RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 A2ML1A8K2U0 1454 aa4.92□□□□□ -1.62
IGHV3-29-201ENST00000604817 SPAG9O60271 1321 aaKnown RBP4.92□□□□□ -1.62
IGHV3-29-201ENST00000604817 CDK13Q14004 1512 aaKnown RBP4.92□□□□□ -1.62
IGHV3-29-201ENST00000604817 ALKQ9UM73 1620 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 TRBV23-1A0A0A0MS06 115 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 A0A1W2PQU0 124 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 PRAMEF27A3QJZ7 478 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 DCDC2CA8MYV0 355 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 DYNC1LI2O43237 492 aaPredicted RBP4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 NPTXRO95502 500 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 ZSCAN20P17040 1043 aaPredicted RBP4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 GRK4P32298 578 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 CAP2P40123 477 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 HTR3AP46098 478 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 LMOD3Q0VAK6 560 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 GRAMD1BQ3KR37 738 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 FAM83BQ5T0W9 1011 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 ZBTB37Q5TC79 503 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 YOD1Q5VVQ6 348 aaPredicted RBP4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 IL31Q6EBC2 164 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 KIAA1211LQ6NV74 962 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 CDC37L1Q7L3B6 337 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 NLRC3Q7RTR2 1065 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 C12orf40Q86WS4 652 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 HID1Q8IV36 788 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 MCATQ8IVS2 390 aaKnown RBP4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 MRPL41Q8IXM3 137 aaKnown RBP4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 AHI1Q8N157 1196 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 PPM1KQ8N3J5 372 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 PI4K2BQ8TCG2 481 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 JPH3Q8WXH2 748 aaPredicted RBP4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 FAM84AQ96KN4 292 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 FANCD2OSQ96PS1 177 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 PLCD4Q9BRC7 762 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 MTA3Q9BTC8 594 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 PUS7LQ9H0K6 701 aaKnown RBP4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 PHAXQ9H814 394 aaKnown RBP4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 PIDD1Q9HB75 910 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 ANAPC4Q9UJX5 808 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 PCDHB10Q9UN67 800 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 SPEF1Q9Y4P9 236 aa4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 CLTCQ00610 1675 aaKnown RBP4.91□□□□□ -1.62
IGHV3-29-201ENST00000604817 MYO3AQ8NEV4 1616 aa4.9□□□□□ -1.62
IGHV3-29-201ENST00000604817 CLIP1P30622 1438 aa4.9□□□□□ -1.62
IGHV3-29-201ENST00000604817 TROQ12816 1431 aaPredicted RBP4.9□□□□□ -1.62
IGHV3-29-201ENST00000604817 MED14O60244 1454 aa4.9□□□□□ -1.62
IGHV3-29-201ENST00000604817 POLR1AO95602 1720 aaPredicted RBP4.9□□□□□ -1.62
IGHV3-29-201ENST00000604817 SLC22A31A6NKX4 558 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 TNFRSF10CO14798 259 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 BRINP1O60477 761 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 RNASE1P07998 156 aaKnown RBP4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 IFIT2P09913 472 aaKnown RBP4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 FAM87AP0C7U9 286 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 CD8BP10966 210 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 COL6A1P12109 1028 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 NME1P15531 152 aaKnown RBP4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 CDK8P49336 464 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 NEK3P51956 506 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 HNRNPMP52272 730 aaKnown RBP eCLIP4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 BNIP3Q12983 259 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 MAPRE1Q15691 268 aaKnown RBP4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 SEPT7Q16181 437 aaKnown RBP4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 IFI16Q16666 785 aaKnown RBP4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 WDR78Q5VTH9 848 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 SLC6A19Q695T7 634 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 OVOS1Q6IE37 1185 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 CXorf57Q6NSI4 855 aaKnown RBP4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 PKN3Q6P5Z2 889 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 SPATS2Q86XZ4 545 aaKnown RBP4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 PLD6Q8N2A8 252 aaKnown RBP4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 CNTD1Q8N815 330 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 MYRIPQ8NFW9 859 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 PJA1Q8NG27 643 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 TIFAQ96CG3 184 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 HRASLS5Q96KN8 279 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 SARGQ9BW04 601 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 CNNM2Q9H8M5 875 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 MBNL3Q9NUK0 354 aaKnown RBP4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 FAM53CQ9NYF3 392 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 DAAM1Q9Y4D1 1078 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 CORINQ9Y5Q5 1042 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 VWDEQ8N2E2 1590 aa4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.9□□□□□ -1.63
IGHV3-29-201ENST00000604817 FAM135BQ49AJ0 1406 aa4.89□□□□□ -1.63
IGHV3-29-201ENST00000604817 LRRC7Q96NW7 1537 aa4.89□□□□□ -1.63
IGHV3-29-201ENST00000604817 TMEM265A0A087WTH1 108 aa4.89□□□□□ -1.63
IGHV3-29-201ENST00000604817 TRAV20A0A0B4J274 112 aa4.89□□□□□ -1.63
IGHV3-29-201ENST00000604817 CFAP69A5D8W1 941 aa4.89□□□□□ -1.63
IGHV3-29-201ENST00000604817 VSTM5A8MXK1 200 aa4.89□□□□□ -1.63
IGHV3-29-201ENST00000604817 RAG1P15918 1043 aa4.89□□□□□ -1.63
IGHV3-29-201ENST00000604817 SERPINB3P29508 390 aa4.89□□□□□ -1.63
IGHV3-29-201ENST00000604817 TCIRG1Q13488 830 aa4.89□□□□□ -1.63
IGHV3-29-201ENST00000604817 BBS9Q3SYG4 887 aa4.89□□□□□ -1.63
IGHV3-29-201ENST00000604817 TRIM61Q5EBN2 209 aa4.89□□□□□ -1.63
IGHV3-29-201ENST00000604817 PPM1JQ5JR12 505 aa4.89□□□□□ -1.63
IGHV3-29-201ENST00000604817 SYDE2Q5VT97 1194 aa4.89□□□□□ -1.63
IGHV3-29-201ENST00000604817 ARHGAP27Q6ZUM4 889 aa4.89□□□□□ -1.63
IGHV3-29-201ENST00000604817 SCUBE1Q8IWY4 988 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms