RNA–Protein interactions for RNA: ENST00000600447.1

PPFIA4-212, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 385 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-212ENST00000600447 NEFLP07196 543 aa16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 MYCLP12524 364 aaPredicted RBP16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 CCND2P30279 289 aa16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 CYP2C18P33260 490 aa16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 KRT32Q14532 448 aa16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 NBPF20Q3BBV1 942 aa16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 NFRKBQ6P4R8 1299 aa16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 KCNV1Q6PIU1 500 aa16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 Q7L0L9 218 aa16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 FANCBQ8NB91 859 aa16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 AFG1LQ8WV93 481 aa16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 RNPC3Q96LT9 517 aaKnown RBP16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 NOC4LQ9BVI4 516 aaKnown RBP16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 HIPK3Q9H422 1215 aa16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 MRVI1Q9Y6F6 885 aa16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 FRMPD4Q14CM0 1322 aa16.64■□□□□ 0.25
PPFIA4-212ENST00000600447 RGS20O76081 388 aa16.63■□□□□ 0.25
PPFIA4-212ENST00000600447 MMP3P08254 477 aa16.63■□□□□ 0.25
PPFIA4-212ENST00000600447 SUPT20HL2P0C7V6 817 aa16.63■□□□□ 0.25
PPFIA4-212ENST00000600447 CSF2RAP15509 400 aa16.63■□□□□ 0.25
PPFIA4-212ENST00000600447 RXRAP19793 462 aa16.63■□□□□ 0.25
PPFIA4-212ENST00000600447 SMAD3P84022 425 aaKnown RBP16.63■□□□□ 0.25
PPFIA4-212ENST00000600447 PTPN11Q06124 597 aaPredicted RBP16.63■□□□□ 0.25
PPFIA4-212ENST00000600447 ADCK5Q3MIX3 580 aa16.63■□□□□ 0.25
PPFIA4-212ENST00000600447 DHX32Q7L7V1 743 aaKnown RBP16.63■□□□□ 0.25
PPFIA4-212ENST00000600447 FCHSD1Q86WN1 690 aa16.63■□□□□ 0.25
PPFIA4-212ENST00000600447 IL31RAQ8NI17 732 aa16.63■□□□□ 0.25
PPFIA4-212ENST00000600447 HMGB1P09429 215 aaKnown RBP16.62■□□□□ 0.25
PPFIA4-212ENST00000600447 TGFB3P10600 412 aa16.62■□□□□ 0.25
PPFIA4-212ENST00000600447 LAMC2Q13753 1193 aa16.62■□□□□ 0.25
PPFIA4-212ENST00000600447 TMEM240Q5SV17 173 aa16.62■□□□□ 0.25
PPFIA4-212ENST00000600447 APOA5Q6Q788 366 aa16.62■□□□□ 0.25
PPFIA4-212ENST00000600447 SYNE3Q6ZMZ3 975 aa16.62■□□□□ 0.25
PPFIA4-212ENST00000600447 TMTC3Q6ZXV5 915 aa16.62■□□□□ 0.25
PPFIA4-212ENST00000600447 C16orf59Q7L2K0 433 aa16.62■□□□□ 0.25
PPFIA4-212ENST00000600447 MICU3Q86XE3 530 aa16.62■□□□□ 0.25
PPFIA4-212ENST00000600447 CMTR1Q8N1G2 835 aaKnown RBP16.62■□□□□ 0.25
PPFIA4-212ENST00000600447 KCNB2Q92953 911 aa16.62■□□□□ 0.25
PPFIA4-212ENST00000600447 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.62■□□□□ 0.257e-6■■□□□ 12.2
PPFIA4-212ENST00000600447 TRMT13Q9NUP7 481 aaKnown RBP16.62■□□□□ 0.25
PPFIA4-212ENST00000600447 MTMR10Q9NXD2 777 aa16.62■□□□□ 0.25
PPFIA4-212ENST00000600447 PIK3CDO00329 1044 aa16.61■□□□□ 0.25
PPFIA4-212ENST00000600447 STAM2O75886 525 aa16.61■□□□□ 0.25
PPFIA4-212ENST00000600447 CASTP20810 708 aaKnown RBP16.61■□□□□ 0.25
PPFIA4-212ENST00000600447 DGKDQ16760 1214 aa16.61■□□□□ 0.25
PPFIA4-212ENST00000600447 FAM47CQ5HY64 1035 aa16.61■□□□□ 0.25
PPFIA4-212ENST00000600447 PSRC1Q6PGN9 363 aaPredicted RBP16.61■□□□□ 0.25
PPFIA4-212ENST00000600447 RAB11FIP4Q86YS3 637 aa16.61■□□□□ 0.25
PPFIA4-212ENST00000600447 DHX37Q8IY37 1157 aaKnown RBP16.61■□□□□ 0.25
PPFIA4-212ENST00000600447 PPTC7Q8NI37 304 aa16.61■□□□□ 0.25
PPFIA4-212ENST00000600447 CUL5Q93034 780 aa16.61■□□□□ 0.25
PPFIA4-212ENST00000600447 IL23AQ9NPF7 189 aa16.61■□□□□ 0.25
PPFIA4-212ENST00000600447 UMODL1Q5DID0 1318 aa16.61■□□□□ 0.25
PPFIA4-212ENST00000600447 TRIP12Q14669 1992 aaPredicted RBP16.6■□□□□ 0.25
PPFIA4-212ENST00000600447 MEIS2O14770 477 aa16.6■□□□□ 0.25
PPFIA4-212ENST00000600447 RASIP1Q5U651 963 aa16.6■□□□□ 0.25
PPFIA4-212ENST00000600447 MYSM1Q5VVJ2 828 aa16.6■□□□□ 0.25
PPFIA4-212ENST00000600447 USP17L6PQ6QN14 398 aa16.6■□□□□ 0.25
PPFIA4-212ENST00000600447 SMARCC2Q8TAQ2 1214 aa16.6■□□□□ 0.25
PPFIA4-212ENST00000600447 TCEANC2Q96MN5 208 aa16.6■□□□□ 0.25
PPFIA4-212ENST00000600447 WNT8AQ9H1J5 351 aa16.6■□□□□ 0.25
PPFIA4-212ENST00000600447 RBM28Q9NW13 759 aaKnown RBP16.6■□□□□ 0.25
PPFIA4-212ENST00000600447 CDH23Q9H251 3354 aa16.6■□□□□ 0.25
PPFIA4-212ENST00000600447 TANC1Q9C0D5 1861 aa16.6■□□□□ 0.25
PPFIA4-212ENST00000600447 DOCK5Q9H7D0 1870 aa16.6■□□□□ 0.25
PPFIA4-212ENST00000600447 SCN5AQ14524 2016 aa16.6■□□□□ 0.25
PPFIA4-212ENST00000600447 ZBTB43O43298 467 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 REC8O95072 547 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 ACRP10323 421 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 CYP2C9P11712 490 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 HOXD8P13378 290 aaPredicted RBP16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 HSPA4P34932 840 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 CCL23P55773 120 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 MRPS9P82933 396 aaKnown RBP16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 GNPTABQ3T906 1256 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 CELF3Q5SZQ8 465 aaKnown RBP16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 ZNF697Q5TEC3 545 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 XRRA1Q6P2D8 792 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 ZNF365Q70YC5 407 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 SESTD1Q86VW0 696 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 CCDC82Q8N4S0 544 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 KAT2BQ92831 832 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 INPP4AQ96PE3 977 aaPredicted RBP16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 PSTPIP2Q9H939 334 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 BRPF3Q9ULD4 1205 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 CHD9Q3L8U1 2897 aa16.59■□□□□ 0.25
PPFIA4-212ENST00000600447 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.58■□□□□ 0.24
PPFIA4-212ENST00000600447 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.58■□□□□ 0.24
PPFIA4-212ENST00000600447 hCG_1642624A0A1W2PR95 340 aa16.58■□□□□ 0.24
PPFIA4-212ENST00000600447 GGPS1O95749 300 aa16.58■□□□□ 0.24
PPFIA4-212ENST00000600447 UBA1P22314 1058 aaKnown RBP16.58■□□□□ 0.24
PPFIA4-212ENST00000600447 ICAM3P32942 547 aa16.58■□□□□ 0.24
PPFIA4-212ENST00000600447 RCAN1P53805 252 aa16.58■□□□□ 0.24
PPFIA4-212ENST00000600447 SP2Q02086 613 aa16.58■□□□□ 0.24
PPFIA4-212ENST00000600447 RTN1Q16799 776 aa16.58■□□□□ 0.24
PPFIA4-212ENST00000600447 PCNX4Q63HM2 1172 aa16.58■□□□□ 0.24
PPFIA4-212ENST00000600447 PPP1R13LQ8WUF5 828 aa16.58■□□□□ 0.24
PPFIA4-212ENST00000600447 GPKOWQ92917 476 aaPredicted RBP eCLIP16.58■□□□□ 0.24
PPFIA4-212ENST00000600447 KATNAL1Q9BW62 490 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms