RNA–Protein interactions for RNA: ENST00000603380.5

ZNF559-213, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-213ENST00000603380 IGDCC4Q8TDY8 1250 aa12.3□□□□□ -0.44
ZNF559-213ENST00000603380 CNOT10Q9H9A5 744 aaKnown RBP12.3□□□□□ -0.44
ZNF559-213ENST00000603380 IFIT1P09914 478 aaKnown RBP12.3□□□□□ -0.44
ZNF559-213ENST00000603380 KIF11P52732 1056 aa12.3□□□□□ -0.44
ZNF559-213ENST00000603380 CUL3Q13618 768 aa12.3□□□□□ -0.44
ZNF559-213ENST00000603380 HLTFQ14527 1009 aaKnown RBP eCLIP12.3□□□□□ -0.44
ZNF559-213ENST00000603380 CCDC38Q502W7 563 aa12.3□□□□□ -0.44
ZNF559-213ENST00000603380 TBC1D10CQ8IV04 446 aa12.3□□□□□ -0.44
ZNF559-213ENST00000603380 LRRC45Q96CN5 670 aa12.3□□□□□ -0.44
ZNF559-213ENST00000603380 TLCD1Q96CP7 247 aa12.3□□□□□ -0.44
ZNF559-213ENST00000603380 NEUROG2Q9H2A3 272 aa12.3□□□□□ -0.44
ZNF559-213ENST00000603380 EXOC1Q9NV70 894 aa12.3□□□□□ -0.44
ZNF559-213ENST00000603380 PCMTD2Q9NV79 361 aa12.3□□□□□ -0.44
ZNF559-213ENST00000603380 TECPR2O15040 1411 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 FAM205CA6NFA0 338 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 PJA2O43164 708 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 ZPR1O75312 459 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 VIMP08670 466 aaKnown RBP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 IFNAR1P17181 557 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 ALDH3A1P30838 453 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 HNRNPH3P31942 346 aaKnown RBP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 LBRQ14739 615 aaKnown RBP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 SGSM1Q2NKQ1 1148 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 CCDC57Q2TAC2 916 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 GALNTL6Q49A17 601 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 TYW1BQ6NUM6 668 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 PDXDC2PQ6P474 469 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 RIC3Q7Z5B4 369 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 ANKRD13CQ8N6S4 541 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 KCNV2Q8TDN2 545 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 LPIN2Q92539 896 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 INPP4AQ96PE3 977 aaPredicted RBP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 FBXL5Q9UKA1 691 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 PLAGL2Q9UPG8 496 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 THRAP3Q9Y2W1 955 aaKnown RBP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 PCDHGA4Q9Y5G9 962 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 MRPS35P82673 323 aaKnown RBP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 TRIM68Q6AZZ1 485 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 CACNA2D4Q7Z3S7 1137 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 SGMS1Q86VZ5 419 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 LRRC34Q8IZ02 419 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 ATXN2LQ8WWM7 1075 aaKnown RBP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 WASF1Q92558 559 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 PLEKHG4BQ96PX9 1271 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 MTFR1LQ9H019 292 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 PUS7LQ9H0K6 701 aaKnown RBP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 THAP9Q9H5L6 903 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 ECT2Q9H8V3 914 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 LY9Q9HBG7 655 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 DDX21Q9NR30 783 aaKnown RBP eCLIP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 ARHGEF3Q9NR81 526 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 SOS2Q07890 1332 aaPredicted RBP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 MYH1P12882 1939 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 A0A1W2PQJ5 194 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 GRID2IPA4D2P6 1211 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 BHMG1C9JSJ3 638 aaPredicted RBP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 SART1O43290 800 aaKnown RBP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 GTPBP6O43824 516 aaPredicted RBP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 FLT3P36888 993 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 ATG9AQ7Z3C6 839 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 ADSSL1Q8N142 457 aa12.29□□□□□ -0.44
ZNF559-213ENST00000603380 LTV1Q96GA3 475 aaPredicted RBP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 ELAC2Q9BQ52 826 aaKnown RBP12.29□□□□□ -0.44
ZNF559-213ENST00000603380 SPEF2Q9C093 1822 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 TRIM75PA6NK02 468 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 GNAZP19086 355 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 MSH2P43246 934 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 KIAA0753Q2KHM9 967 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 FIGNQ5HY92 759 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 ANKRD23Q86SG2 305 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 DDX42Q86XP3 938 aaKnown RBP eCLIP12.28□□□□□ -0.44
ZNF559-213ENST00000603380 KIF2BQ8N4N8 673 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 BICD1Q96G01 975 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 TMEM59LQ9UK28 342 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 WNT7AO00755 349 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 BUB1O43683 1085 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 EIF4A3P38919 411 aaKnown RBP12.28□□□□□ -0.44
ZNF559-213ENST00000603380 NEXNQ0ZGT2 675 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 CUL1Q13616 776 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 LRRC23Q53EV4 343 aaPredicted RBP12.28□□□□□ -0.44
ZNF559-213ENST00000603380 UBLCP1Q8WVY7 318 aaPredicted RBP12.28□□□□□ -0.44
ZNF559-213ENST00000603380 FAM163AQ96GL9 167 aaPredicted RBP12.28□□□□□ -0.44
ZNF559-213ENST00000603380 TUBGCP2Q9BSJ2 902 aa12.28□□□□□ -0.44
ZNF559-213ENST00000603380 RPN1P04843 607 aaKnown RBP12.27□□□□□ -0.44
ZNF559-213ENST00000603380 MMEP08473 750 aa12.27□□□□□ -0.44
ZNF559-213ENST00000603380 CHN1P15882 459 aa12.27□□□□□ -0.44
ZNF559-213ENST00000603380 ZNF131P52739 623 aa12.27□□□□□ -0.44
ZNF559-213ENST00000603380 KRT71Q3SY84 523 aa12.27□□□□□ -0.44
ZNF559-213ENST00000603380 SDCCAG8Q86SQ7 713 aaPredicted RBP12.27□□□□□ -0.44
ZNF559-213ENST00000603380 FERMT2Q96AC1 680 aa12.27□□□□□ -0.44
ZNF559-213ENST00000603380 TMEM87BQ96K49 555 aa12.27□□□□□ -0.44
ZNF559-213ENST00000603380 NOX5Q96PH1 765 aa12.27□□□□□ -0.44
ZNF559-213ENST00000603380 MYD88Q99836 296 aa12.27□□□□□ -0.44
ZNF559-213ENST00000603380 UBAC1Q9BSL1 405 aa12.27□□□□□ -0.44
ZNF559-213ENST00000603380 MMTAG2Q9BU76 263 aaKnown RBP12.27□□□□□ -0.44
ZNF559-213ENST00000603380 TRIM4Q9C037 500 aa12.27□□□□□ -0.44
ZNF559-213ENST00000603380 ADAM7Q9H2U9 754 aa12.27□□□□□ -0.44
ZNF559-213ENST00000603380 DIP2CQ9Y2E4 1556 aa12.27□□□□□ -0.44
ZNF559-213ENST00000603380 A0A0G2JS52 829 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms