RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 CCND2P30279 289 aa19.24■□□□□ 0.67
SSBP4-213ENST00000602088 NAPAP54920 295 aa19.24■□□□□ 0.67
SSBP4-213ENST00000602088 CCT2P78371 535 aaKnown RBP19.24■□□□□ 0.67
SSBP4-213ENST00000602088 PFKFB3Q16875 520 aaPredicted RBP19.24■□□□□ 0.67
SSBP4-213ENST00000602088 LY6KQ17RY6 165 aa19.24■□□□□ 0.67
SSBP4-213ENST00000602088 PPP1R18Q6NYC8 613 aa19.24■□□□□ 0.67
SSBP4-213ENST00000602088 COPS5Q92905 334 aa19.24■□□□□ 0.67
SSBP4-213ENST00000602088 ZMYND8Q9ULU4 1186 aaPredicted RBP19.24■□□□□ 0.67
SSBP4-213ENST00000602088 RANBP2P49792 3224 aaKnown RBP19.23■□□□□ 0.67
SSBP4-213ENST00000602088 ZEB2O60315 1214 aa19.23■□□□□ 0.67
SSBP4-213ENST00000602088 CPT1AP50416 773 aa19.23■□□□□ 0.67
SSBP4-213ENST00000602088 MRPS9P82933 396 aaKnown RBP19.23■□□□□ 0.67
SSBP4-213ENST00000602088 PKN1Q16512 942 aa19.23■□□□□ 0.67
SSBP4-213ENST00000602088 TRIM60Q495X7 471 aa19.23■□□□□ 0.67
SSBP4-213ENST00000602088 CXCL17Q6UXB2 119 aa19.23■□□□□ 0.67
SSBP4-213ENST00000602088 TEX2Q8IWB9 1127 aa19.23■□□□□ 0.67
SSBP4-213ENST00000602088 OR6J1Q8NGC5 347 aa19.23■□□□□ 0.67
SSBP4-213ENST00000602088 PHKBQ93100 1093 aa19.23■□□□□ 0.67
SSBP4-213ENST00000602088 RBM27Q9P2N5 1060 aaKnown RBP19.23■□□□□ 0.67
SSBP4-213ENST00000602088 DDX41Q9UJV9 622 aaKnown RBP19.23■□□□□ 0.67
SSBP4-213ENST00000602088 A6NJR5 290 aa19.22■□□□□ 0.67
SSBP4-213ENST00000602088 STAM2O75886 525 aa19.22■□□□□ 0.67
SSBP4-213ENST00000602088 CABYRO75952 493 aa19.22■□□□□ 0.67
SSBP4-213ENST00000602088 SCG2P13521 617 aa19.22■□□□□ 0.67
SSBP4-213ENST00000602088 SYN1P17600 705 aa19.22■□□□□ 0.67
SSBP4-213ENST00000602088 TLE2Q04725 743 aa19.22■□□□□ 0.67
SSBP4-213ENST00000602088 UBE2SQ16763 222 aa19.22■□□□□ 0.67
SSBP4-213ENST00000602088 KCNV1Q6PIU1 500 aa19.22■□□□□ 0.67
SSBP4-213ENST00000602088 VTI1AQ96AJ9 217 aa19.22■□□□□ 0.67
SSBP4-213ENST00000602088 ZFP91Q96JP5 570 aaPredicted RBP19.22■□□□□ 0.67
SSBP4-213ENST00000602088 RNF26Q9BY78 433 aaPredicted RBP19.22■□□□□ 0.67
SSBP4-213ENST00000602088 RIC8AQ9NPQ8 531 aa19.22■□□□□ 0.67
SSBP4-213ENST00000602088 MRVI1Q9Y6F6 885 aa19.22■□□□□ 0.67
SSBP4-213ENST00000602088 A0A0U1RQG5 324 aaPredicted RBP19.21■□□□□ 0.67
SSBP4-213ENST00000602088 SMCO2A6NFE2 343 aa19.21■□□□□ 0.67
SSBP4-213ENST00000602088 GH1P01241 217 aa19.21■□□□□ 0.67
SSBP4-213ENST00000602088 CDK7P50613 346 aa19.21■□□□□ 0.67
SSBP4-213ENST00000602088 ARHGAP1Q07960 439 aa19.21■□□□□ 0.67
SSBP4-213ENST00000602088 STK3Q13188 491 aa19.21■□□□□ 0.67
SSBP4-213ENST00000602088 PCNX4Q63HM2 1172 aa19.21■□□□□ 0.67
SSBP4-213ENST00000602088 XRRA1Q6P2D8 792 aa19.21■□□□□ 0.67
SSBP4-213ENST00000602088 INPP4AQ96PE3 977 aaPredicted RBP19.21■□□□□ 0.67
SSBP4-213ENST00000602088 POLR3EQ9NVU0 708 aa19.21■□□□□ 0.67
SSBP4-213ENST00000602088 PCDHA6Q9UN73 950 aa19.21■□□□□ 0.67
SSBP4-213ENST00000602088 PCDHA8Q9Y5H6 950 aa19.21■□□□□ 0.67
SSBP4-213ENST00000602088 SPDYE3A6NKU9 549 aa19.2■□□□□ 0.66
SSBP4-213ENST00000602088 ARVCFO00192 962 aa19.2■□□□□ 0.66
SSBP4-213ENST00000602088 PPFIA3O75145 1194 aa19.2■□□□□ 0.66
SSBP4-213ENST00000602088 TGFB3P10600 412 aa19.2■□□□□ 0.66
SSBP4-213ENST00000602088 AK2P54819 239 aa19.2■□□□□ 0.66
SSBP4-213ENST00000602088 PURAQ00577 322 aaKnown RBP19.2■□□□□ 0.66
SSBP4-213ENST00000602088 AKAP17AQ02040 695 aaKnown RBP19.2■□□□□ 0.66
SSBP4-213ENST00000602088 ANKRD1Q15327 319 aa19.2■□□□□ 0.66
SSBP4-213ENST00000602088 BRDTQ58F21 947 aaPredicted RBP19.2■□□□□ 0.66
SSBP4-213ENST00000602088 ANKRD33Q7Z3H0 272 aa19.2■□□□□ 0.66
SSBP4-213ENST00000602088 SLC43A3Q8NBI5 491 aa19.2■□□□□ 0.66
SSBP4-213ENST00000602088 TOX2Q96NM4 488 aa19.2■□□□□ 0.66
SSBP4-213ENST00000602088 SLC26A6Q9BXS9 759 aa19.2■□□□□ 0.66
SSBP4-213ENST00000602088 GLT8D2Q9H1C3 349 aa19.2■□□□□ 0.66
SSBP4-213ENST00000602088 TPCN1Q9ULQ1 816 aa19.2■□□□□ 0.66
SSBP4-213ENST00000602088 ADCY7P51828 1080 aa19.19■□□□□ 0.66
SSBP4-213ENST00000602088 NEK4P51957 841 aa19.19■□□□□ 0.66
SSBP4-213ENST00000602088 SP2Q02086 613 aa19.19■□□□□ 0.66
SSBP4-213ENST00000602088 CHRDL2Q6WN34 429 aa19.19■□□□□ 0.66
SSBP4-213ENST00000602088 EMID1Q96A84 441 aaPredicted RBP19.19■□□□□ 0.66
SSBP4-213ENST00000602088 GDF15Q99988 308 aa19.19■□□□□ 0.66
SSBP4-213ENST00000602088 PRO3102Q9H379 93 aa19.19■□□□□ 0.66
SSBP4-213ENST00000602088 PDLIM7Q9NR12 457 aa19.19■□□□□ 0.66
SSBP4-213ENST00000602088 RTEL1Q9NZ71 1219 aa19.19■□□□□ 0.66
SSBP4-213ENST00000602088 COLQQ9Y215 455 aaPredicted RBP19.19■□□□□ 0.66
SSBP4-213ENST00000602088 GRIN2DO15399 1336 aa19.19■□□□□ 0.66
SSBP4-213ENST00000602088 ESYT2A0FGR8 921 aa19.18■□□□□ 0.66
SSBP4-213ENST00000602088 CPLX1O14810 134 aa19.18■□□□□ 0.66
SSBP4-213ENST00000602088 KPNA6O60684 536 aa19.18■□□□□ 0.66
SSBP4-213ENST00000602088 PQBP1O60828 265 aaKnown RBP19.18■□□□□ 0.66
SSBP4-213ENST00000602088 FOSP01100 380 aaPredicted RBP19.18■□□□□ 0.66
SSBP4-213ENST00000602088 MYL3P08590 195 aa19.18■□□□□ 0.66
SSBP4-213ENST00000602088 ICAM3P32942 547 aa19.18■□□□□ 0.66
SSBP4-213ENST00000602088 ITGA7Q13683 1181 aa19.18■□□□□ 0.66
SSBP4-213ENST00000602088 LAMC2Q13753 1193 aa19.18■□□□□ 0.66
SSBP4-213ENST00000602088 GNPTABQ3T906 1256 aa19.18■□□□□ 0.66
SSBP4-213ENST00000602088 DHX37Q8IY37 1157 aaKnown RBP19.18■□□□□ 0.66
SSBP4-213ENST00000602088 CCDC12Q8WUD4 166 aaPredicted RBP19.18■□□□□ 0.66
SSBP4-213ENST00000602088 AFG1LQ8WV93 481 aa19.18■□□□□ 0.66
SSBP4-213ENST00000602088 ZMYND12Q9H0C1 365 aa19.18■□□□□ 0.66
SSBP4-213ENST00000602088 PRKAG2Q9UGJ0 569 aa19.18■□□□□ 0.66
SSBP4-213ENST00000602088 DCDC2CA8MYV0 355 aa19.17■□□□□ 0.66
SSBP4-213ENST00000602088 SPATA31C2B4DYI2 1134 aa19.17■□□□□ 0.66
SSBP4-213ENST00000602088 PFKFB2O60825 505 aa19.17■□□□□ 0.66
SSBP4-213ENST00000602088 CLTBP09497 229 aa19.17■□□□□ 0.66
SSBP4-213ENST00000602088 MAGEA10P43363 369 aaPredicted RBP19.17■□□□□ 0.66
SSBP4-213ENST00000602088 CLK2P49760 499 aaKnown RBP19.17■□□□□ 0.66
SSBP4-213ENST00000602088 SSRP1Q08945 709 aaKnown RBP19.17■□□□□ 0.66
SSBP4-213ENST00000602088 FAAP100Q0VG06 881 aa19.17■□□□□ 0.66
SSBP4-213ENST00000602088 CELF3Q5SZQ8 465 aaKnown RBP19.17■□□□□ 0.66
SSBP4-213ENST00000602088 MYSM1Q5VVJ2 828 aa19.17■□□□□ 0.66
SSBP4-213ENST00000602088 CPLX2Q6PUV4 134 aaKnown RBP19.17■□□□□ 0.66
SSBP4-213ENST00000602088 SH3RF1Q7Z6J0 888 aa19.17■□□□□ 0.66
SSBP4-213ENST00000602088 TRIM22Q8IYM9 498 aa19.17■□□□□ 0.66
SSBP4-213ENST00000602088 MTG1Q9BT17 334 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms