RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 KCNAB2Q13303 367 aa8.14□□□□□ -1.11
TUBE1-205ENST00000603651 SLC10A6Q3KNW5 377 aa8.14□□□□□ -1.11
TUBE1-205ENST00000603651 E4F1Q66K89 784 aaPredicted RBP8.14□□□□□ -1.11
TUBE1-205ENST00000603651 CD300LDQ6UXZ3 194 aa8.14□□□□□ -1.11
TUBE1-205ENST00000603651 LIPIQ6XZB0 460 aa8.14□□□□□ -1.11
TUBE1-205ENST00000603651 MILR1Q7Z6M3 343 aa8.14□□□□□ -1.11
TUBE1-205ENST00000603651 FAM26EQ8N5C1 309 aa8.14□□□□□ -1.11
TUBE1-205ENST00000603651 KREMEN2Q8NCW0 462 aa8.14□□□□□ -1.11
TUBE1-205ENST00000603651 RCBTB1Q8NDN9 531 aa8.14□□□□□ -1.11
TUBE1-205ENST00000603651 TMEM169Q96HH4 297 aa8.14□□□□□ -1.11
TUBE1-205ENST00000603651 USP40Q9NVE5 1235 aa8.14□□□□□ -1.11
TUBE1-205ENST00000603651 PALD1Q9ULE6 856 aa8.14□□□□□ -1.11
TUBE1-205ENST00000603651 COA3Q9Y2R0 106 aaPredicted RBP8.14□□□□□ -1.11
TUBE1-205ENST00000603651 CPP00450 1065 aa8.13□□□□□ -1.11
TUBE1-205ENST00000603651 C8BP07358 591 aa8.13□□□□□ -1.11
TUBE1-205ENST00000603651 CYP2C8P10632 490 aa8.13□□□□□ -1.11
TUBE1-205ENST00000603651 GFRA1P56159 465 aa8.13□□□□□ -1.11
TUBE1-205ENST00000603651 NT5DC1Q5TFE4 455 aa8.13□□□□□ -1.11
TUBE1-205ENST00000603651 SAPCD2Q86UD0 394 aa8.13□□□□□ -1.11
TUBE1-205ENST00000603651 NLRP10Q86W26 655 aa8.13□□□□□ -1.11
TUBE1-205ENST00000603651 SEC14L1Q92503 715 aa8.13□□□□□ -1.11
TUBE1-205ENST00000603651 YIPF4Q9BSR8 244 aa8.13□□□□□ -1.11
TUBE1-205ENST00000603651 RTEL1Q9NZ71 1219 aa8.13□□□□□ -1.11
TUBE1-205ENST00000603651 SYN1P17600 705 aa8.12□□□□□ -1.11
TUBE1-205ENST00000603651 LTBRP36941 435 aa8.12□□□□□ -1.11
TUBE1-205ENST00000603651 STAT5AP42229 794 aa8.12□□□□□ -1.11
TUBE1-205ENST00000603651 PPP2R2AP63151 447 aa8.12□□□□□ -1.11
TUBE1-205ENST00000603651 HTRA3P83110 453 aa8.12□□□□□ -1.11
TUBE1-205ENST00000603651 DENND5AQ6IQ26 1287 aa8.12□□□□□ -1.11
TUBE1-205ENST00000603651 ETV3LQ6ZN32 361 aa8.12□□□□□ -1.11
TUBE1-205ENST00000603651 CPA5Q8WXQ8 436 aa8.12□□□□□ -1.11
TUBE1-205ENST00000603651 CCDC140Q96MF4 163 aa8.12□□□□□ -1.11
TUBE1-205ENST00000603651 CLDND1Q9NY35 253 aa8.12□□□□□ -1.11
TUBE1-205ENST00000603651 SMARCA5O60264 1052 aaPredicted RBP8.11□□□□□ -1.11
TUBE1-205ENST00000603651 DDX1Q92499 740 aaKnown RBP8.11□□□□□ -1.11
TUBE1-205ENST00000603651 GORASP1Q9BQQ3 440 aa8.11□□□□□ -1.11
TUBE1-205ENST00000603651 IER2Q9BTL4 223 aa8.11□□□□□ -1.11
TUBE1-205ENST00000603651 PPP1R1BQ9UD71 204 aaPredicted RBP8.11□□□□□ -1.11
TUBE1-205ENST00000603651 A0A1W2PQU0 124 aa8.1□□□□□ -1.11
TUBE1-205ENST00000603651 SCG5P05408 212 aa8.1□□□□□ -1.11
TUBE1-205ENST00000603651 GTF2A2P52657 109 aa8.1□□□□□ -1.11
TUBE1-205ENST00000603651 LSAMPQ13449 338 aa8.1□□□□□ -1.11
TUBE1-205ENST00000603651 DDR2Q16832 855 aa8.1□□□□□ -1.11
TUBE1-205ENST00000603651 MROH9Q5TGP6 573 aa8.1□□□□□ -1.11
TUBE1-205ENST00000603651 TTLL7Q6ZT98 887 aa8.1□□□□□ -1.11
TUBE1-205ENST00000603651 USP53Q70EK8 1073 aa8.1□□□□□ -1.11
TUBE1-205ENST00000603651 CARFQ8N187 725 aa8.1□□□□□ -1.11
TUBE1-205ENST00000603651 SPATA6Q9NWH7 488 aaPredicted RBP8.1□□□□□ -1.11
TUBE1-205ENST00000603651 E9PSI1 815 aa8.09□□□□□ -1.11
TUBE1-205ENST00000603651 SARSP49591 514 aaKnown RBP8.09□□□□□ -1.11
TUBE1-205ENST00000603651 RBM10P98175 930 aaKnown RBP8.09□□□□□ -1.11
TUBE1-205ENST00000603651 CAP1Q01518 475 aa8.09□□□□□ -1.11
TUBE1-205ENST00000603651 DLX2Q07687 328 aaPredicted RBP8.09□□□□□ -1.11
TUBE1-205ENST00000603651 FERMT3Q86UX7 667 aa8.09□□□□□ -1.11
TUBE1-205ENST00000603651 KCTD13Q8WZ19 329 aa8.09□□□□□ -1.11
TUBE1-205ENST00000603651 KRTAP4-9Q9BYQ8 210 aa8.09□□□□□ -1.11
TUBE1-205ENST00000603651 EPN3Q9H201 632 aa8.09□□□□□ -1.11
TUBE1-205ENST00000603651 PODXL2Q9NZ53 605 aa8.09□□□□□ -1.11
TUBE1-205ENST00000603651 NTMQ9P121 344 aa8.09□□□□□ -1.11
TUBE1-205ENST00000603651 ACBD5Q5T8D3 534 aaPredicted RBP8.08□□□□□ -1.12
TUBE1-205ENST00000603651 ZC3H18Q86VM9 953 aaKnown RBP8.08□□□□□ -1.12
TUBE1-205ENST00000603651 SLC43A3Q8NBI5 491 aa8.08□□□□□ -1.12
TUBE1-205ENST00000603651 BDH2Q9BUT1 245 aa8.08□□□□□ -1.12
TUBE1-205ENST00000603651 TRIM55Q9BYV6 548 aa8.08□□□□□ -1.12
TUBE1-205ENST00000603651 X6R8D5 127 aa8.08□□□□□ -1.12
TUBE1-205ENST00000603651 SH3D21A4FU49 640 aa8.07□□□□□ -1.12
TUBE1-205ENST00000603651 PRODHO43272 600 aa8.07□□□□□ -1.12
TUBE1-205ENST00000603651 PRICKLE3O43900 615 aaPredicted RBP8.07□□□□□ -1.12
TUBE1-205ENST00000603651 SLC6A11P48066 632 aa8.07□□□□□ -1.12
TUBE1-205ENST00000603651 RTP5Q14D33 572 aa8.07□□□□□ -1.12
TUBE1-205ENST00000603651 UBXN11Q5T124 520 aa8.07□□□□□ -1.12
TUBE1-205ENST00000603651 ERICH6BQ5W0A0 696 aa8.07□□□□□ -1.12
TUBE1-205ENST00000603651 STEAP3Q658P3 488 aa8.07□□□□□ -1.12
TUBE1-205ENST00000603651 FRMD5Q7Z6J6 570 aa8.07□□□□□ -1.12
TUBE1-205ENST00000603651 RIOX2Q8IUF8 465 aa8.07□□□□□ -1.12
TUBE1-205ENST00000603651 TEPSINQ96N21 525 aa8.07□□□□□ -1.12
TUBE1-205ENST00000603651 KLF4O43474 513 aa8.06□□□□□ -1.12
TUBE1-205ENST00000603651 CELA3BP08861 270 aa8.06□□□□□ -1.12
TUBE1-205ENST00000603651 GJA9P57773 515 aa8.06□□□□□ -1.12
TUBE1-205ENST00000603651 HSP90AA2PQ14568 343 aaPredicted RBP8.06□□□□□ -1.12
TUBE1-205ENST00000603651 SLC35F1Q5T1Q4 408 aa8.06□□□□□ -1.12
TUBE1-205ENST00000603651 FAM126BQ8IXS8 530 aa8.06□□□□□ -1.12
TUBE1-205ENST00000603651 CXorf38Q8TB03 319 aa8.06□□□□□ -1.12
TUBE1-205ENST00000603651 C1orf159Q96HA4 380 aa8.06□□□□□ -1.12
TUBE1-205ENST00000603651 C11orf84Q9BUA3 381 aaPredicted RBP8.06□□□□□ -1.12
TUBE1-205ENST00000603651 PHF20Q9BVI0 1012 aa8.06□□□□□ -1.12
TUBE1-205ENST00000603651 JAM3Q9BX67 310 aa8.06□□□□□ -1.12
TUBE1-205ENST00000603651 PPARGC1AQ9UBK2 798 aaKnown RBP8.06□□□□□ -1.12
TUBE1-205ENST00000603651 PCDHB4Q9Y5E5 795 aa8.06□□□□□ -1.12
TUBE1-205ENST00000603651 CCDC85CA6NKD9 419 aa8.05□□□□□ -1.12
TUBE1-205ENST00000603651 H7BY64 318 aa8.05□□□□□ -1.12
TUBE1-205ENST00000603651 HGSO14964 777 aaPredicted RBP8.05□□□□□ -1.12
TUBE1-205ENST00000603651 DLX3O60479 287 aa8.05□□□□□ -1.12
TUBE1-205ENST00000603651 MSCO60682 206 aa8.05□□□□□ -1.12
TUBE1-205ENST00000603651 STK10O94804 968 aaKnown RBP8.05□□□□□ -1.12
TUBE1-205ENST00000603651 MIB1Q86YT6 1006 aa8.05□□□□□ -1.12
TUBE1-205ENST00000603651 ARRDC4Q8NCT1 418 aa8.05□□□□□ -1.12
TUBE1-205ENST00000603651 ZSWIM3Q96MP5 696 aa8.05□□□□□ -1.12
TUBE1-205ENST00000603651 AARSD1Q9BTE6 412 aaKnown RBP8.05□□□□□ -1.12
TUBE1-205ENST00000603651 BLACEA4D250 179 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms