RNA–Protein interactions for RNA: ENST00000602165.1

GTPBP3-228, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-228ENST00000602165 SMARCA1P28370 1054 aa21.14■□□□□ 0.97
GTPBP3-228ENST00000602165 CYP2C18P33260 490 aa21.14■□□□□ 0.97
GTPBP3-228ENST00000602165 SGMS1Q86VZ5 419 aa21.14■□□□□ 0.97
GTPBP3-228ENST00000602165 DEFB123Q8N688 67 aa21.14■□□□□ 0.97
GTPBP3-228ENST00000602165 ZFP91Q96JP5 570 aaPredicted RBP21.14■□□□□ 0.97
GTPBP3-228ENST00000602165 SEZ6LQ9BYH1 1024 aa21.14■□□□□ 0.97
GTPBP3-228ENST00000602165 ALDH8A1Q9H2A2 487 aaPredicted RBP21.14■□□□□ 0.97
GTPBP3-228ENST00000602165 DDX41Q9UJV9 622 aaKnown RBP21.14■□□□□ 0.97
GTPBP3-228ENST00000602165 MRVI1Q9Y6F6 885 aa21.14■□□□□ 0.97
GTPBP3-228ENST00000602165 UMODL1Q5DID0 1318 aa21.13■□□□□ 0.97
GTPBP3-228ENST00000602165 RGS20O76081 388 aa21.13■□□□□ 0.97
GTPBP3-228ENST00000602165 MMP3P08254 477 aa21.13■□□□□ 0.97
GTPBP3-228ENST00000602165 CSF2RAP15509 400 aa21.13■□□□□ 0.97
GTPBP3-228ENST00000602165 EXOSC10Q01780 885 aaKnown RBP21.13■□□□□ 0.97
GTPBP3-228ENST00000602165 NBPF20Q3BBV1 942 aa21.13■□□□□ 0.97
GTPBP3-228ENST00000602165 TSGA10IPQ3SY00 556 aa21.13■□□□□ 0.97
GTPBP3-228ENST00000602165 DHX32Q7L7V1 743 aaKnown RBP21.13■□□□□ 0.97
GTPBP3-228ENST00000602165 CCDC82Q8N4S0 544 aa21.13■□□□□ 0.97
GTPBP3-228ENST00000602165 FANCBQ8NB91 859 aa21.13■□□□□ 0.97
GTPBP3-228ENST00000602165 RNPC3Q96LT9 517 aaKnown RBP21.13■□□□□ 0.97
GTPBP3-228ENST00000602165 HIPK3Q9H422 1215 aa21.13■□□□□ 0.97
GTPBP3-228ENST00000602165 TRMT13Q9NUP7 481 aaKnown RBP21.13■□□□□ 0.97
GTPBP3-228ENST00000602165 hCG_1642624A0A1W2PR95 340 aa21.12■□□□□ 0.97
GTPBP3-228ENST00000602165 KPNA6O60684 536 aa21.12■□□□□ 0.97
GTPBP3-228ENST00000602165 CCND2P30279 289 aa21.12■□□□□ 0.97
GTPBP3-228ENST00000602165 CHMP4BP1P59074 171 aa21.12■□□□□ 0.97
GTPBP3-228ENST00000602165 KRT32Q14532 448 aa21.12■□□□□ 0.97
GTPBP3-228ENST00000602165 FAM47CQ5HY64 1035 aa21.12■□□□□ 0.97
GTPBP3-228ENST00000602165 APOA5Q6Q788 366 aa21.12■□□□□ 0.97
GTPBP3-228ENST00000602165 TMTC3Q6ZXV5 915 aa21.12■□□□□ 0.97
GTPBP3-228ENST00000602165 VSIG10LQ86VR7 867 aa21.12■□□□□ 0.97
GTPBP3-228ENST00000602165 TMEM199Q8N511 208 aa21.12■□□□□ 0.97
GTPBP3-228ENST00000602165 SCN5AQ14524 2016 aa21.12■□□□□ 0.97
GTPBP3-228ENST00000602165 TRIP12Q14669 1992 aaPredicted RBP21.11■□□□□ 0.97
GTPBP3-228ENST00000602165 SORBS3O60504 671 aa21.11■□□□□ 0.97
GTPBP3-228ENST00000602165 PPIGQ13427 754 aaKnown RBP eCLIP21.11■□□□□ 0.975e-7■■□□□ 12.5
GTPBP3-228ENST00000602165 USP17L6PQ6QN14 398 aa21.11■□□□□ 0.97
GTPBP3-228ENST00000602165 SYNE3Q6ZMZ3 975 aa21.11■□□□□ 0.97
GTPBP3-228ENST00000602165 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.11■□□□□ 0.976e-10■■■■□ 22.8
GTPBP3-228ENST00000602165 NOC4LQ9BVI4 516 aaKnown RBP21.11■□□□□ 0.97
GTPBP3-228ENST00000602165 BRPF3Q9ULD4 1205 aa21.11■□□□□ 0.97
GTPBP3-228ENST00000602165 FRMPD4Q14CM0 1322 aa21.1■□□□□ 0.97
GTPBP3-228ENST00000602165 TANC1Q9C0D5 1861 aa21.1■□□□□ 0.97
GTPBP3-228ENST00000602165 ACRP10323 421 aa21.1■□□□□ 0.97
GTPBP3-228ENST00000602165 CPA1P15085 419 aa21.1■□□□□ 0.97
GTPBP3-228ENST00000602165 C16orf59Q7L2K0 433 aa21.1■□□□□ 0.97
GTPBP3-228ENST00000602165 SMARCC2Q8TAQ2 1214 aa21.1■□□□□ 0.97
GTPBP3-228ENST00000602165 GPKOWQ92917 476 aaPredicted RBP eCLIP21.1■□□□□ 0.97
GTPBP3-228ENST00000602165 CYP2C9P11712 490 aa21.09■□□□□ 0.97
GTPBP3-228ENST00000602165 CCL23P55773 120 aa21.09■□□□□ 0.97
GTPBP3-228ENST00000602165 NFRKBQ6P4R8 1299 aa21.09■□□□□ 0.97
GTPBP3-228ENST00000602165 DHX37Q8IY37 1157 aaKnown RBP21.09■□□□□ 0.97
GTPBP3-228ENST00000602165 CUL5Q93034 780 aa21.09■□□□□ 0.97
GTPBP3-228ENST00000602165 EMID1Q96A84 441 aaPredicted RBP21.09■□□□□ 0.97
GTPBP3-228ENST00000602165 CNTNAP5Q8WYK1 1306 aa21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 MEIS2O14770 477 aa21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 ZBTB43O43298 467 aa21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 HSPA4P34932 840 aa21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 MRPS9P82933 396 aaKnown RBP21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 SP2Q02086 613 aa21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 LAMC2Q13753 1193 aa21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 DGKDQ16760 1214 aa21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 TMEM240Q5SV17 173 aa21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 KCNV1Q6PIU1 500 aa21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 GBF1Q92538 1859 aa21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 KCNB2Q92953 911 aa21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 WNT8AQ9H1J5 351 aa21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 MTMR10Q9NXD2 777 aa21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 SNX14Q9Y5W7 946 aa21.08■□□□□ 0.97
GTPBP3-228ENST00000602165 COL6A3P12111 3177 aa21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 KLF18A0A0U1RQI7 1052 aa21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 PIK3CDO00329 1044 aa21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 GGPS1O95749 300 aa21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 HMGB1P09429 215 aaKnown RBP21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 SUPT20HL2P0C7V6 817 aa21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 CASTP20810 708 aaKnown RBP21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 UBA1P22314 1058 aaKnown RBP21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 SMAD3P84022 425 aaKnown RBP21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 RTN1Q16799 776 aa21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 MYSM1Q5VVJ2 828 aa21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 ZNF365Q70YC5 407 aa21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 PPTC7Q8NI37 304 aa21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 KAT2BQ92831 832 aa21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 FAM161BQ96MY7 647 aa21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 JAKMIP1Q96N16 626 aaKnown RBP21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 IL23AQ9NPF7 189 aa21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 RBM28Q9NW13 759 aaKnown RBP21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 RTEL1Q9NZ71 1219 aa21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 NAP1L2Q9ULW6 460 aaPredicted RBP21.07■□□□□ 0.96
GTPBP3-228ENST00000602165 GOLGA8AA7E2F4 631 aa21.06■□□□□ 0.96
GTPBP3-228ENST00000602165 GOLGA8BA8MQT2 603 aa21.06■□□□□ 0.96
GTPBP3-228ENST00000602165 REC8O95072 547 aa21.06■□□□□ 0.96
GTPBP3-228ENST00000602165 ZNF286BP0CG31 522 aa21.06■□□□□ 0.96
GTPBP3-228ENST00000602165 FGD1P98174 961 aa21.06■□□□□ 0.96
GTPBP3-228ENST00000602165 PTPN11Q06124 597 aaPredicted RBP21.06■□□□□ 0.96
GTPBP3-228ENST00000602165 CELF3Q5SZQ8 465 aaKnown RBP21.06■□□□□ 0.96
GTPBP3-228ENST00000602165 PSRC1Q6PGN9 363 aaPredicted RBP21.06■□□□□ 0.96
GTPBP3-228ENST00000602165 HEATR3Q7Z4Q2 680 aa21.06■□□□□ 0.96
GTPBP3-228ENST00000602165 SCLYQ96I15 445 aa21.06■□□□□ 0.96
GTPBP3-228ENST00000602165 PSTPIP2Q9H939 334 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms