RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 SLC28A3Q9HAS3 691 aa16.6■□□□□ 0.25
NEAT1-203ENST00000601801 TRMT13Q9NUP7 481 aaKnown RBP16.6■□□□□ 0.25
NEAT1-203ENST00000601801 CXXC1Q9P0U4 656 aaPredicted RBP16.6■□□□□ 0.25
NEAT1-203ENST00000601801 COL20A1Q9P218 1284 aa16.6■□□□□ 0.25
NEAT1-203ENST00000601801 ARIH2O95376 493 aa16.59■□□□□ 0.25
NEAT1-203ENST00000601801 CFBP00751 764 aa16.59■□□□□ 0.25
NEAT1-203ENST00000601801 PTH1RQ03431 593 aa16.59■□□□□ 0.25
NEAT1-203ENST00000601801 NBPF20Q3BBV1 942 aa16.59■□□□□ 0.25
NEAT1-203ENST00000601801 CCDC62Q6P9F0 684 aa16.59■□□□□ 0.25
NEAT1-203ENST00000601801 SEPT14Q6ZU15 432 aa16.59■□□□□ 0.25
NEAT1-203ENST00000601801 RALYLQ86SE5 291 aaKnown RBP16.59■□□□□ 0.25
NEAT1-203ENST00000601801 TBC1D32Q96NH3 1257 aa16.59■□□□□ 0.25
NEAT1-203ENST00000601801 WNT8AQ9H1J5 351 aa16.59■□□□□ 0.25
NEAT1-203ENST00000601801 TSPYL2Q9H2G4 693 aaPredicted RBP16.59■□□□□ 0.25
NEAT1-203ENST00000601801 MAD2L2Q9UI95 211 aa16.59■□□□□ 0.25
NEAT1-203ENST00000601801 YBX2Q9Y2T7 364 aaKnown RBP16.59■□□□□ 0.25
NEAT1-203ENST00000601801 KIAA1217Q5T5P2 1943 aa16.58■□□□□ 0.25
NEAT1-203ENST00000601801 SCN10AQ9Y5Y9 1956 aa16.58■□□□□ 0.25
NEAT1-203ENST00000601801 PALM3A6NDB9 673 aaPredicted RBP16.58■□□□□ 0.24
NEAT1-203ENST00000601801 IFIT3O14879 490 aaKnown RBP16.58■□□□□ 0.24
NEAT1-203ENST00000601801 ZBTB5O15062 677 aa16.58■□□□□ 0.24
NEAT1-203ENST00000601801 GH1P01241 217 aa16.58■□□□□ 0.24
NEAT1-203ENST00000601801 CYP2C9P11712 490 aa16.58■□□□□ 0.24
NEAT1-203ENST00000601801 BMP1P13497 986 aa16.58■□□□□ 0.24
NEAT1-203ENST00000601801 HOXD11P31277 338 aaPredicted RBP16.58■□□□□ 0.24
NEAT1-203ENST00000601801 SART3Q15020 963 aaKnown RBP16.58■□□□□ 0.24
NEAT1-203ENST00000601801 NFRKBQ6P4R8 1299 aa16.58■□□□□ 0.24
NEAT1-203ENST00000601801 OTOP2Q7RTS6 562 aa16.58■□□□□ 0.24
NEAT1-203ENST00000601801 NCOA7Q8NI08 942 aa16.58■□□□□ 0.24
NEAT1-203ENST00000601801 C1QTNF1Q9BXJ1 281 aa16.58■□□□□ 0.24
NEAT1-203ENST00000601801 PCDHA1Q9Y5I3 950 aa16.58■□□□□ 0.24
NEAT1-203ENST00000601801 SGSM2O43147 1006 aa16.57■□□□□ 0.24
NEAT1-203ENST00000601801 EIF3JO75822 258 aaKnown RBP16.57■□□□□ 0.24
NEAT1-203ENST00000601801 EIF2AK2P19525 551 aaKnown RBP16.57■□□□□ 0.24
NEAT1-203ENST00000601801 PTPN11Q06124 597 aaPredicted RBP16.57■□□□□ 0.24
NEAT1-203ENST00000601801 TRAF1Q13077 416 aa16.57■□□□□ 0.24
NEAT1-203ENST00000601801 LY6KQ17RY6 165 aa16.57■□□□□ 0.24
NEAT1-203ENST00000601801 MTMR8Q96EF0 704 aa16.57■□□□□ 0.24
NEAT1-203ENST00000601801 SCLYQ96I15 445 aa16.57■□□□□ 0.24
NEAT1-203ENST00000601801 NECAB3Q96P71 396 aaPredicted RBP16.57■□□□□ 0.24
NEAT1-203ENST00000601801 PXMP2Q9NR77 195 aa16.57■□□□□ 0.24
NEAT1-203ENST00000601801 MAP3K20Q9NYL2 800 aaKnown RBP16.57■□□□□ 0.24
NEAT1-203ENST00000601801 XIRP2A4UGR9 3374 aa16.57■□□□□ 0.24
NEAT1-203ENST00000601801 E7EWF7 191 aa16.56■□□□□ 0.24
NEAT1-203ENST00000601801 NR3C2P08235 984 aa16.56■□□□□ 0.24
NEAT1-203ENST00000601801 PFKMP08237 780 aa16.56■□□□□ 0.24
NEAT1-203ENST00000601801 MMP3P08254 477 aa16.56■□□□□ 0.24
NEAT1-203ENST00000601801 HSD17B4P51659 736 aa16.56■□□□□ 0.24
NEAT1-203ENST00000601801 CHMP4BP1P59074 171 aa16.56■□□□□ 0.24
NEAT1-203ENST00000601801 GRM4Q14833 912 aa16.56■□□□□ 0.24
NEAT1-203ENST00000601801 WTAPQ15007 396 aa16.56■□□□□ 0.24
NEAT1-203ENST00000601801 CHST3Q7LGC8 479 aa16.56■□□□□ 0.24
NEAT1-203ENST00000601801 HOMER1Q86YM7 354 aa16.56■□□□□ 0.24
NEAT1-203ENST00000601801 SAMD3Q8N6K7 520 aa16.56■□□□□ 0.24
NEAT1-203ENST00000601801 AFG1LQ8WV93 481 aa16.56■□□□□ 0.24
NEAT1-203ENST00000601801 NOD1Q9Y239 953 aa16.56■□□□□ 0.24
NEAT1-203ENST00000601801 TRANK1O15050 2925 aa16.56■□□□□ 0.24
NEAT1-203ENST00000601801 OPLAHO14841 1288 aa16.55■□□□□ 0.24
NEAT1-203ENST00000601801 PPP1R11O60927 126 aaPredicted RBP16.55■□□□□ 0.24
NEAT1-203ENST00000601801 CASTP20810 708 aaKnown RBP16.55■□□□□ 0.24
NEAT1-203ENST00000601801 GHRHRQ02643 423 aa16.55■□□□□ 0.24
NEAT1-203ENST00000601801 ARHGAP1Q07960 439 aa16.55■□□□□ 0.24
NEAT1-203ENST00000601801 RETREG2Q8NC44 543 aa16.55■□□□□ 0.24
NEAT1-203ENST00000601801 PPP1R13LQ8WUF5 828 aa16.55■□□□□ 0.24
NEAT1-203ENST00000601801 RIOX1Q9H6W3 641 aa16.55■□□□□ 0.24
NEAT1-203ENST00000601801 DDX41Q9UJV9 622 aaKnown RBP16.55■□□□□ 0.24
NEAT1-203ENST00000601801 MRVI1Q9Y6F6 885 aa16.55■□□□□ 0.24
NEAT1-203ENST00000601801 SLC4A7Q9Y6M7 1214 aa16.55■□□□□ 0.24
NEAT1-203ENST00000601801 ZBBXA8MT70 800 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 PITPNM1O00562 1244 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 RFC2P35250 354 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 RABGGTBP53611 331 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 TFF2Q03403 129 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 DGKDQ16760 1214 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 AAK1Q2M2I8 961 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 TMEM67Q5HYA8 995 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 PPP2R2DQ66LE6 453 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 STOX1Q6ZVD7 989 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 DEFB128Q7Z7B8 93 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 CATIPQ7Z7H3 387 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 MAP4K1Q92918 833 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 PIGSQ96S52 555 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 ARIH1Q9Y4X5 557 aaPredicted RBP16.54■□□□□ 0.24
NEAT1-203ENST00000601801 PCDHA11Q9Y5I1 949 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 TAF6LQ9Y6J9 622 aa16.54■□□□□ 0.24
NEAT1-203ENST00000601801 PNMA6FA0A0J9YX94 578 aa16.53■□□□□ 0.24
NEAT1-203ENST00000601801 MYCLP12524 364 aaPredicted RBP16.53■□□□□ 0.24
NEAT1-203ENST00000601801 ACTN1P12814 892 aa16.53■□□□□ 0.24
NEAT1-203ENST00000601801 HOXA13P31271 388 aaPredicted RBP16.53■□□□□ 0.24
NEAT1-203ENST00000601801 TROAPQ12815 778 aa16.53■□□□□ 0.24
NEAT1-203ENST00000601801 BFSP2Q13515 415 aa16.53■□□□□ 0.24
NEAT1-203ENST00000601801 LAMC2Q13753 1193 aa16.53■□□□□ 0.24
NEAT1-203ENST00000601801 PTGISQ16647 500 aa16.53■□□□□ 0.24
NEAT1-203ENST00000601801 KCNV1Q6PIU1 500 aa16.53■□□□□ 0.24
NEAT1-203ENST00000601801 CASC1Q6TDU7 716 aa16.53■□□□□ 0.24
NEAT1-203ENST00000601801 DHX37Q8IY37 1157 aaKnown RBP16.53■□□□□ 0.24
NEAT1-203ENST00000601801 MICALL1Q8N3F8 863 aa16.53■□□□□ 0.24
NEAT1-203ENST00000601801 EMID1Q96A84 441 aaPredicted RBP16.53■□□□□ 0.24
NEAT1-203ENST00000601801 PDCD2LQ9BRP1 358 aa16.53■□□□□ 0.24
NEAT1-203ENST00000601801 C22orf23Q9BZE7 217 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms