RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 TMTC2Q8N394 836 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 SAMD3Q8N6K7 520 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 CCDC136Q96JN2 1154 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 SPZ1Q9BXG8 430 aa18.95■□□□□ 0.62
TUBE1-206ENST00000603722 DDX41Q9UJV9 622 aaKnown RBP18.95■□□□□ 0.62
TUBE1-206ENST00000603722 CYP2C9P11712 490 aa18.94■□□□□ 0.62
TUBE1-206ENST00000603722 LIFRP42702 1097 aa18.94■□□□□ 0.62
TUBE1-206ENST00000603722 TMEM240Q5SV17 173 aa18.94■□□□□ 0.62
TUBE1-206ENST00000603722 PSRC1Q6PGN9 363 aaPredicted RBP18.94■□□□□ 0.62
TUBE1-206ENST00000603722 RRP36Q96EU6 259 aaKnown RBP18.94■□□□□ 0.62
TUBE1-206ENST00000603722 GUCD1Q96NT3 240 aa18.94■□□□□ 0.62
TUBE1-206ENST00000603722 WNT8AQ9H1J5 351 aa18.94■□□□□ 0.62
TUBE1-206ENST00000603722 SEC63Q9UGP8 760 aaKnown RBP18.94■□□□□ 0.62
TUBE1-206ENST00000603722 STXBP5LQ9Y2K9 1186 aa18.94■□□□□ 0.62
TUBE1-206ENST00000603722 SLC12A7Q9Y666 1083 aa18.94■□□□□ 0.62
TUBE1-206ENST00000603722 RGS20O76081 388 aa18.93■□□□□ 0.62
TUBE1-206ENST00000603722 SUPT20HL2P0C7V6 817 aa18.93■□□□□ 0.62
TUBE1-206ENST00000603722 CCND2P30279 289 aa18.93■□□□□ 0.62
TUBE1-206ENST00000603722 GNAQP50148 359 aa18.93■□□□□ 0.62
TUBE1-206ENST00000603722 ZNF365Q70YC5 407 aa18.93■□□□□ 0.62
TUBE1-206ENST00000603722 VSIG10LQ86VR7 867 aa18.93■□□□□ 0.62
TUBE1-206ENST00000603722 CMTR1Q8N1G2 835 aaKnown RBP18.93■□□□□ 0.62
TUBE1-206ENST00000603722 SRBD1Q8N5C6 995 aaKnown RBP18.93■□□□□ 0.62
TUBE1-206ENST00000603722 ZFP91Q96JP5 570 aaPredicted RBP18.93■□□□□ 0.62
TUBE1-206ENST00000603722 LZTS2Q9BRK4 669 aa18.93■□□□□ 0.62
TUBE1-206ENST00000603722 IL23AQ9NPF7 189 aa18.93■□□□□ 0.62
TUBE1-206ENST00000603722 COL6A3P12111 3177 aa18.92■□□□□ 0.62
TUBE1-206ENST00000603722 SORBS3O60504 671 aa18.92■□□□□ 0.62
TUBE1-206ENST00000603722 CALM1P0DP23 149 aa18.92■□□□□ 0.62
TUBE1-206ENST00000603722 CALM2P0DP24 149 aa18.92■□□□□ 0.62
TUBE1-206ENST00000603722 CALM3P0DP25 149 aa18.92■□□□□ 0.62
TUBE1-206ENST00000603722 NFRKBQ6P4R8 1299 aa18.92■□□□□ 0.62
TUBE1-206ENST00000603722 MICU3Q86XE3 530 aa18.92■□□□□ 0.62
TUBE1-206ENST00000603722 SCLYQ96I15 445 aa18.92■□□□□ 0.62
TUBE1-206ENST00000603722 NEK1Q96PY6 1258 aa18.92■□□□□ 0.62
TUBE1-206ENST00000603722 CDH23Q9H251 3354 aa18.92■□□□□ 0.62
TUBE1-206ENST00000603722 CASTP20810 708 aaKnown RBP18.91■□□□□ 0.62
TUBE1-206ENST00000603722 SMARCA1P28370 1054 aa18.91■□□□□ 0.62
TUBE1-206ENST00000603722 LAMC2Q13753 1193 aa18.91■□□□□ 0.62
TUBE1-206ENST00000603722 DHX37Q8IY37 1157 aaKnown RBP18.91■□□□□ 0.62
TUBE1-206ENST00000603722 EMID1Q96A84 441 aaPredicted RBP18.91■□□□□ 0.62
TUBE1-206ENST00000603722 TTYH1Q9H313 450 aaPredicted RBP18.91■□□□□ 0.62
TUBE1-206ENST00000603722 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.9■□□□□ 0.62
TUBE1-206ENST00000603722 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.9■□□□□ 0.62
TUBE1-206ENST00000603722 UBA1P22314 1058 aaKnown RBP18.9■□□□□ 0.62
TUBE1-206ENST00000603722 PTPN11Q06124 597 aaPredicted RBP18.9■□□□□ 0.62
TUBE1-206ENST00000603722 DGKDQ16760 1214 aa18.9■□□□□ 0.62
TUBE1-206ENST00000603722 RASIP1Q5U651 963 aa18.9■□□□□ 0.62
TUBE1-206ENST00000603722 SGMS1Q86VZ5 419 aa18.9■□□□□ 0.62
TUBE1-206ENST00000603722 RASEFQ8IZ41 740 aa18.9■□□□□ 0.62
TUBE1-206ENST00000603722 PPTC7Q8NI37 304 aa18.9■□□□□ 0.62
TUBE1-206ENST00000603722 KAT2BQ92831 832 aa18.9■□□□□ 0.62
TUBE1-206ENST00000603722 TCEANC2Q96MN5 208 aa18.9■□□□□ 0.62
TUBE1-206ENST00000603722 SEMA6BQ9H3T3 888 aa18.9■□□□□ 0.62
TUBE1-206ENST00000603722 NOD1Q9Y239 953 aa18.9■□□□□ 0.62
TUBE1-206ENST00000603722 FRMPD4Q14CM0 1322 aa18.9■□□□□ 0.62
TUBE1-206ENST00000603722 hCG_1642624A0A1W2PR95 340 aa18.89■□□□□ 0.61
TUBE1-206ENST00000603722 GGPS1O95749 300 aa18.89■□□□□ 0.61
TUBE1-206ENST00000603722 ZNF286BP0CG31 522 aa18.89■□□□□ 0.61
TUBE1-206ENST00000603722 DNAJB2P25686 324 aa18.89■□□□□ 0.61
TUBE1-206ENST00000603722 ADCK5Q3MIX3 580 aa18.89■□□□□ 0.61
TUBE1-206ENST00000603722 KCNV1Q6PIU1 500 aa18.89■□□□□ 0.61
TUBE1-206ENST00000603722 USP17L6PQ6QN14 398 aa18.89■□□□□ 0.61
TUBE1-206ENST00000603722 SYNE3Q6ZMZ3 975 aa18.89■□□□□ 0.61
TUBE1-206ENST00000603722 TMTC3Q6ZXV5 915 aa18.89■□□□□ 0.61
TUBE1-206ENST00000603722 OTOP2Q7RTS6 562 aa18.89■□□□□ 0.61
TUBE1-206ENST00000603722 CCDC82Q8N4S0 544 aa18.89■□□□□ 0.61
TUBE1-206ENST00000603722 SMARCC2Q8TAQ2 1214 aa18.89■□□□□ 0.61
TUBE1-206ENST00000603722 GPKOWQ92917 476 aaPredicted RBP eCLIP18.89■□□□□ 0.61
TUBE1-206ENST00000603722 CUL5Q93034 780 aa18.89■□□□□ 0.61
TUBE1-206ENST00000603722 SPATA33Q96N06 139 aa18.89■□□□□ 0.61
TUBE1-206ENST00000603722 CXXC1Q9P0U4 656 aaPredicted RBP18.89■□□□□ 0.61
TUBE1-206ENST00000603722 GRXCR1A8MXD5 290 aa18.88■□□□□ 0.61
TUBE1-206ENST00000603722 FGBP02675 491 aa18.88■□□□□ 0.61
TUBE1-206ENST00000603722 SP2Q02086 613 aa18.88■□□□□ 0.61
TUBE1-206ENST00000603722 CELF3Q5SZQ8 465 aaKnown RBP18.88■□□□□ 0.61
TUBE1-206ENST00000603722 FANCBQ8NB91 859 aa18.88■□□□□ 0.61
TUBE1-206ENST00000603722 HERVK_113Q902F9 699 aa18.88■□□□□ 0.61
TUBE1-206ENST00000603722 CDX2Q99626 313 aaPredicted RBP18.88■□□□□ 0.61
TUBE1-206ENST00000603722 MTIF3Q9H2K0 278 aaKnown RBP18.88■□□□□ 0.61
TUBE1-206ENST00000603722 TMEM265A0A087WTH1 108 aa18.87■□□□□ 0.61
TUBE1-206ENST00000603722 F2P00734 622 aa18.87■□□□□ 0.61
TUBE1-206ENST00000603722 PBX2P40425 430 aa18.87■□□□□ 0.61
TUBE1-206ENST00000603722 PSEN2P49810 448 aa18.87■□□□□ 0.61
TUBE1-206ENST00000603722 MRPS9P82933 396 aaKnown RBP18.87■□□□□ 0.61
TUBE1-206ENST00000603722 KRT32Q14532 448 aa18.87■□□□□ 0.61
TUBE1-206ENST00000603722 PTGISQ16647 500 aa18.87■□□□□ 0.61
TUBE1-206ENST00000603722 HSDL1Q3SXM5 330 aa18.87■□□□□ 0.61
TUBE1-206ENST00000603722 GNPTABQ3T906 1256 aa18.87■□□□□ 0.61
TUBE1-206ENST00000603722 MYSM1Q5VVJ2 828 aa18.87■□□□□ 0.61
TUBE1-206ENST00000603722 GDF6Q6KF10 455 aaPredicted RBP18.87■□□□□ 0.61
TUBE1-206ENST00000603722 APOA5Q6Q788 366 aa18.87■□□□□ 0.61
TUBE1-206ENST00000603722 DHX32Q7L7V1 743 aaKnown RBP18.87■□□□□ 0.61
TUBE1-206ENST00000603722 RPUSD2Q8IZ73 545 aaKnown RBP18.87■□□□□ 0.61
TUBE1-206ENST00000603722 ALG1Q9BT22 464 aa18.87■□□□□ 0.61
TUBE1-206ENST00000603722 KATNAL1Q9BW62 490 aa18.87■□□□□ 0.61
TUBE1-206ENST00000603722 PIK3CDO00329 1044 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 MEIS2O14770 477 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 TGFB3P10600 412 aa18.86■□□□□ 0.61
TUBE1-206ENST00000603722 EXOSC10Q01780 885 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms