RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 LY6KQ17RY6 165 aa18.89■□□□□ 0.61
SSBP4-211ENST00000601614 TRIM71Q2Q1W2 868 aaKnown RBP18.89■□□□□ 0.61
SSBP4-211ENST00000601614 DNERQ8NFT8 737 aa18.89■□□□□ 0.61
SSBP4-211ENST00000601614 TMEM47Q9BQJ4 181 aa18.89■□□□□ 0.61
SSBP4-211ENST00000601614 HDAC6Q9UBN7 1215 aa18.89■□□□□ 0.61
SSBP4-211ENST00000601614 GTF2IRD1Q9UHL9 959 aa18.89■□□□□ 0.61
SSBP4-211ENST00000601614 MYH6P13533 1939 aa18.88■□□□□ 0.61
SSBP4-211ENST00000601614 POTEB3A0JP26 581 aa18.88■□□□□ 0.61
SSBP4-211ENST00000601614 VPS53Q5VIR6 699 aa18.88■□□□□ 0.61
SSBP4-211ENST00000601614 POTEBQ6S5H4 581 aa18.88■□□□□ 0.61
SSBP4-211ENST00000601614 FBXO22Q8NEZ5 403 aa18.88■□□□□ 0.61
SSBP4-211ENST00000601614 DCXO43602 365 aa18.87■□□□□ 0.61
SSBP4-211ENST00000601614 PDHBP11177 359 aa18.87■□□□□ 0.61
SSBP4-211ENST00000601614 ZNF200P98182 395 aaPredicted RBP18.87■□□□□ 0.61
SSBP4-211ENST00000601614 HIC1Q14526 733 aa18.87■□□□□ 0.61
SSBP4-211ENST00000601614 ZNF618Q5T7W0 954 aa18.87■□□□□ 0.61
SSBP4-211ENST00000601614 SEPT14Q6ZU15 432 aa18.87■□□□□ 0.61
SSBP4-211ENST00000601614 CHST3Q7LGC8 479 aa18.87■□□□□ 0.61
SSBP4-211ENST00000601614 PI4K2BQ8TCG2 481 aa18.87■□□□□ 0.61
SSBP4-211ENST00000601614 TBC1D5Q92609 795 aa18.87■□□□□ 0.61
SSBP4-211ENST00000601614 GPATCH3Q96I76 525 aa18.87■□□□□ 0.61
SSBP4-211ENST00000601614 ANAPC4Q9UJX5 808 aa18.87■□□□□ 0.61
SSBP4-211ENST00000601614 WDR19Q8NEZ3 1342 aa18.86■□□□□ 0.61
SSBP4-211ENST00000601614 ORC4O43929 436 aa18.86■□□□□ 0.61
SSBP4-211ENST00000601614 PARNO95453 639 aaKnown RBP18.86■□□□□ 0.61
SSBP4-211ENST00000601614 GH1P01241 217 aa18.86■□□□□ 0.61
SSBP4-211ENST00000601614 FGRP09769 529 aa18.86■□□□□ 0.61
SSBP4-211ENST00000601614 ZP2Q05996 745 aa18.86■□□□□ 0.61
SSBP4-211ENST00000601614 IKBKEQ14164 716 aa18.86■□□□□ 0.61
SSBP4-211ENST00000601614 CSPP1Q1MSJ5 1256 aa18.86■□□□□ 0.61
SSBP4-211ENST00000601614 C20orf194Q5TEA3 1177 aa18.86■□□□□ 0.61
SSBP4-211ENST00000601614 MRPL38Q96DV4 380 aaKnown RBP18.86■□□□□ 0.61
SSBP4-211ENST00000601614 CRBNQ96SW2 442 aa18.86■□□□□ 0.61
SSBP4-211ENST00000601614 ALG1Q9BT22 464 aa18.86■□□□□ 0.61
SSBP4-211ENST00000601614 COL20A1Q9P218 1284 aa18.86■□□□□ 0.61
SSBP4-211ENST00000601614 RALGAPA2Q2PPJ7 1873 aa18.86■□□□□ 0.61
SSBP4-211ENST00000601614 TECTAO75443 2155 aa18.85■□□□□ 0.61
SSBP4-211ENST00000601614 TOP1P11387 765 aaKnown RBP18.85■□□□□ 0.61
SSBP4-211ENST00000601614 PSEN2P49810 448 aa18.85■□□□□ 0.61
SSBP4-211ENST00000601614 HTRA4P83105 476 aaPredicted RBP18.85■□□□□ 0.61
SSBP4-211ENST00000601614 USH1GQ495M9 461 aa18.85■□□□□ 0.61
SSBP4-211ENST00000601614 SP7Q8TDD2 431 aaPredicted RBP18.85■□□□□ 0.61
SSBP4-211ENST00000601614 OTUD7AQ8TE49 926 aaPredicted RBP18.85■□□□□ 0.61
SSBP4-211ENST00000601614 TAAR1Q96RJ0 339 aa18.85■□□□□ 0.61
SSBP4-211ENST00000601614 MPHOSPH6Q99547 160 aaKnown RBP18.85■□□□□ 0.61
SSBP4-211ENST00000601614 FSD1Q9BTV5 496 aa18.85■□□□□ 0.61
SSBP4-211ENST00000601614 CPVLQ9H3G5 476 aa18.85■□□□□ 0.61
SSBP4-211ENST00000601614 DCTPP1Q9H773 170 aa18.85■□□□□ 0.61
SSBP4-211ENST00000601614 INSL6Q9Y581 213 aa18.85■□□□□ 0.61
SSBP4-211ENST00000601614 C5orf42Q9H799 3197 aa18.84■□□□□ 0.61
SSBP4-211ENST00000601614 HAS3O00219 553 aa18.84■□□□□ 0.61
SSBP4-211ENST00000601614 EFCAB14O75071 495 aa18.84■□□□□ 0.61
SSBP4-211ENST00000601614 LGR5O75473 907 aa18.84■□□□□ 0.61
SSBP4-211ENST00000601614 ZNF286BP0CG31 522 aa18.84■□□□□ 0.61
SSBP4-211ENST00000601614 CASTP20810 708 aaKnown RBP18.84■□□□□ 0.61
SSBP4-211ENST00000601614 ZNF543Q08ER8 600 aa18.84■□□□□ 0.61
SSBP4-211ENST00000601614 PTK7Q13308 1070 aa18.84■□□□□ 0.61
SSBP4-211ENST00000601614 EPC2Q52LR7 807 aa18.84■□□□□ 0.61
SSBP4-211ENST00000601614 TCEAL5Q5H9L2 206 aa18.84■□□□□ 0.61
SSBP4-211ENST00000601614 HFE2Q6ZVN8 426 aa18.84■□□□□ 0.61
SSBP4-211ENST00000601614 MYOCDQ8IZQ8 938 aa18.84■□□□□ 0.61
SSBP4-211ENST00000601614 DBF4BQ8NFT6 615 aa18.84■□□□□ 0.61
SSBP4-211ENST00000601614 OSBPL7Q9BZF2 842 aa18.84■□□□□ 0.61
SSBP4-211ENST00000601614 C19orf67A6NJJ6 358 aa18.83■□□□□ 0.6
SSBP4-211ENST00000601614 F2P00734 622 aa18.83■□□□□ 0.6
SSBP4-211ENST00000601614 SNHG28P0DPA3 235 aa18.83■□□□□ 0.6
SSBP4-211ENST00000601614 MFSD10Q14728 455 aa18.83■□□□□ 0.6
SSBP4-211ENST00000601614 COL19A1Q14993 1142 aa18.83■□□□□ 0.6
SSBP4-211ENST00000601614 DGKDQ16760 1214 aa18.83■□□□□ 0.6
SSBP4-211ENST00000601614 PUS10Q3MIT2 529 aaKnown RBP18.83■□□□□ 0.6
SSBP4-211ENST00000601614 RRP12Q5JTH9 1297 aaKnown RBP18.83■□□□□ 0.6
SSBP4-211ENST00000601614 C7orf31Q8N865 590 aa18.83■□□□□ 0.6
SSBP4-211ENST00000601614 PABPC5Q96DU9 382 aaKnown RBP18.83■□□□□ 0.6
SSBP4-211ENST00000601614 PHOX2BQ99453 314 aa18.83■□□□□ 0.6
SSBP4-211ENST00000601614 KIAA0753Q2KHM9 967 aa18.82■□□□□ 0.6
SSBP4-211ENST00000601614 BANK1Q8NDB2 785 aa18.82■□□□□ 0.6
SSBP4-211ENST00000601614 SYTL5Q8TDW5 730 aaPredicted RBP18.82■□□□□ 0.6
SSBP4-211ENST00000601614 SNX27Q96L92 541 aa18.82■□□□□ 0.6
SSBP4-211ENST00000601614 KCNH6Q9H252 994 aa18.82■□□□□ 0.6
SSBP4-211ENST00000601614 CHMP4BQ9H444 224 aaKnown RBP18.82■□□□□ 0.6
SSBP4-211ENST00000601614 TOMM22Q9NS69 142 aa18.82■□□□□ 0.6
SSBP4-211ENST00000601614 TCP11L1Q9NUJ3 509 aa18.82■□□□□ 0.6
SSBP4-211ENST00000601614 DDX41Q9UJV9 622 aaKnown RBP18.82■□□□□ 0.6
SSBP4-211ENST00000601614 COL4A6Q14031 1691 aa18.82■□□□□ 0.6
SSBP4-211ENST00000601614 TTC41PQ6P2S7 1318 aa18.81■□□□□ 0.6
SSBP4-211ENST00000601614 TRIOO75962 3097 aa18.81■□□□□ 0.6
SSBP4-211ENST00000601614 B4DLN1 442 aa18.81■□□□□ 0.6
SSBP4-211ENST00000601614 H3BNC9 293 aa18.81■□□□□ 0.6
SSBP4-211ENST00000601614 GOLGA8HP0CJ92 632 aa18.81■□□□□ 0.6
SSBP4-211ENST00000601614 IRS1P35568 1242 aa18.81■□□□□ 0.6
SSBP4-211ENST00000601614 LTBRP36941 435 aa18.81■□□□□ 0.6
SSBP4-211ENST00000601614 MRPL12P52815 198 aaKnown RBP18.81■□□□□ 0.6
SSBP4-211ENST00000601614 TIGD5Q53EQ6 642 aa18.81■□□□□ 0.6
SSBP4-211ENST00000601614 RGS22Q8NE09 1264 aa18.81■□□□□ 0.6
SSBP4-211ENST00000601614 PNMA2Q9UL42 364 aa18.81■□□□□ 0.6
SSBP4-211ENST00000601614 AMHP03971 560 aa18.8■□□□□ 0.6
SSBP4-211ENST00000601614 GPM6BQ13491 265 aa18.8■□□□□ 0.6
SSBP4-211ENST00000601614 PTPROQ16827 1216 aa18.8■□□□□ 0.6
SSBP4-211ENST00000601614 PLEKHG4Q58EX7 1191 aa18.8■□□□□ 0.6
SSBP4-211ENST00000601614 EP400NLQ6ZTU2 488 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms