RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 CDK7P50613 346 aa13.29□□□□□ -0.28
CCDC12-209ENST00000604164 ITGA7Q13683 1181 aa13.29□□□□□ -0.28
CCDC12-209ENST00000604164 LAMC2Q13753 1193 aa13.29□□□□□ -0.28
CCDC12-209ENST00000604164 COL9A3Q14050 684 aaPredicted RBP13.29□□□□□ -0.28
CCDC12-209ENST00000604164 CCDC62Q6P9F0 684 aa13.29□□□□□ -0.28
CCDC12-209ENST00000604164 RAB11FIP4Q86YS3 637 aa13.29□□□□□ -0.28
CCDC12-209ENST00000604164 CMTR1Q8N1G2 835 aaKnown RBP13.29□□□□□ -0.28
CCDC12-209ENST00000604164 MTG1Q9BT17 334 aaPredicted RBP13.29□□□□□ -0.28
CCDC12-209ENST00000604164 AGXT2Q9BYV1 514 aa13.29□□□□□ -0.28
CCDC12-209ENST00000604164 ZSWIM6Q9HCJ5 1215 aa13.29□□□□□ -0.28
CCDC12-209ENST00000604164 PDLIM7Q9NR12 457 aa13.29□□□□□ -0.28
CCDC12-209ENST00000604164 SPDYE3A6NKU9 549 aa13.28□□□□□ -0.28
CCDC12-209ENST00000604164 KIAA0355O15063 1070 aa13.28□□□□□ -0.28
CCDC12-209ENST00000604164 MYL3P08590 195 aa13.28□□□□□ -0.28
CCDC12-209ENST00000604164 RAG1P15918 1043 aa13.28□□□□□ -0.28
CCDC12-209ENST00000604164 ANAPC15P60006 121 aa13.28□□□□□ -0.28
CCDC12-209ENST00000604164 MDM2Q00987 491 aaPredicted RBP13.28□□□□□ -0.28
CCDC12-209ENST00000604164 AKAP17AQ02040 695 aaKnown RBP13.28□□□□□ -0.28
CCDC12-209ENST00000604164 APOBRQ0VD83 1088 aa13.28□□□□□ -0.28
CCDC12-209ENST00000604164 TDHQ8IZJ6 230 aa13.28□□□□□ -0.28
CCDC12-209ENST00000604164 CCDC12Q8WUD4 166 aaPredicted RBP13.28□□□□□ -0.28
CCDC12-209ENST00000604164 EMID1Q96A84 441 aaPredicted RBP13.28□□□□□ -0.28
CCDC12-209ENST00000604164 V9GY48 417 aaPredicted RBP13.28□□□□□ -0.28
CCDC12-209ENST00000604164 FRMPD4Q14CM0 1322 aa13.28□□□□□ -0.28
CCDC12-209ENST00000604164 CNTNAP5Q8WYK1 1306 aa13.28□□□□□ -0.28
CCDC12-209ENST00000604164 BAZ2BQ9UIF8 2168 aaKnown RBP13.27□□□□□ -0.28
CCDC12-209ENST00000604164 SUPT20HL2P0C7V6 817 aa13.27□□□□□ -0.29
CCDC12-209ENST00000604164 CPA1P15085 419 aa13.27□□□□□ -0.29
CCDC12-209ENST00000604164 NAPAP54920 295 aa13.27□□□□□ -0.29
CCDC12-209ENST00000604164 IRX5P78411 483 aaPredicted RBP13.27□□□□□ -0.29
CCDC12-209ENST00000604164 PURAQ00577 322 aaKnown RBP13.27□□□□□ -0.29
CCDC12-209ENST00000604164 FAAP100Q0VG06 881 aa13.27□□□□□ -0.29
CCDC12-209ENST00000604164 DGKDQ16760 1214 aa13.27□□□□□ -0.29
CCDC12-209ENST00000604164 LY6KQ17RY6 165 aa13.27□□□□□ -0.29
CCDC12-209ENST00000604164 PCNX4Q63HM2 1172 aa13.27□□□□□ -0.29
CCDC12-209ENST00000604164 MCTP2Q6DN12 878 aa13.27□□□□□ -0.29
CCDC12-209ENST00000604164 NLRX1Q86UT6 975 aa13.27□□□□□ -0.29
CCDC12-209ENST00000604164 DHX37Q8IY37 1157 aaKnown RBP13.27□□□□□ -0.29
CCDC12-209ENST00000604164 SLC43A3Q8NBI5 491 aa13.27□□□□□ -0.29
CCDC12-209ENST00000604164 PPTC7Q8NI37 304 aa13.27□□□□□ -0.29
CCDC12-209ENST00000604164 CDHR1Q96JP9 859 aa13.27□□□□□ -0.29
CCDC12-209ENST00000604164 KATNAL1Q9BW62 490 aa13.27□□□□□ -0.29
CCDC12-209ENST00000604164 DDX41Q9UJV9 622 aaKnown RBP13.27□□□□□ -0.29
CCDC12-209ENST00000604164 NID2Q14112 1375 aa13.27□□□□□ -0.29
CCDC12-209ENST00000604164 TRIM43BA6NCK2 446 aa13.26□□□□□ -0.29
CCDC12-209ENST00000604164 MEIS2O14770 477 aa13.26□□□□□ -0.29
CCDC12-209ENST00000604164 ARIH2O95376 493 aa13.26□□□□□ -0.29
CCDC12-209ENST00000604164 FOSP01100 380 aaPredicted RBP13.26□□□□□ -0.29
CCDC12-209ENST00000604164 ADCY7P51828 1080 aa13.26□□□□□ -0.29
CCDC12-209ENST00000604164 EVCP57679 992 aa13.26□□□□□ -0.29
CCDC12-209ENST00000604164 PTPN11Q06124 597 aaPredicted RBP13.26□□□□□ -0.29
CCDC12-209ENST00000604164 FUT2Q10981 343 aa13.26□□□□□ -0.29
CCDC12-209ENST00000604164 NEDD9Q14511 834 aa13.26□□□□□ -0.29
CCDC12-209ENST00000604164 NFRKBQ6P4R8 1299 aa13.26□□□□□ -0.29
CCDC12-209ENST00000604164 CPLX2Q6PUV4 134 aaKnown RBP13.26□□□□□ -0.29
CCDC12-209ENST00000604164 USP17L6PQ6QN14 398 aa13.26□□□□□ -0.29
CCDC12-209ENST00000604164 FAM126BQ8IXS8 530 aa13.26□□□□□ -0.29
CCDC12-209ENST00000604164 GIMAP8Q8ND71 665 aaPredicted RBP13.26□□□□□ -0.29
CCDC12-209ENST00000604164 AFG1LQ8WV93 481 aa13.26□□□□□ -0.29
CCDC12-209ENST00000604164 COPS5Q92905 334 aa13.26□□□□□ -0.29
CCDC12-209ENST00000604164 TRIM43Q96BQ3 446 aaPredicted RBP13.26□□□□□ -0.29
CCDC12-209ENST00000604164 BARHL2Q9NY43 387 aa13.26□□□□□ -0.29
CCDC12-209ENST00000604164 hCG_1642624A0A1W2PR95 340 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 FIBPO43427 364 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 TIMP1P01033 207 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 CDC27P30260 824 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 ICAM3P32942 547 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 ARHGAP1Q07960 439 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 PFKFB3Q16875 520 aaPredicted RBP13.25□□□□□ -0.29
CCDC12-209ENST00000604164 CELF3Q5SZQ8 465 aaKnown RBP13.25□□□□□ -0.29
CCDC12-209ENST00000604164 TMEM63BQ5T3F8 832 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 WWC2Q6AWC2 1192 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 SH3RF1Q7Z6J0 888 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 TRIM22Q8IYM9 498 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 TMEM199Q8N511 208 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 GPKOWQ92917 476 aaPredicted RBP eCLIP13.25□□□□□ -0.29
CCDC12-209ENST00000604164 BADQ92934 168 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 ZNF274Q96GC6 653 aaPredicted RBP13.25□□□□□ -0.29
CCDC12-209ENST00000604164 INPP4AQ96PE3 977 aaPredicted RBP13.25□□□□□ -0.29
CCDC12-209ENST00000604164 MLXIPQ9HAP2 919 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 RIC8AQ9NPQ8 531 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 FAM217BQ9NTX9 383 aaPredicted RBP13.25□□□□□ -0.29
CCDC12-209ENST00000604164 PDRG1Q9NUG6 133 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 TBX21Q9UL17 535 aa13.25□□□□□ -0.29
CCDC12-209ENST00000604164 CEP290O15078 2479 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 CPLX1O14810 134 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 MAFGO15525 162 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 PRPF3O43395 683 aaKnown RBP13.24□□□□□ -0.29
CCDC12-209ENST00000604164 PPFIA4O75335 1185 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 CD4P01730 458 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 MMP3P08254 477 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 SCG2P13521 617 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 PTGS1P23219 599 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 PDIA3P30101 505 aaKnown RBP13.24□□□□□ -0.29
CCDC12-209ENST00000604164 ADD1P35611 737 aaKnown RBP13.24□□□□□ -0.29
CCDC12-209ENST00000604164 FXR1P51114 621 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCDC12-209ENST00000604164 PSMC6P62333 389 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 FPGSQ05932 587 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 AP3B2Q13367 1082 aa13.24□□□□□ -0.29
CCDC12-209ENST00000604164 ANKRD1Q15327 319 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms