RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685		H0YHG0	523 aa		18.35	■□□□□ 0.53
CAPN12-211	ENST00000601685	DDR1	Q08345	913 aa		18.35	■□□□□ 0.53
CAPN12-211	ENST00000601685	PDXDC1	Q6P996	788 aa		18.35	■□□□□ 0.53
CAPN12-211	ENST00000601685	IFT81	Q8WYA0	676 aa		18.35	■□□□□ 0.53
CAPN12-211	ENST00000601685	ACSBG1	Q96GR2	724 aa		18.35	■□□□□ 0.53
CAPN12-211	ENST00000601685	PHLPP1	O60346	1717 aa		18.35	■□□□□ 0.53
CAPN12-211	ENST00000601685	MYH1	P12882	1939 aa		18.35	■□□□□ 0.53
CAPN12-211	ENST00000601685	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	18.35	■□□□□ 0.53
CAPN12-211	ENST00000601685	OR52Z1	P0C646	297 aa		18.35	■□□□□ 0.53
CAPN12-211	ENST00000601685	SLC1A4	P43007	532 aa		18.35	■□□□□ 0.53
CAPN12-211	ENST00000601685	SLC39A2	Q9NP94	309 aa		18.35	■□□□□ 0.53
CAPN12-211	ENST00000601685	ESYT3	A0FGR9	886 aa		18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	RBAK-RBAKDN	I3L0D1	243 aa		18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	CYP2D6	P10635	497 aa		18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	SET	Q01105	290 aa	Predicted RBP	18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	GPIHBP1	Q8IV16	184 aa		18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	ATP6V1G3	Q96LB4	118 aa		18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	EDEM3	Q9BZQ6	932 aa		18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	A1CF	Q9NQ94	594 aa	Known RBP	18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	DOT1L	Q8TEK3	1739 aa		18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	MDH1	P40925	334 aa	Known RBP	18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	ITPK1	Q13572	414 aa		18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	HGSNAT	Q68CP4	663 aa		18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	WHAMM	Q8TF30	809 aa		18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	CASKIN2	Q8WXE0	1202 aa		18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	POLD4	Q9HCU8	107 aa		18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	GGA2	Q9UJY4	613 aa		18.34	■□□□□ 0.53
CAPN12-211	ENST00000601685	LOC102724428	A0A0B4J2F2	783 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	GRID2IP	A4D2P6	1211 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	SRRM3	A6NNA2	597 aa	Predicted RBP	18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	HMGB1P1	B2RPK0	211 aa	Predicted RBP	18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	STXBP3	O00186	592 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	FGFR1OP	O95684	399 aa	Known RBP	18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	MAP2K2	P36507	400 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	SIK1	P57059	783 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	GRM4	Q14833	912 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	SBK1	Q52WX2	424 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	CAVIN4	Q5BKX8	364 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	TMED8	Q6PL24	325 aa	Predicted RBP	18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	NLRP14	Q86W24	1093 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	CCT8L2	Q96SF2	557 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	CRNKL1	Q9BZJ0	848 aa	Known RBP	18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	BARHL2	Q9NY43	387 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	LAMB1	P07942	1786 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	GNAQ	P50148	359 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	GUCY2F	P51841	1108 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	SLC35G1	Q2M3R5	365 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	C3orf67	Q6ZVT6	689 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	PNMA1	Q8ND90	353 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	MYCBPAP	Q8TBZ2	947 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	ATP8A2	Q9NTI2	1148 aa		18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	ARPP21	Q9UBL0	812 aa	Predicted RBP	18.33	■□□□□ 0.52
CAPN12-211	ENST00000601685	CASZ1	Q86V15	1759 aa		18.32	■□□□□ 0.52
CAPN12-211	ENST00000601685	UBE4A	Q14139	1066 aa		18.32	■□□□□ 0.52
CAPN12-211	ENST00000601685	HEATR3	Q7Z4Q2	680 aa		18.32	■□□□□ 0.52
CAPN12-211	ENST00000601685	DGKH	Q86XP1	1220 aa		18.32	■□□□□ 0.52
CAPN12-211	ENST00000601685	NSUN4	Q96CB9	384 aa	Known RBP	18.32	■□□□□ 0.52
CAPN12-211	ENST00000601685	MAD2L2	Q9UI95	211 aa		18.32	■□□□□ 0.52
CAPN12-211	ENST00000601685	TAF1	P21675	1872 aa		18.32	■□□□□ 0.52
CAPN12-211	ENST00000601685	SEC24C	P53992	1094 aa		18.32	■□□□□ 0.52
CAPN12-211	ENST00000601685	ITGB3BP	Q13352	177 aa	Predicted RBP	18.32	■□□□□ 0.52
CAPN12-211	ENST00000601685	CACNA2D4	Q7Z3S7	1137 aa		18.32	■□□□□ 0.52
CAPN12-211	ENST00000601685	KRT12	Q99456	494 aa		18.32	■□□□□ 0.52
CAPN12-211	ENST00000601685	MMTAG2	Q9BU76	263 aa	Known RBP	18.32	■□□□□ 0.52
CAPN12-211	ENST00000601685	CXorf56	Q9H5V9	222 aa		18.32	■□□□□ 0.52
CAPN12-211	ENST00000601685	IL17RB	Q9NRM6	502 aa		18.32	■□□□□ 0.52
CAPN12-211	ENST00000601685	MYH14	Q7Z406	1995 aa	Known RBP	18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	PALM	O75781	387 aa		18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	FAM107A	O95990	144 aa		18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	ATP2B2	Q01814	1243 aa		18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	CDC37	Q16543	378 aa	Predicted RBP	18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	ARHGAP27	Q6ZUM4	889 aa		18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	ANKS1A	Q92625	1134 aa		18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	FAM84B	Q96KN1	310 aa	Predicted RBP	18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	VCPKMT	Q9H867	229 aa		18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	CYTH3	O43739	400 aa		18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	ADAMTS2	O95450	1211 aa		18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	HDLBP	Q00341	1268 aa	Known RBP	18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	ACTN3	Q08043	901 aa	Predicted RBP	18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	ERFE	Q4G0M1	354 aa		18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	TDRD12	Q587J7	1177 aa	Known RBP	18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	PPP4R3A	Q6IN85	833 aa		18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	UNC13D	Q70J99	1090 aa		18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	TMC4	Q7Z404	712 aa		18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	GUF1	Q8N442	669 aa	Known RBP	18.31	■□□□□ 0.52
CAPN12-211	ENST00000601685	CCNT1	O60563	726 aa	Known RBP	18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	HSPA9	P38646	679 aa	Known RBP	18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	TEC	P42680	631 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	TFAP4	Q01664	338 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	MECOM	Q03112	1051 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	KCNMA1	Q12791	1236 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	PLCB4	Q15147	1175 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	NAB2	Q15742	525 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	LETM2	Q2VYF4	491 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	SV2B	Q7L1I2	683 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	INPP4A	Q96PE3	977 aa	Predicted RBP	18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	TMBIM4	Q9HC24	238 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	MINPP1	Q9UNW1	487 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	PLAA	Q9Y263	795 aa		18.3	■□□□□ 0.52
CAPN12-211	ENST00000601685	PVALEF	A0A1B0GWK0	134 aa		18.3	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms