RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 RNPC3Q96LT9 517 aaKnown RBP18.07■□□□□ 0.48
IRF3-226ENST00000600453 MYL10Q9BUA6 226 aa18.07■□□□□ 0.48
IRF3-226ENST00000600453 ALDH8A1Q9H2A2 487 aaPredicted RBP18.07■□□□□ 0.48
IRF3-226ENST00000600453 HIPK3Q9H422 1215 aa18.07■□□□□ 0.48
IRF3-226ENST00000600453 KIAA1217Q5T5P2 1943 aa18.06■□□□□ 0.48
IRF3-226ENST00000600453 DGKDQ16760 1214 aa18.06■□□□□ 0.48
IRF3-226ENST00000600453 NBPF20Q3BBV1 942 aa18.06■□□□□ 0.48
IRF3-226ENST00000600453 DHX37Q8IY37 1157 aaKnown RBP18.06■□□□□ 0.48
IRF3-226ENST00000600453 RPUSD2Q8IZ73 545 aaKnown RBP18.06■□□□□ 0.48
IRF3-226ENST00000600453 SMARCC2Q8TAQ2 1214 aa18.06■□□□□ 0.48
IRF3-226ENST00000600453 PIBF1Q8WXW3 757 aa18.06■□□□□ 0.48
IRF3-226ENST00000600453 PPP1R12CQ9BZL4 782 aa18.06■□□□□ 0.48
IRF3-226ENST00000600453 RBM28Q9NW13 759 aaKnown RBP18.06■□□□□ 0.48
IRF3-226ENST00000600453 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.05■□□□□ 0.48
IRF3-226ENST00000600453 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.05■□□□□ 0.48
IRF3-226ENST00000600453 B4GALT4O60513 344 aa18.05■□□□□ 0.48
IRF3-226ENST00000600453 REC8O95072 547 aa18.05■□□□□ 0.48
IRF3-226ENST00000600453 EXOSC10Q01780 885 aaKnown RBP18.05■□□□□ 0.48
IRF3-226ENST00000600453 GNPTABQ3T906 1256 aa18.05■□□□□ 0.48
IRF3-226ENST00000600453 FAM47CQ5HY64 1035 aa18.05■□□□□ 0.48
IRF3-226ENST00000600453 XRRA1Q6P2D8 792 aa18.05■□□□□ 0.48
IRF3-226ENST00000600453 PSRC1Q6PGN9 363 aaPredicted RBP18.05■□□□□ 0.48
IRF3-226ENST00000600453 SRBD1Q8N5C6 995 aaKnown RBP18.05■□□□□ 0.48
IRF3-226ENST00000600453 AFG1LQ8WV93 481 aa18.05■□□□□ 0.48
IRF3-226ENST00000600453 TRPV6Q9H1D0 765 aa18.05■□□□□ 0.48
IRF3-226ENST00000600453 MTIF3Q9H2K0 278 aaKnown RBP18.05■□□□□ 0.48
IRF3-226ENST00000600453 PIK3CDO00329 1044 aa18.04■□□□□ 0.48
IRF3-226ENST00000600453 PPFIA4O75335 1185 aa18.04■□□□□ 0.48
IRF3-226ENST00000600453 MMP3P08254 477 aa18.04■□□□□ 0.48
IRF3-226ENST00000600453 CSF2RAP15509 400 aa18.04■□□□□ 0.48
IRF3-226ENST00000600453 FGD1P98174 961 aa18.04■□□□□ 0.48
IRF3-226ENST00000600453 ARHGAP1Q07960 439 aa18.04■□□□□ 0.48
IRF3-226ENST00000600453 ZNF697Q5TEC3 545 aa18.04■□□□□ 0.48
IRF3-226ENST00000600453 KATNAL1Q9BW62 490 aa18.04■□□□□ 0.48
IRF3-226ENST00000600453 LRRC2Q9BYS8 371 aa18.04■□□□□ 0.48
IRF3-226ENST00000600453 IL23AQ9NPF7 189 aa18.04■□□□□ 0.48
IRF3-226ENST00000600453 SCN10AQ9Y5Y9 1956 aa18.03■□□□□ 0.48
IRF3-226ENST00000600453 EPB41L2O43491 1005 aaKnown RBP18.03■□□□□ 0.48
IRF3-226ENST00000600453 CYP2C18P33260 490 aa18.03■□□□□ 0.48
IRF3-226ENST00000600453 EPHB4P54760 987 aa18.03■□□□□ 0.48
IRF3-226ENST00000600453 ERICH6BQ5W0A0 696 aa18.03■□□□□ 0.48
IRF3-226ENST00000600453 TMTC3Q6ZXV5 915 aa18.03■□□□□ 0.48
IRF3-226ENST00000600453 TEX2Q8IWB9 1127 aa18.03■□□□□ 0.48
IRF3-226ENST00000600453 PPTC7Q8NI37 304 aa18.03■□□□□ 0.48
IRF3-226ENST00000600453 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.03■□□□□ 0.482e-6■□□□□ 10.3
IRF3-226ENST00000600453 NOC4LQ9BVI4 516 aaKnown RBP18.03■□□□□ 0.48
IRF3-226ENST00000600453 PSTPIP2Q9H939 334 aa18.03■□□□□ 0.48
IRF3-226ENST00000600453 MTMR10Q9NXD2 777 aa18.03■□□□□ 0.48
IRF3-226ENST00000600453 NOD1Q9Y239 953 aa18.03■□□□□ 0.48
IRF3-226ENST00000600453 LAMA3Q16787 3333 aa18.02■□□□□ 0.48
IRF3-226ENST00000600453 ZBTB43O43298 467 aa18.02■□□□□ 0.48
IRF3-226ENST00000600453 PLEKHA8P1O95397 391 aa18.02■□□□□ 0.48
IRF3-226ENST00000600453 FGBP02675 491 aa18.02■□□□□ 0.48
IRF3-226ENST00000600453 RXRAP19793 462 aa18.02■□□□□ 0.48
IRF3-226ENST00000600453 RCAN1P53805 252 aa18.02■□□□□ 0.48
IRF3-226ENST00000600453 TMEM240Q5SV17 173 aa18.02■□□□□ 0.48
IRF3-226ENST00000600453 CELF3Q5SZQ8 465 aaKnown RBP18.02■□□□□ 0.48
IRF3-226ENST00000600453 MYSM1Q5VVJ2 828 aa18.02■□□□□ 0.48
IRF3-226ENST00000600453 MICU3Q86XE3 530 aa18.02■□□□□ 0.48
IRF3-226ENST00000600453 RASEFQ8IZ41 740 aa18.02■□□□□ 0.48
IRF3-226ENST00000600453 RETREG2Q8NC44 543 aa18.02■□□□□ 0.48
IRF3-226ENST00000600453 MLXIPQ9HAP2 919 aa18.02■□□□□ 0.48
IRF3-226ENST00000600453 TRMT13Q9NUP7 481 aaKnown RBP18.02■□□□□ 0.48
IRF3-226ENST00000600453 SZT2Q5T011 3432 aa18.02■□□□□ 0.47
IRF3-226ENST00000600453 MYH7BA7E2Y1 1941 aa18.02■□□□□ 0.47
IRF3-226ENST00000600453 TMEM265A0A087WTH1 108 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 CCDC196A0A1B0GTZ2 297 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 RGS20O76081 388 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 PFKMP08237 780 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 PSMA5P28066 241 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 ICAM3P32942 547 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 BFSP2Q13515 415 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 NEDD9Q14511 834 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 APOA5Q6Q788 366 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 ZNF365Q70YC5 407 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 C16orf59Q7L2K0 433 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 SESTD1Q86VW0 696 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 CCDC82Q8N4S0 544 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 CCDC155Q8N6L0 562 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 KCNB2Q92953 911 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 SPATA33Q96N06 139 aa18.01■□□□□ 0.47
IRF3-226ENST00000600453 PITPNM1O00562 1244 aa18■□□□□ 0.47
IRF3-226ENST00000600453 MEIS2O14770 477 aa18■□□□□ 0.47
IRF3-226ENST00000600453 GGPS1O95749 300 aa18■□□□□ 0.47
IRF3-226ENST00000600453 HSPA4P34932 840 aa18■□□□□ 0.47
IRF3-226ENST00000600453 RFC2P35250 354 aa18■□□□□ 0.47
IRF3-226ENST00000600453 CCL23P55773 120 aa18■□□□□ 0.47
IRF3-226ENST00000600453 CHMP4BP1P59074 171 aa18■□□□□ 0.47
IRF3-226ENST00000600453 RTN1Q16799 776 aa18■□□□□ 0.47
IRF3-226ENST00000600453 ADCK5Q3MIX3 580 aa18■□□□□ 0.47
IRF3-226ENST00000600453 PCNX4Q63HM2 1172 aa18■□□□□ 0.47
IRF3-226ENST00000600453 USP17L6PQ6QN14 398 aa18■□□□□ 0.47
IRF3-226ENST00000600453 Q7L0L9 218 aa18■□□□□ 0.47
IRF3-226ENST00000600453 NLRX1Q86UT6 975 aa18■□□□□ 0.47
IRF3-226ENST00000600453 CMTR1Q8N1G2 835 aaKnown RBP18■□□□□ 0.47
IRF3-226ENST00000600453 C7orf31Q8N865 590 aa18■□□□□ 0.47
IRF3-226ENST00000600453 GIMAP8Q8ND71 665 aaPredicted RBP18■□□□□ 0.47
IRF3-226ENST00000600453 EHMT1Q9H9B1 1298 aa18■□□□□ 0.47
IRF3-226ENST00000600453 STXBP5LQ9Y2K9 1186 aa18■□□□□ 0.47
IRF3-226ENST00000600453 FRMPD4Q14CM0 1322 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms