RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 TMEM67Q5HYA8 995 aa15.47■□□□□ 0.07
CTSA-213ENST00000606782 SEPT14Q6ZU15 432 aa15.47■□□□□ 0.07
CTSA-213ENST00000606782 VSIG10LQ86VR7 867 aa15.47■□□□□ 0.07
CTSA-213ENST00000606782 RPUSD2Q8IZ73 545 aaKnown RBP15.47■□□□□ 0.07
CTSA-213ENST00000606782 PIGSQ96S52 555 aa15.47■□□□□ 0.07
CTSA-213ENST00000606782 PDCD2LQ9BRP1 358 aa15.47■□□□□ 0.07
CTSA-213ENST00000606782 TRMT13Q9NUP7 481 aaKnown RBP15.47■□□□□ 0.07
CTSA-213ENST00000606782 A0A0C4DFX4 3053 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 SLC27A2O14975 620 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 RGS20O76081 388 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 FGBP02675 491 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 MMP3P08254 477 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 HOXD8P13378 290 aaPredicted RBP15.46■□□□□ 0.07
CTSA-213ENST00000606782 EIF2AK2P19525 551 aaKnown RBP15.46■□□□□ 0.07
CTSA-213ENST00000606782 HSPA4P34932 840 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 LY6KQ17RY6 165 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 CREB3L3Q68CJ9 461 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 CHST3Q7LGC8 479 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 CATIPQ7Z7H3 387 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 SESTD1Q86VW0 696 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 AFG1LQ8WV93 481 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 BACH2Q9BYV9 841 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 LY9Q9HBG7 655 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 MYO9BQ13459 2157 aa15.46■□□□□ 0.07
CTSA-213ENST00000606782 PITPNM1O00562 1244 aa15.45■□□□□ 0.06
CTSA-213ENST00000606782 DDAH1O94760 285 aa15.45■□□□□ 0.06
CTSA-213ENST00000606782 PFKMP08237 780 aa15.45■□□□□ 0.06
CTSA-213ENST00000606782 CYP2C9P11712 490 aa15.45■□□□□ 0.06
CTSA-213ENST00000606782 CCL23P55773 120 aa15.45■□□□□ 0.06
CTSA-213ENST00000606782 KCNV1Q6PIU1 500 aa15.45■□□□□ 0.06
CTSA-213ENST00000606782 TMTC2Q8N394 836 aa15.45■□□□□ 0.06
CTSA-213ENST00000606782 KAT2BQ92831 832 aa15.45■□□□□ 0.06
CTSA-213ENST00000606782 TIFAQ96CG3 184 aa15.45■□□□□ 0.06
CTSA-213ENST00000606782 SPZ1Q9BXG8 430 aa15.45■□□□□ 0.06
CTSA-213ENST00000606782 MTIF3Q9H2K0 278 aaKnown RBP15.45■□□□□ 0.06
CTSA-213ENST00000606782 CXXC1Q9P0U4 656 aaPredicted RBP15.45■□□□□ 0.06
CTSA-213ENST00000606782 GCOM1H8Y6P7 765 aaPredicted RBP15.44■□□□□ 0.06
CTSA-213ENST00000606782 POLR2MP0CAP2 368 aa15.44■□□□□ 0.06
CTSA-213ENST00000606782 TGFB3P10600 412 aa15.44■□□□□ 0.06
CTSA-213ENST00000606782 CASTP20810 708 aaKnown RBP15.44■□□□□ 0.06
CTSA-213ENST00000606782 RFC2P35250 354 aa15.44■□□□□ 0.06
CTSA-213ENST00000606782 LAMC2Q13753 1193 aa15.44■□□□□ 0.06
CTSA-213ENST00000606782 PGM5Q15124 567 aa15.44■□□□□ 0.06
CTSA-213ENST00000606782 DGKDQ16760 1214 aa15.44■□□□□ 0.06
CTSA-213ENST00000606782 HOMER1Q86YM7 354 aa15.44■□□□□ 0.06
CTSA-213ENST00000606782 PPTC7Q8NI37 304 aa15.44■□□□□ 0.06
CTSA-213ENST00000606782 TMEM87BQ96K49 555 aa15.44■□□□□ 0.06
CTSA-213ENST00000606782 CTAGE1Q96RT6 745 aa15.44■□□□□ 0.06
CTSA-213ENST00000606782 PBX4Q9BYU1 374 aa15.44■□□□□ 0.06
CTSA-213ENST00000606782 ZNF576Q9H609 170 aa15.44■□□□□ 0.06
CTSA-213ENST00000606782 FRMPD4Q14CM0 1322 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 GRXCR1A8MXD5 290 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 PRC1O43663 620 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 HOXA13P31271 388 aaPredicted RBP15.43■□□□□ 0.06
CTSA-213ENST00000606782 KIF5BP33176 963 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 MCM5P33992 734 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 LIFRP42702 1097 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 GRIN2CQ14957 1233 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 FAM47CQ5HY64 1035 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 RNF20Q5VTR2 975 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 MYSM1Q5VVJ2 828 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 RASEFQ8IZ41 740 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 ZNF654Q8IZM8 581 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 MYLIPQ8WY64 445 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 SCLYQ96I15 445 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 LZTS2Q9BRK4 669 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 MRVI1Q9Y6F6 885 aa15.43■□□□□ 0.06
CTSA-213ENST00000606782 HAS3O00219 553 aa15.42■□□□□ 0.06
CTSA-213ENST00000606782 SH2B2O14492 632 aaPredicted RBP15.42■□□□□ 0.06
CTSA-213ENST00000606782 PPFIA4O75335 1185 aa15.42■□□□□ 0.06
CTSA-213ENST00000606782 PBX2P40425 430 aa15.42■□□□□ 0.06
CTSA-213ENST00000606782 GNAQP50148 359 aa15.42■□□□□ 0.06
CTSA-213ENST00000606782 RBL2Q08999 1139 aa15.42■□□□□ 0.06
CTSA-213ENST00000606782 COL9A3Q14050 684 aaPredicted RBP15.42■□□□□ 0.06
CTSA-213ENST00000606782 RAB30Q15771 203 aa15.42■□□□□ 0.06
CTSA-213ENST00000606782 OTOP2Q7RTS6 562 aa15.42■□□□□ 0.06
CTSA-213ENST00000606782 IL31RAQ8NI17 732 aa15.42■□□□□ 0.06
CTSA-213ENST00000606782 CTCFLQ8NI51 663 aaPredicted RBP15.42■□□□□ 0.06
CTSA-213ENST00000606782 PIK3CDO00329 1044 aa15.41■□□□□ 0.06
CTSA-213ENST00000606782 STAM2O75886 525 aa15.41■□□□□ 0.06
CTSA-213ENST00000606782 F2P00734 622 aa15.41■□□□□ 0.06
CTSA-213ENST00000606782 IQCF3P0C7M6 154 aa15.41■□□□□ 0.06
CTSA-213ENST00000606782 MYCLP12524 364 aaPredicted RBP15.41■□□□□ 0.06
CTSA-213ENST00000606782 CCND2P30279 289 aa15.41■□□□□ 0.06
CTSA-213ENST00000606782 ICAM3P32942 547 aa15.41■□□□□ 0.06
CTSA-213ENST00000606782 SP2Q02086 613 aa15.41■□□□□ 0.06
CTSA-213ENST00000606782 BFSP2Q13515 415 aa15.41■□□□□ 0.06
CTSA-213ENST00000606782 CELF3Q5SZQ8 465 aaKnown RBP15.41■□□□□ 0.06
CTSA-213ENST00000606782 DHX37Q8IY37 1157 aaKnown RBP15.41■□□□□ 0.06
CTSA-213ENST00000606782 MAFAQ8NHW3 353 aaPredicted RBP15.41■□□□□ 0.06
CTSA-213ENST00000606782 CAGE1Q8TC20 777 aa15.41■□□□□ 0.06
CTSA-213ENST00000606782 SNX14Q9Y5W7 946 aa15.41■□□□□ 0.06
CTSA-213ENST00000606782 MYH7BA7E2Y1 1941 aa15.41■□□□□ 0.06
CTSA-213ENST00000606782 CDH23Q9H251 3354 aa15.41■□□□□ 0.06
CTSA-213ENST00000606782 DLL1O00548 723 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 FOSL2P15408 326 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 KRT32Q14532 448 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 PTGISQ16647 500 aa15.4■□□□□ 0.06
CTSA-213ENST00000606782 GDF6Q6KF10 455 aaPredicted RBP15.4■□□□□ 0.06
CTSA-213ENST00000606782 SGMS1Q86VZ5 419 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms