RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 ARFGAP2Q8N6H7 521 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 ABTB2Q8N961 1025 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 TRIM58Q8NG06 486 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 XAGE3Q8WTP9 111 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 NOC3LQ8WTT2 800 aaKnown RBP7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 OSBP2Q969R2 916 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 ARL8AQ96BM9 186 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 TMEM87BQ96K49 555 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 RNPC3Q96LT9 517 aaKnown RBP7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 CCDC43Q96MW1 224 aaKnown RBP7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 ZIM3Q96PE6 472 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 ATP6V0A4Q9HBG4 840 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 ARHGEF10LQ9HCE6 1279 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 MAGEC2Q9UBF1 373 aaPredicted RBP7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 KCNG1Q9UIX4 513 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 GGA2Q9UJY4 613 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 REXO2Q9Y3B8 237 aaKnown RBP7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 CHD4Q14839 1912 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 FRMD3A2A2Y4 597 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 BTBD18B2RXH4 712 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 RASSF9O75901 435 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 FAM107AO95990 144 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 TNFRSF8P28908 595 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 IL15P40933 162 aaPredicted RBP7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 GUCY1A3Q02108 690 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 ITIH3Q06033 890 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 PAK2Q13177 524 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 SPA17Q15506 151 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 TMEM132AQ24JP5 1023 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 CCDC96Q2M329 555 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 RABL6Q3YEC7 729 aaPredicted RBP7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 MSL1Q68DK7 614 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 ZNF662Q6ZS27 426 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 IFT20Q8IY31 132 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 MYCBPAPQ8TBZ2 947 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 APPBP2Q92624 585 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 PAGE5Q96GU1 130 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 SGSM3Q96HU1 749 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 FAXDC2Q96IV6 333 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 LRRC1Q9BTT6 524 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 FOXP1Q9H334 677 aaPredicted RBP7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 GPR108Q9NPR9 543 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 SEC31BQ9NQW1 1179 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 RWDD2AQ9UIY3 292 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 SLC12A7Q9Y666 1083 aa7.15□□□□□ -1.27
SRGAP2-211ENST00000604423 MYH6P13533 1939 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 MYH2Q9UKX2 1941 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 SLIT3O75094 1523 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 A0A087WZG4 1122 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 A0A1W2PRU2 124 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 HMGB1P1B2RPK0 211 aaPredicted RBP7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 GPAA1O43292 621 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 KRT14P02533 472 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 TCP1P17987 556 aaKnown RBP7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 TRIM21P19474 475 aaKnown RBP7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 GCKP35557 465 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 TIMM10P62072 90 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 SLC7A5Q01650 507 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 E2F5Q15329 346 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 OXLD1Q5BKU9 147 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 TMEM67Q5HYA8 995 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 NAIF1Q69YI7 327 aaPredicted RBP7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 MAATS1Q7Z4T9 603 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 RNF135Q8IUD6 432 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 TSEN2Q8NCE0 465 aaKnown RBP7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 MAGEC3Q8TD91 643 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 NELFBQ8WX92 580 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 CCT8L2Q96SF2 557 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 HINFPQ9BQA5 517 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 PYM1Q9BRP8 204 aaKnown RBP7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 SPATS2LQ9NUQ6 558 aaKnown RBP7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 RMND1Q9NWS8 449 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 AATFQ9NY61 560 aaKnown RBP eCLIP7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 SNX12Q9UMY4 172 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 HYOU1Q9Y4L1 999 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 PCDHB6Q9Y5E3 794 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 PXDNQ92626 1479 aa7.14□□□□□ -1.27
SRGAP2-211ENST00000604423 HEG1Q9ULI3 1381 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 TTC26A0AVF1 554 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 SRRM3A6NNA2 597 aaPredicted RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 PDE2AO00408 941 aaPredicted RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 RANBP6O60518 1105 aaKnown RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 BUB1BO60566 1050 aaPredicted RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 BMP15O95972 392 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 PDHBP11177 359 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 RHOQP17081 205 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 XBP1P17861 261 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 HPDP32754 393 aaPredicted RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 MDH1P40925 334 aaKnown RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 TOB1P50616 345 aaPredicted RBP7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 DPYDQ12882 1025 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 SEMA3FQ13275 785 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 BIRC2Q13490 618 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 LMBR1LQ6UX01 489 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 COPS6Q7L5N1 327 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 NPAS3Q8IXF0 933 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 CCDC170Q8IYT3 715 aa7.13□□□□□ -1.27
SRGAP2-211ENST00000604423 SPATA4Q8NEY3 305 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms