RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 TRMT13Q9NUP7 481 aaKnown RBP26.23■■□□□ 1.79
SSBP4-209ENST00000601357 MMP3P08254 477 aa26.22■■□□□ 1.79
SSBP4-209ENST00000601357 SUPT20HL2P0C7V6 817 aa26.22■■□□□ 1.79
SSBP4-209ENST00000601357 IL31RAQ8NI17 732 aa26.22■■□□□ 1.79
SSBP4-209ENST00000601357 LZTS2Q9BRK4 669 aa26.22■■□□□ 1.79
SSBP4-209ENST00000601357 IL23AQ9NPF7 189 aa26.22■■□□□ 1.79
SSBP4-209ENST00000601357 FRMPD4Q14CM0 1322 aa26.21■■□□□ 1.79
SSBP4-209ENST00000601357 EYSQ5T1H1 3165 aa26.21■■□□□ 1.79
SSBP4-209ENST00000601357 CCDC69A6NI79 296 aa26.21■■□□□ 1.79
SSBP4-209ENST00000601357 PTPN11Q06124 597 aaPredicted RBP26.21■■□□□ 1.79
SSBP4-209ENST00000601357 PSRC1Q6PGN9 363 aaPredicted RBP26.21■■□□□ 1.79
SSBP4-209ENST00000601357 NFXL1Q6ZNB6 911 aa26.21■■□□□ 1.79
SSBP4-209ENST00000601357 ZNF365Q70YC5 407 aa26.21■■□□□ 1.79
SSBP4-209ENST00000601357 CDC45O75419 566 aa26.2■■□□□ 1.78
SSBP4-209ENST00000601357 PLEKHA8P1O95397 391 aa26.2■■□□□ 1.78
SSBP4-209ENST00000601357 CALM1P0DP23 149 aa26.2■■□□□ 1.78
SSBP4-209ENST00000601357 CALM2P0DP24 149 aa26.2■■□□□ 1.78
SSBP4-209ENST00000601357 CALM3P0DP25 149 aa26.2■■□□□ 1.78
SSBP4-209ENST00000601357 ACRP10323 421 aa26.2■■□□□ 1.78
SSBP4-209ENST00000601357 RNF20Q5VTR2 975 aa26.2■■□□□ 1.78
SSBP4-209ENST00000601357 SGMS1Q86VZ5 419 aa26.2■■□□□ 1.78
SSBP4-209ENST00000601357 SRBD1Q8N5C6 995 aaKnown RBP26.2■■□□□ 1.78
SSBP4-209ENST00000601357 PIBF1Q8WXW3 757 aa26.2■■□□□ 1.78
SSBP4-209ENST00000601357 RRP36Q96EU6 259 aaKnown RBP26.2■■□□□ 1.78
SSBP4-209ENST00000601357 FAM161BQ96MY7 647 aa26.2■■□□□ 1.78
SSBP4-209ENST00000601357 TTYH1Q9H313 450 aaPredicted RBP26.2■■□□□ 1.78
SSBP4-209ENST00000601357 MRVI1Q9Y6F6 885 aa26.2■■□□□ 1.78
SSBP4-209ENST00000601357 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.19■■□□□ 1.78
SSBP4-209ENST00000601357 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.19■■□□□ 1.78
SSBP4-209ENST00000601357 CYP2C9P11712 490 aa26.19■■□□□ 1.78
SSBP4-209ENST00000601357 MYCLP12524 364 aaPredicted RBP26.19■■□□□ 1.78
SSBP4-209ENST00000601357 GNAQP50148 359 aa26.19■■□□□ 1.78
SSBP4-209ENST00000601357 CCL23P55773 120 aa26.19■■□□□ 1.78
SSBP4-209ENST00000601357 TSGA10IPQ3SY00 556 aa26.19■■□□□ 1.78
SSBP4-209ENST00000601357 FCHSD1Q86WN1 690 aa26.19■■□□□ 1.78
SSBP4-209ENST00000601357 PPP1R13LQ8WUF5 828 aa26.19■■□□□ 1.78
SSBP4-209ENST00000601357 KAT2BQ92831 832 aa26.19■■□□□ 1.78
SSBP4-209ENST00000601357 VWCEQ96DN2 955 aa26.19■■□□□ 1.78
SSBP4-209ENST00000601357 SEMA6BQ9H3T3 888 aa26.19■■□□□ 1.78
SSBP4-209ENST00000601357 MYH7BA7E2Y1 1941 aa26.19■■□□□ 1.78
SSBP4-209ENST00000601357 RXRAP19793 462 aa26.18■■□□□ 1.78
SSBP4-209ENST00000601357 LAMC2Q13753 1193 aa26.18■■□□□ 1.78
SSBP4-209ENST00000601357 FAM47CQ5HY64 1035 aa26.18■■□□□ 1.78
SSBP4-209ENST00000601357 KCNV1Q6PIU1 500 aa26.18■■□□□ 1.78
SSBP4-209ENST00000601357 PPTC7Q8NI37 304 aa26.18■■□□□ 1.78
SSBP4-209ENST00000601357 HERVK_113Q902F9 699 aa26.18■■□□□ 1.78
SSBP4-209ENST00000601357 LRRC2Q9BYS8 371 aa26.18■■□□□ 1.78
SSBP4-209ENST00000601357 TMEM265A0A087WTH1 108 aa26.17■■□□□ 1.78
SSBP4-209ENST00000601357 HOXD8P13378 290 aaPredicted RBP26.17■■□□□ 1.78
SSBP4-209ENST00000601357 CASTP20810 708 aaKnown RBP26.17■■□□□ 1.78
SSBP4-209ENST00000601357 CCND2P30279 289 aa26.17■■□□□ 1.78
SSBP4-209ENST00000601357 DGKDQ16760 1214 aa26.17■■□□□ 1.78
SSBP4-209ENST00000601357 SESTD1Q86VW0 696 aa26.17■■□□□ 1.78
SSBP4-209ENST00000601357 SLC12A7Q9Y666 1083 aa26.17■■□□□ 1.78
SSBP4-209ENST00000601357 TANC1Q9C0D5 1861 aa26.17■■□□□ 1.78
SSBP4-209ENST00000601357 PIK3CDO00329 1044 aa26.16■■□□□ 1.78
SSBP4-209ENST00000601357 TGFB3P10600 412 aa26.16■■□□□ 1.78
SSBP4-209ENST00000601357 EXOSC10Q01780 885 aaKnown RBP26.16■■□□□ 1.78
SSBP4-209ENST00000601357 MYSM1Q5VVJ2 828 aa26.16■■□□□ 1.78
SSBP4-209ENST00000601357 DHX37Q8IY37 1157 aaKnown RBP26.16■■□□□ 1.78
SSBP4-209ENST00000601357 RASEFQ8IZ41 740 aa26.16■■□□□ 1.78
SSBP4-209ENST00000601357 CMTR1Q8N1G2 835 aaKnown RBP26.16■■□□□ 1.78
SSBP4-209ENST00000601357 CCDC136Q96JN2 1154 aa26.16■■□□□ 1.78
SSBP4-209ENST00000601357 NEK1Q96PY6 1258 aa26.16■■□□□ 1.78
SSBP4-209ENST00000601357 CTAGE1Q96RT6 745 aa26.16■■□□□ 1.78
SSBP4-209ENST00000601357 SEC63Q9UGP8 760 aaKnown RBP26.16■■□□□ 1.78
SSBP4-209ENST00000601357 FGBP02675 491 aa26.15■■□□□ 1.78
SSBP4-209ENST00000601357 DNAJB2P25686 324 aa26.15■■□□□ 1.78
SSBP4-209ENST00000601357 MRPS9P82933 396 aaKnown RBP26.15■■□□□ 1.78
SSBP4-209ENST00000601357 SP2Q02086 613 aa26.15■■□□□ 1.78
SSBP4-209ENST00000601357 CELF3Q5SZQ8 465 aaKnown RBP26.15■■□□□ 1.78
SSBP4-209ENST00000601357 FANCBQ8NB91 859 aa26.15■■□□□ 1.78
SSBP4-209ENST00000601357 SCLYQ96I15 445 aa26.15■■□□□ 1.78
SSBP4-209ENST00000601357 PITPNM1O00562 1244 aa26.14■■□□□ 1.78
SSBP4-209ENST00000601357 MEIS2O14770 477 aa26.14■■□□□ 1.78
SSBP4-209ENST00000601357 STAM2O75886 525 aa26.14■■□□□ 1.78
SSBP4-209ENST00000601357 F2P00734 622 aa26.14■■□□□ 1.78
SSBP4-209ENST00000601357 UBA1P22314 1058 aaKnown RBP26.14■■□□□ 1.78
SSBP4-209ENST00000601357 ADCK5Q3MIX3 580 aa26.14■■□□□ 1.78
SSBP4-209ENST00000601357 TMTC3Q6ZXV5 915 aa26.14■■□□□ 1.78
SSBP4-209ENST00000601357 RAB11FIP4Q86YS3 637 aa26.14■■□□□ 1.78
SSBP4-209ENST00000601357 GPKOWQ92917 476 aaPredicted RBP eCLIP26.14■■□□□ 1.78
SSBP4-209ENST00000601357 ZFP91Q96JP5 570 aaPredicted RBP26.14■■□□□ 1.78
SSBP4-209ENST00000601357 INPP4AQ96PE3 977 aaPredicted RBP26.14■■□□□ 1.78
SSBP4-209ENST00000601357 CDX2Q99626 313 aaPredicted RBP26.14■■□□□ 1.78
SSBP4-209ENST00000601357 CXXC1Q9P0U4 656 aaPredicted RBP26.14■■□□□ 1.78
SSBP4-209ENST00000601357 SCN5AQ14524 2016 aa26.14■■□□□ 1.77
SSBP4-209ENST00000601357 UNC80Q8N2C7 3258 aa26.13■■□□□ 1.77
SSBP4-209ENST00000601357 HAS3O00219 553 aa26.13■■□□□ 1.77
SSBP4-209ENST00000601357 HSDL1Q3SXM5 330 aa26.13■■□□□ 1.77
SSBP4-209ENST00000601357 APOA5Q6Q788 366 aa26.13■■□□□ 1.77
SSBP4-209ENST00000601357 USP17L6PQ6QN14 398 aa26.13■■□□□ 1.77
SSBP4-209ENST00000601357 DHX32Q7L7V1 743 aaKnown RBP26.13■■□□□ 1.77
SSBP4-209ENST00000601357 RPUSD2Q8IZ73 545 aaKnown RBP26.13■■□□□ 1.77
SSBP4-209ENST00000601357 PPFIA4O75335 1185 aa26.12■■□□□ 1.77
SSBP4-209ENST00000601357 GGPS1O95749 300 aa26.12■■□□□ 1.77
SSBP4-209ENST00000601357 PFKMP08237 780 aa26.12■■□□□ 1.77
SSBP4-209ENST00000601357 ICAM3P32942 547 aa26.12■■□□□ 1.77
SSBP4-209ENST00000601357 GDF6Q6KF10 455 aaPredicted RBP26.12■■□□□ 1.77
SSBP4-209ENST00000601357 MICU3Q86XE3 530 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms