RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 STXBP2Q15833 593 aa23.26■■□□□ 1.31
PNKP-215ENST00000600910 XRRA1Q6P2D8 792 aa23.26■■□□□ 1.31
PNKP-215ENST00000600910 ZNF396Q96N95 335 aaPredicted RBP23.26■■□□□ 1.31
PNKP-215ENST00000600910 USP28Q96RU2 1077 aa23.26■■□□□ 1.31
PNKP-215ENST00000600910 RTEL1Q9NZ71 1219 aa23.26■■□□□ 1.31
PNKP-215ENST00000600910 SRRDQ9UH36 339 aa23.26■■□□□ 1.31
PNKP-215ENST00000600910 FAM86B1E9PN63 330 aa23.25■■□□□ 1.31
PNKP-215ENST00000600910 FOXN1O15353 648 aa23.25■■□□□ 1.31
PNKP-215ENST00000600910 FAM86B2P0C5J1 330 aa23.25■■□□□ 1.31
PNKP-215ENST00000600910 MCM7P33993 719 aa23.25■■□□□ 1.31
PNKP-215ENST00000600910 PPP4R3AQ6IN85 833 aa23.25■■□□□ 1.31
PNKP-215ENST00000600910 MOXD1Q6UVY6 613 aa23.25■■□□□ 1.31
PNKP-215ENST00000600910 ARMCX2Q7L311 632 aa23.25■■□□□ 1.31
PNKP-215ENST00000600910 MORC4Q8TE76 937 aa23.25■■□□□ 1.31
PNKP-215ENST00000600910 NAP1L4Q99733 375 aaKnown RBP23.25■■□□□ 1.31
PNKP-215ENST00000600910 TFIP11Q9UBB9 837 aaKnown RBP23.25■■□□□ 1.31
PNKP-215ENST00000600910 LRRC37A2A6NM11 1700 aa23.24■■□□□ 1.31
PNKP-215ENST00000600910 CYP3A7-CYP3A51PA0A087WV96 503 aa23.24■■□□□ 1.31
PNKP-215ENST00000600910 HSPA1AP0DMV8 641 aaKnown RBP23.24■■□□□ 1.31
PNKP-215ENST00000600910 HSPA1BP0DMV9 641 aaKnown RBP23.24■■□□□ 1.31
PNKP-215ENST00000600910 GCFC2P16383 781 aaKnown RBP23.24■■□□□ 1.31
PNKP-215ENST00000600910 CYP3A7P24462 503 aa23.24■■□□□ 1.31
PNKP-215ENST00000600910 CEBPZQ03701 1054 aaKnown RBP23.24■■□□□ 1.31
PNKP-215ENST00000600910 CCL14Q16627 93 aa23.24■■□□□ 1.31
PNKP-215ENST00000600910 CEP55Q53EZ4 464 aa23.24■■□□□ 1.31
PNKP-215ENST00000600910 MAMDC4Q6UXC1 1216 aa23.24■■□□□ 1.31
PNKP-215ENST00000600910 CYP2W1Q8TAV3 490 aa23.24■■□□□ 1.31
PNKP-215ENST00000600910 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.24■■□□□ 1.31
PNKP-215ENST00000600910 FLRT1Q9NZU1 646 aa23.24■■□□□ 1.31
PNKP-215ENST00000600910 CLIC4Q9Y696 253 aa23.24■■□□□ 1.31
PNKP-215ENST00000600910 HSPA8P11142 646 aaKnown RBP23.23■■□□□ 1.31
PNKP-215ENST00000600910 XRCC5P13010 732 aaKnown RBP23.23■■□□□ 1.31
PNKP-215ENST00000600910 ITGB5P18084 799 aa23.23■■□□□ 1.31
PNKP-215ENST00000600910 SF3A1Q15459 793 aaKnown RBP23.23■■□□□ 1.31
PNKP-215ENST00000600910 PRR16Q569H4 304 aa23.23■■□□□ 1.31
PNKP-215ENST00000600910 MXRA8Q9BRK3 442 aa23.23■■□□□ 1.31
PNKP-215ENST00000600910 TINF2Q9BSI4 451 aa23.23■■□□□ 1.31
PNKP-215ENST00000600910 DDX25Q9UHL0 483 aaKnown RBP23.23■■□□□ 1.31
PNKP-215ENST00000600910 UBIAD1Q9Y5Z9 338 aa23.23■■□□□ 1.31
PNKP-215ENST00000600910 IGLV3-22A0A075B6J6 115 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 SLC37A4O43826 429 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 EIF3JO75822 258 aaKnown RBP23.22■■□□□ 1.31
PNKP-215ENST00000600910 STAM2O75886 525 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 NCLP19338 710 aaKnown RBP23.22■■□□□ 1.31
PNKP-215ENST00000600910 ANO1Q5XXA6 986 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 ATL3Q6DD88 541 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 MSL3Q8N5Y2 521 aaKnown RBP23.22■■□□□ 1.31
PNKP-215ENST00000600910 MBOAT7Q96N66 472 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 MCM3APO60318 1980 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 Q4G0T1 1027 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 OLFML2BQ68BL8 750 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 EEPD1Q7L9B9 569 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 LENG9Q96B70 501 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 WDR11Q9BZH6 1224 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 POLR3EQ9NVU0 708 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 CFAP45Q9UL16 551 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 TRIM17Q9Y577 477 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 SYNGAP1Q96PV0 1343 aa23.22■■□□□ 1.31
PNKP-215ENST00000600910 CASP8AP2Q9UKL3 1982 aa23.21■■□□□ 1.31
PNKP-215ENST00000600910 MEIS1O00470 390 aa23.21■■□□□ 1.31
PNKP-215ENST00000600910 NEMFO60524 1076 aa23.21■■□□□ 1.31
PNKP-215ENST00000600910 RGS20O76081 388 aa23.21■■□□□ 1.31
PNKP-215ENST00000600910 KRT85P78386 507 aa23.21■■□□□ 1.31
PNKP-215ENST00000600910 ORC2Q13416 577 aaPredicted RBP23.21■■□□□ 1.31
PNKP-215ENST00000600910 IRF5Q13568 498 aa23.21■■□□□ 1.31
PNKP-215ENST00000600910 OTOP1Q7RTM1 612 aa23.21■■□□□ 1.31
PNKP-215ENST00000600910 PLA2G4DQ86XP0 818 aa23.21■■□□□ 1.31
PNKP-215ENST00000600910 POTEDQ86YR6 584 aa23.21■■□□□ 1.31
PNKP-215ENST00000600910 INPP4AQ96PE3 977 aaPredicted RBP23.21■■□□□ 1.31
PNKP-215ENST00000600910 JADE2Q9NQC1 790 aa23.21■■□□□ 1.31
PNKP-215ENST00000600910 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.21■■□□□ 1.31
PNKP-215ENST00000600910 SNAI1O95863 264 aaPredicted RBP23.2■■□□□ 1.3
PNKP-215ENST00000600910 NIPA1Q7RTP0 329 aa23.2■■□□□ 1.3
PNKP-215ENST00000600910 CEP131Q9UPN4 1083 aa23.2■■□□□ 1.3
PNKP-215ENST00000600910 CNPY2Q9Y2B0 182 aa23.2■■□□□ 1.3
PNKP-215ENST00000600910 NASPP49321 788 aaPredicted RBP23.19■■□□□ 1.3
PNKP-215ENST00000600910 SETQ01105 290 aaPredicted RBP23.19■■□□□ 1.3
PNKP-215ENST00000600910 PTGDRQ13258 359 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 MTMR1Q13613 665 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 GNPTABQ3T906 1256 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 NLRX1Q86UT6 975 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 FBXO16Q8IX29 292 aaPredicted RBP23.19■■□□□ 1.3
PNKP-215ENST00000600910 RAET1EQ8TD07 263 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 TRIB2Q92519 343 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 TMEM60Q9H2L4 133 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 IGHA2P01877 340 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 ARP10275 920 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 CYP2C19P33261 490 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 CTCFP49711 727 aaPredicted RBP23.19■■□□□ 1.3
PNKP-215ENST00000600910 LBX1P52954 281 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 PRMT2P55345 433 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 PTPAQ15257 358 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 SEPT14Q6ZU15 432 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 GPRASP2Q96D09 838 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 KCNH7Q9NS40 1196 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 MRVI1Q9Y6F6 885 aa23.19■■□□□ 1.3
PNKP-215ENST00000600910 TCHHQ07283 1943 aa23.18■■□□□ 1.3
PNKP-215ENST00000600910 BMP15O95972 392 aa23.18■■□□□ 1.3
PNKP-215ENST00000600910 CALCRLQ16602 461 aa23.18■■□□□ 1.3
PNKP-215ENST00000600910 C4orf32Q8N8J7 132 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms