RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 TXKP42681 527 aa19.6■□□□□ 0.73
PPFIA3-207ENST00000602716 PABPC4Q13310 644 aaKnown RBP eCLIP19.6■□□□□ 0.73
PPFIA3-207ENST00000602716 RGMBQ6NW40 437 aa19.6■□□□□ 0.73
PPFIA3-207ENST00000602716 PDILTQ8N807 584 aa19.6■□□□□ 0.73
PPFIA3-207ENST00000602716 CYP39A1Q9NYL5 469 aa19.6■□□□□ 0.73
PPFIA3-207ENST00000602716 PNMA2Q9UL42 364 aa19.6■□□□□ 0.73
PPFIA3-207ENST00000602716 KCNH3Q9ULD8 1083 aa19.6■□□□□ 0.73
PPFIA3-207ENST00000602716 TLL2Q9Y6L7 1015 aa19.6■□□□□ 0.73
PPFIA3-207ENST00000602716 FRMPD4Q14CM0 1322 aa19.6■□□□□ 0.73
PPFIA3-207ENST00000602716 LCTP09848 1927 aa19.6■□□□□ 0.73
PPFIA3-207ENST00000602716 ZNF202O95125 648 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 CCDC192P0DO97 292 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 CIITAP33076 1130 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 SYKP43405 635 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 ORC2Q13416 577 aaPredicted RBP19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 DTHD1Q6ZMT9 781 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 ANKRD23Q86SG2 305 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 ETNPPLQ8TBG4 499 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 KCNMB3Q9NPA1 279 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 ASTN1O14525 1302 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 IGF2BP3O00425 579 aaKnown RBP eCLIP19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 LAD1O00515 517 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 SLC10A3P09131 477 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 TECP42680 631 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 TKFCQ3LXA3 575 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 MOXD1Q6UVY6 613 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 NCAPG2Q86XI2 1143 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 TEX2Q8IWB9 1127 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 CKAP2LQ8IYA6 745 aa19.59■□□□□ 0.73
PPFIA3-207ENST00000602716 POTEMA6NI47 508 aa19.58■□□□□ 0.73
PPFIA3-207ENST00000602716 FAM155AB1AL88 458 aaPredicted RBP19.58■□□□□ 0.73
PPFIA3-207ENST00000602716 KINO60870 393 aaKnown RBP19.58■□□□□ 0.73
PPFIA3-207ENST00000602716 ERCC3P19447 782 aa19.58■□□□□ 0.73
PPFIA3-207ENST00000602716 LRRC15Q8TF66 581 aa19.58■□□□□ 0.73
PPFIA3-207ENST00000602716 ZIC5Q96T25 663 aa19.58■□□□□ 0.73
PPFIA3-207ENST00000602716 FOXN1O15353 648 aa19.58■□□□□ 0.72
PPFIA3-207ENST00000602716 SMCR8Q8TEV9 937 aaPredicted RBP19.58■□□□□ 0.72
PPFIA3-207ENST00000602716 PORCNQ9H237 461 aa19.58■□□□□ 0.72
PPFIA3-207ENST00000602716 PXMP2Q9NR77 195 aa19.58■□□□□ 0.72
PPFIA3-207ENST00000602716 ABT1Q9ULW3 272 aaKnown RBP19.58■□□□□ 0.72
PPFIA3-207ENST00000602716 RABGAP1Q9Y3P9 1069 aa19.58■□□□□ 0.72
PPFIA3-207ENST00000602716 MSH4O15457 936 aa19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 POLR2DO15514 142 aaKnown RBP19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 AP5Z1O43299 807 aa19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 LONP1P36776 959 aaKnown RBP19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 MRPS9P82933 396 aaKnown RBP19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 PGM5Q15124 567 aa19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 LONRF3Q496Y0 759 aa19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 Q4G0T1 1027 aa19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 ANKRD13CQ8N6S4 541 aa19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 CHST13Q8NET6 341 aa19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 ZNF830Q96NB3 372 aaPredicted RBP19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 RMDN3Q96TC7 470 aa19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 PDCD2LQ9BRP1 358 aa19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 TNMDQ9H2S6 317 aa19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 FAM13BQ9NYF5 915 aa19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 PNMA3Q9UL41 463 aa19.57■□□□□ 0.72
PPFIA3-207ENST00000602716 A0A087WWV3 80 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 TOMM70O94826 608 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 ITGB5P18084 799 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 ZNF76P36508 570 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 ERVK-9P63128 1117 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 ERVK-24P63145 666 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 CNTN2Q02246 1040 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 KARSQ15046 597 aaKnown RBP19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 SASS6Q6UVJ0 657 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 GRAMD1CQ8IYS0 662 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 IGSF22Q8N9C0 903 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 ZNF784Q8NCA9 323 aaPredicted RBP19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 TTC12Q9H892 705 aaPredicted RBP19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 SERTAD1Q9UHV2 236 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 SLC45A1Q9Y2W3 748 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 UQCRHLA0A096LP55 91 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 TESPA1A2RU30 521 aaPredicted RBP19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 ACTN4O43707 911 aaKnown RBP19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 UQCRHP07919 91 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 FSTL1Q12841 308 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 DHX58Q96C10 678 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 NAP1L4Q99733 375 aaKnown RBP19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 MMTAG2Q9BU76 263 aaKnown RBP19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 EHMT1Q9H9B1 1298 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 EFCC1Q9HA90 598 aa19.56■□□□□ 0.72
PPFIA3-207ENST00000602716 ARP10275 920 aa19.55■□□□□ 0.72
PPFIA3-207ENST00000602716 FXR2P51116 673 aaKnown RBP eCLIP19.55■□□□□ 0.72
PPFIA3-207ENST00000602716 CEP55Q53EZ4 464 aa19.55■□□□□ 0.72
PPFIA3-207ENST00000602716 RBM43Q6ZSC3 357 aaKnown RBP19.55■□□□□ 0.72
PPFIA3-207ENST00000602716 TMEM88BA6NKF7 163 aa19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 GRM1Q13255 1194 aa19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 PLA2G4DQ86XP0 818 aa19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 ANKRD35Q8N283 1001 aa19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 SAMD3Q8N6K7 520 aa19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 FAM200AQ8TCP9 573 aa19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 PLIN2Q99541 437 aa19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 NUDT12Q9BQG2 462 aa19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 MAP3K20Q9NYL2 800 aaKnown RBP19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 MYCLP12524 364 aaPredicted RBP19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 TYRO3Q06418 890 aa19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 SPIRE1Q08AE8 756 aa19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 E2F4Q16254 413 aa19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 ARHGEF16Q5VV41 709 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms