQ93098 351 aa17.55■□□□□ 0.4
SSBP4-214ENST00000607020 PABPC5Q96DU9 382 aaKnown RBP17.55■□□□□ 0.4
SSBP4-214ENST00000607020 RMDN3Q96TC7 470 aa17.55■□□□□ 0.4
SSBP4-214ENST00000607020 COL20A1Q9P218 1284 aa17.55■□□□□ 0.4
SSBP4-214ENST00000607020 ZMYM6O95789 1325 aa17.54■□□□□ 0.4
SSBP4-214ENST00000607020 C19orf67A6NJJ6 358 aa17.54■□□□□ 0.4
SSBP4-214ENST00000607020 H3BNC9 293 aa17.54■□□□□ 0.4
SSBP4-214ENST00000607020 MX1P20591 662 aa17.54■□□□□ 0.4
SSBP4-214ENST00000607020 CSPP1Q1MSJ5 1256 aa17.54■□□□□ 0.4
SSBP4-214ENST00000607020 USH1GQ495M9 461 aa17.54■□□□□ 0.4
SSBP4-214ENST00000607020 EPC2Q52LR7 807 aa17.54■□□□□ 0.4
SSBP4-214ENST00000607020 FAM117BQ6P1L5 589 aa17.54■□□□□ 0.4
SSBP4-214ENST00000607020 CHST3Q7LGC8 479 aa17.54■□□□□ 0.4
SSBP4-214ENST00000607020 DGKHQ86XP1 1220 aa17.54■□□□□ 0.4
SSBP4-214ENST00000607020 DBF4BQ8NFT6 615 aa17.54■□□□□ 0.4
SSBP4-214ENST00000607020 EVI5LQ96CN4 794 aa17.54■□□□□ 0.4
SSBP4-214ENST00000607020 ALG1Q9BT22 464 aa17.54■□□□□ 0.4
SSBP4-214ENST00000607020 FAM50BQ9Y247 325 aa17.54■□□□□ 0.4
SSBP4-214ENST00000607020 SALL3Q9BXA9 1300 aa17.53■□□□□ 0.4
SSBP4-214ENST00000607020 TANC1Q9C0D5 1861 aa17.53■□□□□ 0.4
SSBP4-214ENST00000607020 NT5C2P49902 561 aa17.53■□□□□ 0.4
SSBP4-214ENST00000607020 NHLH1Q02575 133 aa17.53■□□□□ 0.4
SSBP4-214ENST00000607020 ZP2Q05996 745 aa17.53■□□□□ 0.4
SSBP4-214ENST00000607020 PLEKHG4Q58EX7 1191 aa17.53■□□□□ 0.4
SSBP4-214ENST00000607020 SERINC5Q86VE9 423 aa17.53■□□□□ 0.4
SSBP4-214ENST00000607020 BANK1Q8NDB2 785 aa17.53■□□□□ 0.4
SSBP4-214ENST00000607020 RSPH10B2B2RC85 870 aa17.52■□□□□ 0.4
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