RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 PGK1P00558 417 aa18.34■□□□□ 0.53
PPFIA3-213ENST00000602905 MLLT1Q03111 559 aaPredicted RBP18.34■□□□□ 0.53
PPFIA3-213ENST00000602905 GNPTABQ3T906 1256 aa18.34■□□□□ 0.53
PPFIA3-213ENST00000602905 DUSP28Q4G0W2 176 aa18.34■□□□□ 0.53
PPFIA3-213ENST00000602905 KCNV1Q6PIU1 500 aa18.34■□□□□ 0.53
PPFIA3-213ENST00000602905 Q9Y3F1 56 aa18.34■□□□□ 0.53
PPFIA3-213ENST00000602905 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 C6orf222P0C671 652 aaPredicted RBP18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 TXNP10599 105 aaKnown RBP18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 SMPD1P17405 629 aa18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 LRRC41Q15345 812 aa18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 BRDTQ58F21 947 aaPredicted RBP18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 GJC2Q5T442 439 aaPredicted RBP18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 PCNX4Q63HM2 1172 aa18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 TLK2Q86UE8 772 aa18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 CCDC83Q8IWF9 413 aa18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 REXO1Q8N1G1 1221 aaKnown RBP18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 LENG1Q96BZ8 264 aaPredicted RBP18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 PAWRQ96IZ0 340 aaKnown RBP18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 LLPHQ9BRT6 129 aaKnown RBP18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 C11orf49Q9H6J7 331 aa18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 MRVI1Q9Y6F6 885 aa18.33■□□□□ 0.52
PPFIA3-213ENST00000602905 SYNRGQ9UMZ2 1314 aa18.32■□□□□ 0.52
PPFIA3-213ENST00000602905 DYNC1LI2O43237 492 aaPredicted RBP18.32■□□□□ 0.52
PPFIA3-213ENST00000602905 ZEB2O60315 1214 aa18.32■□□□□ 0.52
PPFIA3-213ENST00000602905 CTDNEP1O95476 244 aa18.32■□□□□ 0.52
PPFIA3-213ENST00000602905 GJA9P57773 515 aa18.32■□□□□ 0.52
PPFIA3-213ENST00000602905 GALNT17Q6IS24 598 aa18.32■□□□□ 0.52
PPFIA3-213ENST00000602905 NLRX1Q86UT6 975 aa18.32■□□□□ 0.52
PPFIA3-213ENST00000602905 PCSK9Q8NBP7 692 aaKnown RBP18.32■□□□□ 0.52
PPFIA3-213ENST00000602905 NSUN7Q8NE18 718 aaKnown RBP18.32■□□□□ 0.52
PPFIA3-213ENST00000602905 IL31RAQ8NI17 732 aa18.32■□□□□ 0.52
PPFIA3-213ENST00000602905 HTATIP2Q9BUP3 242 aa18.32■□□□□ 0.52
PPFIA3-213ENST00000602905 ANO3Q9BYT9 981 aa18.32■□□□□ 0.52
PPFIA3-213ENST00000602905 GNEQ9Y223 722 aaKnown RBP18.32■□□□□ 0.52
PPFIA3-213ENST00000602905 TRIM29Q14134 588 aa18.31■□□□□ 0.52
PPFIA3-213ENST00000602905 GNASQ5JWF2 1037 aa18.31■□□□□ 0.52
PPFIA3-213ENST00000602905 JAKMIP3Q5VZ66 844 aa18.31■□□□□ 0.52
PPFIA3-213ENST00000602905 OR6J1Q8NGC5 347 aa18.31■□□□□ 0.52
PPFIA3-213ENST00000602905 TSEN34Q9BSV6 310 aaKnown RBP18.31■□□□□ 0.52
PPFIA3-213ENST00000602905 ALG1Q9BT22 464 aa18.31■□□□□ 0.52
PPFIA3-213ENST00000602905 UPF3AQ9H1J1 476 aaKnown RBP18.31■□□□□ 0.52
PPFIA3-213ENST00000602905 BRCA2P51587 3418 aa18.31■□□□□ 0.52
PPFIA3-213ENST00000602905 ADCY6O43306 1168 aa18.3■□□□□ 0.52
PPFIA3-213ENST00000602905 ADAMTS4O75173 837 aa18.3■□□□□ 0.52
PPFIA3-213ENST00000602905 TGFB3P10600 412 aa18.3■□□□□ 0.52
PPFIA3-213ENST00000602905 CLK2P49760 499 aaKnown RBP18.3■□□□□ 0.52
PPFIA3-213ENST00000602905 HMGN5P82970 282 aaKnown RBP18.3■□□□□ 0.52
PPFIA3-213ENST00000602905 DIS3LQ8TF46 1054 aaKnown RBP18.3■□□□□ 0.52
PPFIA3-213ENST00000602905 AIFM3Q96NN9 605 aa18.3■□□□□ 0.52
PPFIA3-213ENST00000602905 BRMS1Q9HCU9 246 aa18.3■□□□□ 0.52
PPFIA3-213ENST00000602905 TMEM260Q9NX78 707 aa18.3■□□□□ 0.52
PPFIA3-213ENST00000602905 RTEL1Q9NZ71 1219 aa18.3■□□□□ 0.52
PPFIA3-213ENST00000602905 PCDHA4Q9UN74 947 aa18.3■□□□□ 0.52
PPFIA3-213ENST00000602905 MOXD2PA6NHM9 499 aa18.29■□□□□ 0.52
PPFIA3-213ENST00000602905 GH1P01241 217 aa18.29■□□□□ 0.52
PPFIA3-213ENST00000602905 CST5P28325 142 aaPredicted RBP18.29■□□□□ 0.52
PPFIA3-213ENST00000602905 ZNF76P36508 570 aa18.29■□□□□ 0.52
PPFIA3-213ENST00000602905 CPT1AP50416 773 aa18.29■□□□□ 0.52
PPFIA3-213ENST00000602905 MRPS9P82933 396 aaKnown RBP18.29■□□□□ 0.52
PPFIA3-213ENST00000602905 FSCN1Q16658 493 aaKnown RBP18.29■□□□□ 0.52
PPFIA3-213ENST00000602905 BLIDQ8IZY5 108 aa18.29■□□□□ 0.52
PPFIA3-213ENST00000602905 FAM184AQ8NB25 1140 aa18.29■□□□□ 0.52
PPFIA3-213ENST00000602905 KLHDC9Q8NEP7 349 aa18.29■□□□□ 0.52
PPFIA3-213ENST00000602905 ZFP91Q96JP5 570 aaPredicted RBP18.29■□□□□ 0.52
PPFIA3-213ENST00000602905 CDHR1Q96JP9 859 aa18.29■□□□□ 0.52
PPFIA3-213ENST00000602905 PGBD1Q96JS3 809 aa18.29■□□□□ 0.52
PPFIA3-213ENST00000602905 SENP6Q9GZR1 1112 aaPredicted RBP18.29■□□□□ 0.52
PPFIA3-213ENST00000602905 FIBPO43427 364 aa18.28■□□□□ 0.52
PPFIA3-213ENST00000602905 JAK2O60674 1132 aa18.28■□□□□ 0.52
PPFIA3-213ENST00000602905 ARIH2O95376 493 aa18.28■□□□□ 0.52
PPFIA3-213ENST00000602905 SREBF1P36956 1147 aa18.28■□□□□ 0.52
PPFIA3-213ENST00000602905 MNX1P50219 401 aaPredicted RBP18.28■□□□□ 0.52
PPFIA3-213ENST00000602905 KCNA10Q16322 511 aa18.28■□□□□ 0.52
PPFIA3-213ENST00000602905 LY6KQ17RY6 165 aa18.28■□□□□ 0.52
PPFIA3-213ENST00000602905 CCDC62Q6P9F0 684 aa18.28■□□□□ 0.52
PPFIA3-213ENST00000602905 UBE2Q1Q7Z7E8 422 aa18.28■□□□□ 0.52
PPFIA3-213ENST00000602905 DAGLBQ8NCG7 672 aa18.28■□□□□ 0.52
PPFIA3-213ENST00000602905 TMX3Q96JJ7 454 aa18.28■□□□□ 0.52
PPFIA3-213ENST00000602905 INPP4AQ96PE3 977 aaPredicted RBP18.28■□□□□ 0.52
PPFIA3-213ENST00000602905 DDX41Q9UJV9 622 aaKnown RBP18.28■□□□□ 0.52
PPFIA3-213ENST00000602905 KIF3AQ9Y496 699 aa18.28■□□□□ 0.52
PPFIA3-213ENST00000602905 ICAM3P32942 547 aa18.27■□□□□ 0.52
PPFIA3-213ENST00000602905 NKX3-2P78367 333 aa18.27■□□□□ 0.52
PPFIA3-213ENST00000602905 ARHGAP4P98171 946 aa18.27■□□□□ 0.52
PPFIA3-213ENST00000602905 BEX3Q00994 111 aa18.27■□□□□ 0.52
PPFIA3-213ENST00000602905 ST3GAL1Q11201 340 aa18.27■□□□□ 0.52
PPFIA3-213ENST00000602905 LAMC2Q13753 1193 aa18.27■□□□□ 0.52
PPFIA3-213ENST00000602905 DHX37Q8IY37 1157 aaKnown RBP18.27■□□□□ 0.52
PPFIA3-213ENST00000602905 DPF3Q92784 378 aa18.27■□□□□ 0.52
PPFIA3-213ENST00000602905 COPS5Q92905 334 aa18.27■□□□□ 0.52
PPFIA3-213ENST00000602905 VTI1AQ96AJ9 217 aa18.27■□□□□ 0.52
PPFIA3-213ENST00000602905 GPRASP2Q96D09 838 aa18.27■□□□□ 0.52
PPFIA3-213ENST00000602905 PHF20Q9BVI0 1012 aa18.27■□□□□ 0.52
PPFIA3-213ENST00000602905 KCNJ14Q9UNX9 436 aa18.27■□□□□ 0.52
PPFIA3-213ENST00000602905 PHF24Q9UPV7 400 aa18.27■□□□□ 0.52
PPFIA3-213ENST00000602905 MAFGO15525 162 aa18.26■□□□□ 0.51
PPFIA3-213ENST00000602905 DTNBO60941 627 aa18.26■□□□□ 0.51
PPFIA3-213ENST00000602905 RGS20O76081 388 aa18.26■□□□□ 0.51
PPFIA3-213ENST00000602905 ASGR1P07306 291 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms