RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PLIN2Q99541 437 aa24.3■■□□□ 1.48
USP6NL-204ENST00000606752 RIPK3Q9Y572 518 aa24.3■■□□□ 1.48
USP6NL-204ENST00000606752 RLFQ13129 1914 aa24.29■■□□□ 1.48
USP6NL-204ENST00000606752 IGLV3-22A0A075B6J6 115 aa24.29■■□□□ 1.48
USP6NL-204ENST00000606752 BECN2A8MW95 431 aa24.29■■□□□ 1.48
USP6NL-204ENST00000606752 HOXA7P31268 230 aaPredicted RBP24.29■■□□□ 1.48
USP6NL-204ENST00000606752 MORC3Q14149 939 aa24.29■■□□□ 1.48
USP6NL-204ENST00000606752 SNRNP48Q6IEG0 339 aaKnown RBP24.29■■□□□ 1.48
USP6NL-204ENST00000606752 CYP2W1Q8TAV3 490 aa24.29■■□□□ 1.48
USP6NL-204ENST00000606752 SYTL5Q8TDW5 730 aaPredicted RBP24.29■■□□□ 1.48
USP6NL-204ENST00000606752 RRAGCQ9HB90 399 aa24.29■■□□□ 1.48
USP6NL-204ENST00000606752 RNF146Q9NTX7 359 aa24.29■■□□□ 1.48
USP6NL-204ENST00000606752 COL20A1Q9P218 1284 aa24.29■■□□□ 1.48
USP6NL-204ENST00000606752 PARP14Q460N5 1801 aa24.29■■□□□ 1.48
USP6NL-204ENST00000606752 GOLGA6L19H0YKK7 550 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 BMP6P22004 513 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 GADL1Q6ZQY3 521 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 DHX40Q8IX18 779 aaKnown RBP24.28■■□□□ 1.48
USP6NL-204ENST00000606752 PDLIM2Q96JY6 352 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 TEX13BQ9BXU2 312 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 KBTBD4Q9NVX7 518 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 RPTORQ8N122 1335 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 UNCXA6NJT0 531 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 MSH4O15457 936 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 MYL1P05976 194 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 CASP1P29466 404 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 RPS6P62753 249 aaKnown RBP24.28■■□□□ 1.48
USP6NL-204ENST00000606752 TKFCQ3LXA3 575 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 CEP55Q53EZ4 464 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 MLKLQ8NB16 471 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 SNX29Q8TEQ0 813 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 OPTNQ96CV9 577 aa24.28■■□□□ 1.48
USP6NL-204ENST00000606752 TRAF5O00463 557 aa24.27■■□□□ 1.48
USP6NL-204ENST00000606752 UBXN2AP68543 259 aa24.27■■□□□ 1.48
USP6NL-204ENST00000606752 GRB10Q13322 594 aa24.27■■□□□ 1.48
USP6NL-204ENST00000606752 RNF207Q6ZRF8 634 aa24.27■■□□□ 1.48
USP6NL-204ENST00000606752 CDK5RAP3Q96JB5 506 aa24.27■■□□□ 1.48
USP6NL-204ENST00000606752 UIMC1Q96RL1 719 aa24.27■■□□□ 1.48
USP6NL-204ENST00000606752 SLC26A4O43511 780 aa24.26■■□□□ 1.47
USP6NL-204ENST00000606752 STAT3P40763 770 aa24.26■■□□□ 1.47
USP6NL-204ENST00000606752 CUL4BQ13620 913 aa24.26■■□□□ 1.47
USP6NL-204ENST00000606752 LRRC15Q8TF66 581 aa24.26■■□□□ 1.47
USP6NL-204ENST00000606752 PNMA5Q96PV4 448 aa24.26■■□□□ 1.47
USP6NL-204ENST00000606752 BLZF1Q9H2G9 400 aa24.26■■□□□ 1.47
USP6NL-204ENST00000606752 STK17AQ9UEE5 414 aa24.26■■□□□ 1.47
USP6NL-204ENST00000606752 MEIS1O00470 390 aa24.26■■□□□ 1.47
USP6NL-204ENST00000606752 NSMFQ6X4W1 530 aa24.26■■□□□ 1.47
USP6NL-204ENST00000606752 PLA2G4DQ86XP0 818 aa24.26■■□□□ 1.47
USP6NL-204ENST00000606752 AOPEPQ8N6M6 819 aa24.26■■□□□ 1.47
USP6NL-204ENST00000606752 NUDT12Q9BQG2 462 aa24.26■■□□□ 1.47
USP6NL-204ENST00000606752 MAF1Q9H063 256 aa24.26■■□□□ 1.47
USP6NL-204ENST00000606752 DACH1Q9UI36 760 aa24.26■■□□□ 1.47
USP6NL-204ENST00000606752 PLCB2Q00722 1185 aa24.25■■□□□ 1.47
USP6NL-204ENST00000606752 SPIRE1Q08AE8 756 aa24.25■■□□□ 1.47
USP6NL-204ENST00000606752 LBX2Q6XYB7 198 aa24.25■■□□□ 1.47
USP6NL-204ENST00000606752 MB21D1Q8N884 522 aa24.25■■□□□ 1.47
USP6NL-204ENST00000606752 SLC10A4Q96EP9 437 aa24.25■■□□□ 1.47
USP6NL-204ENST00000606752 ZNF408Q9H9D4 720 aa24.25■■□□□ 1.47
USP6NL-204ENST00000606752 SMTNL1A8MU46 457 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 ADCY5O95622 1261 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 HYIQ5T013 277 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 SLC30A10Q6XR72 485 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 FASTKD5Q7L8L6 764 aaKnown RBP24.24■■□□□ 1.47
USP6NL-204ENST00000606752 TAAR1Q96RJ0 339 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 MXRA8Q9BRK3 442 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 AGTPBP1Q9UPW5 1226 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 STK24Q9Y6E0 443 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 PTPRFP10586 1907 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 AP5Z1O43299 807 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 SETQ01105 290 aaPredicted RBP24.24■■□□□ 1.47
USP6NL-204ENST00000606752 AMPD3Q01432 767 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 FMR1Q06787 632 aaKnown RBP eCLIP24.24■■□□□ 1.47
USP6NL-204ENST00000606752 BAATQ14032 418 aaPredicted RBP24.24■■□□□ 1.47
USP6NL-204ENST00000606752 PLS1Q14651 629 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 TMEM119Q4V9L6 283 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 PCNX4Q63HM2 1172 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 NT5C3AQ9H0P0 336 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 FRMPD4Q14CM0 1322 aa24.24■■□□□ 1.47
USP6NL-204ENST00000606752 IKBKBO14920 756 aa24.23■■□□□ 1.47
USP6NL-204ENST00000606752 CCT6AP40227 531 aaKnown RBP24.23■■□□□ 1.47
USP6NL-204ENST00000606752 IRX3P78415 501 aaPredicted RBP24.23■■□□□ 1.47
USP6NL-204ENST00000606752 ACAD9Q9H845 621 aa24.23■■□□□ 1.47
USP6NL-204ENST00000606752 BLOC1S4Q9NUP1 217 aa24.23■■□□□ 1.47
USP6NL-204ENST00000606752 RMND1Q9NWS8 449 aa24.23■■□□□ 1.47
USP6NL-204ENST00000606752 KDM3AQ9Y4C1 1321 aa24.23■■□□□ 1.47
USP6NL-204ENST00000606752 SOCS7O14512 581 aa24.22■■□□□ 1.47
USP6NL-204ENST00000606752 RPN1P04843 607 aaKnown RBP24.22■■□□□ 1.47
USP6NL-204ENST00000606752 FKBP1BP68106 108 aa24.22■■□□□ 1.47
USP6NL-204ENST00000606752 CT47A1Q5JQC4 288 aaPredicted RBP24.22■■□□□ 1.47
USP6NL-204ENST00000606752 SV2BQ7L1I2 683 aa24.22■■□□□ 1.47
USP6NL-204ENST00000606752 NIPA1Q7RTP0 329 aa24.22■■□□□ 1.47
USP6NL-204ENST00000606752 SLC5A5Q92911 643 aa24.22■■□□□ 1.47
USP6NL-204ENST00000606752 RMDN3Q96TC7 470 aa24.22■■□□□ 1.47
USP6NL-204ENST00000606752 VAV3Q9UKW4 847 aa24.22■■□□□ 1.47
USP6NL-204ENST00000606752 BCRP11274 1271 aa24.21■■□□□ 1.47
USP6NL-204ENST00000606752 SEMA3FQ13275 785 aa24.21■■□□□ 1.47
USP6NL-204ENST00000606752 MOGSQ13724 837 aa24.21■■□□□ 1.47
USP6NL-204ENST00000606752 HAUS3Q68CZ6 603 aa24.21■■□□□ 1.47
USP6NL-204ENST00000606752 POTEEQ6S8J3 1075 aa24.21■■□□□ 1.47
USP6NL-204ENST00000606752 ERMNQ8TAM6 284 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms