RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 SLF2Q8IX21 1173 aa16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 BACH1O14867 736 aa16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 FMNL1O95466 1100 aaPredicted RBP16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 CCT6AP40227 531 aaKnown RBP16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 RWDD2BP57060 319 aa16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 SLC7A5Q01650 507 aa16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 ADCY2Q08462 1091 aa16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 RRP36Q96EU6 259 aaKnown RBP16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 PSMB7Q99436 277 aa16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 SERPINB13Q9UIV8 391 aa16.98■□□□□ 0.31
PPFIA3-206ENST00000602655 GOLGA8KD6RF30 607 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 PSMD14O00487 310 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 TSR1Q2NL82 804 aaKnown RBP16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 ODF2Q5BJF6 829 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 THEMIS2Q5TEJ8 643 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 EEF2KMTQ96G04 330 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 BIN2Q9UBW5 565 aaPredicted RBP16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 CENPFP49454 3210 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 MYH13Q9UKX3 1938 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 GPR75-ASB3A0A0A6YYF3 556 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 AGPSO00116 658 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 SHOX2O60902 331 aaPredicted RBP16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 HLA-DOAP06340 250 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 NAPAP54920 295 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 NAA35Q5VZE5 725 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 CAPRIN2Q6IMN6 1127 aaKnown RBP16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 RCSD1Q6JBY9 416 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 NOSTRINQ8IVI9 506 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 GJA10Q969M2 543 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 PIGSQ96S52 555 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 MARCH6O60337 910 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 C2orf54Q08AI8 447 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 NNTQ13423 1086 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 USH1GQ495M9 461 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 DLK2Q6UY11 383 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 TPX2Q9ULW0 747 aaKnown RBP16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 TFR2Q9UP52 801 aa16.97■□□□□ 0.31
PPFIA3-206ENST00000602655 YDJCA8MPS7 323 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 CMA1P23946 247 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 POLD1P28340 1107 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 SLC8A1P32418 973 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 HDLBPQ00341 1268 aaKnown RBP16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 PPP1R7Q15435 360 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 CCDC26Q8TAB7 109 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 CSRNP1Q96S65 589 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 VCPKMTQ9H867 229 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 KRT14P02533 472 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 CLTAP09496 248 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 APBA1Q02410 837 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 RASSF7Q02833 373 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 SEPT2Q15019 361 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 INF2Q27J81 1249 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 APOBEC3HQ6NTF7 200 aaKnown RBP16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 CCDC50Q8IVM0 306 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 LMBR1Q8WVP7 490 aa16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 PAIP2Q9BPZ3 127 aaKnown RBP16.96■□□□□ 0.31
PPFIA3-206ENST00000602655 MRPL12P52815 198 aaKnown RBP16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 TBC1D10BQ4KMP7 808 aaPredicted RBP16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 CCDC122Q5T0U0 273 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 HIBCHQ6NVY1 386 aaPredicted RBP16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 SPATS2Q86XZ4 545 aaKnown RBP16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 ZNF473Q8WTR7 871 aaKnown RBP16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 TCP11Q8WWU5 503 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 JDP2Q8WYK2 163 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 TUBGCP6Q96RT7 1819 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 LETM2Q2VYF4 491 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 C11orf91Q3C1V1 193 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 MAATS1Q7Z4T9 603 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 NSMCE1Q8WV22 266 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 CCT8L2Q96SF2 557 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 MAPK8IP1Q9UQF2 711 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 SALL1Q9NSC2 1324 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 BRWD3Q6RI45 1802 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 OPLAHO14841 1288 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 POLR2DO15514 142 aaKnown RBP16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 SNUPNO95149 360 aaKnown RBP16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 PARP1P09874 1014 aaKnown RBP16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 LSP1P33241 339 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 GNPTABQ3T906 1256 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 ACCSLQ4AC99 568 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 CCNI2Q6ZMN8 369 aaPredicted RBP16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 SAMD7Q7Z3H4 446 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 RPUSD2Q8IZ73 545 aaKnown RBP16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 EPSTI1Q96J88 318 aa16.95■□□□□ 0.3
PPFIA3-206ENST00000602655 TNRC6CQ9HCJ0 1690 aaKnown RBP16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 ZNF185O15231 689 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 MMP1P03956 469 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 PLCG2P16885 1265 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 DNA2P51530 1060 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 FMR1Q06787 632 aaKnown RBP eCLIP16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 DLGAP5Q15398 846 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 NBPF9Q3BBW0 867 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 PODNQ7Z5L7 613 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 WASF1Q92558 559 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 SHISA4Q96DD7 197 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 TMEM39BQ9GZU3 492 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 KIF5BP33176 963 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 TYW1BQ6NUM6 668 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 IFT81Q8WYA0 676 aa16.94■□□□□ 0.3
PPFIA3-206ENST00000602655 DDX60Q8IY21 1712 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms