RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 SYTL5Q8TDW5 730 aaPredicted RBP17.11■□□□□ 0.33
VRK3-218ENST00000600031 DHX58Q96C10 678 aa17.11■□□□□ 0.33
VRK3-218ENST00000600031 UIMC1Q96RL1 719 aa17.11■□□□□ 0.33
VRK3-218ENST00000600031 TEX13BQ9BXU2 312 aa17.11■□□□□ 0.33
VRK3-218ENST00000600031 ASCC2Q9H1I8 757 aaPredicted RBP17.11■□□□□ 0.33
VRK3-218ENST00000600031 ACTN4O43707 911 aaKnown RBP17.11■□□□□ 0.33
VRK3-218ENST00000600031 STAT3P40763 770 aa17.11■□□□□ 0.33
VRK3-218ENST00000600031 IRX3P78415 501 aaPredicted RBP17.11■□□□□ 0.33
VRK3-218ENST00000600031 SNAPC2Q13487 334 aa17.11■□□□□ 0.33
VRK3-218ENST00000600031 PRR16Q569H4 304 aa17.11■□□□□ 0.33
VRK3-218ENST00000600031 CYP2W1Q8TAV3 490 aa17.11■□□□□ 0.33
VRK3-218ENST00000600031 LENG9Q96B70 501 aa17.11■□□□□ 0.33
VRK3-218ENST00000600031 BTBD7Q9P203 1132 aa17.11■□□□□ 0.33
VRK3-218ENST00000600031 FOXN1O15353 648 aa17.1■□□□□ 0.33
VRK3-218ENST00000600031 FXR2P51116 673 aaKnown RBP eCLIP17.1■□□□□ 0.33
VRK3-218ENST00000600031 Q4G0T1 1027 aa17.1■□□□□ 0.33
VRK3-218ENST00000600031 SLC30A10Q6XR72 485 aa17.1■□□□□ 0.33
VRK3-218ENST00000600031 IGSF22Q8N9C0 903 aa17.1■□□□□ 0.33
VRK3-218ENST00000600031 AK8Q96MA6 479 aa17.1■□□□□ 0.33
VRK3-218ENST00000600031 KCNMB3Q9NPA1 279 aa17.1■□□□□ 0.33
VRK3-218ENST00000600031 ZNF165P49910 485 aa17.09■□□□□ 0.33
VRK3-218ENST00000600031 MKRN3Q13064 507 aaKnown RBP17.09■□□□□ 0.33
VRK3-218ENST00000600031 NSMFQ6X4W1 530 aa17.09■□□□□ 0.33
VRK3-218ENST00000600031 RNF207Q6ZRF8 634 aa17.09■□□□□ 0.33
VRK3-218ENST00000600031 PLA2G4DQ86XP0 818 aa17.09■□□□□ 0.33
VRK3-218ENST00000600031 SAMD3Q8N6K7 520 aa17.09■□□□□ 0.33
VRK3-218ENST00000600031 CCSER1Q9C0I3 900 aa17.09■□□□□ 0.33
VRK3-218ENST00000600031 EHMT1Q9H9B1 1298 aa17.09■□□□□ 0.33
VRK3-218ENST00000600031 MAP3K20Q9NYL2 800 aaKnown RBP17.09■□□□□ 0.33
VRK3-218ENST00000600031 KIAA1468Q9P260 1216 aa17.09■□□□□ 0.33
VRK3-218ENST00000600031 PYCARDQ9ULZ3 195 aa17.09■□□□□ 0.33
VRK3-218ENST00000600031 RBBP6Q7Z6E9 1792 aaKnown RBP17.09■□□□□ 0.33
VRK3-218ENST00000600031 ZNF76P36508 570 aa17.09■□□□□ 0.33
VRK3-218ENST00000600031 HERVK_113P62684 666 aa17.09■□□□□ 0.33
VRK3-218ENST00000600031 MDM2Q00987 491 aaPredicted RBP17.09■□□□□ 0.33
VRK3-218ENST00000600031 KARSQ15046 597 aaKnown RBP17.09■□□□□ 0.33
VRK3-218ENST00000600031 E2F4Q16254 413 aa17.09■□□□□ 0.33
VRK3-218ENST00000600031 C17orf53Q8N3J3 647 aaPredicted RBP17.09■□□□□ 0.33
VRK3-218ENST00000600031 ZFP91Q96JP5 570 aaPredicted RBP17.09■□□□□ 0.33
VRK3-218ENST00000600031 PURBQ96QR8 312 aaKnown RBP17.09■□□□□ 0.33
VRK3-218ENST00000600031 A0A0G2JMZ2 1700 aa17.09■□□□□ 0.33
VRK3-218ENST00000600031 RPTORQ8N122 1335 aa17.08■□□□□ 0.33
VRK3-218ENST00000600031 IGLV3-22A0A075B6J6 115 aa17.08■□□□□ 0.33
VRK3-218ENST00000600031 A0A087WWV3 80 aa17.08■□□□□ 0.33
VRK3-218ENST00000600031 MARCH6O60337 910 aa17.08■□□□□ 0.33
VRK3-218ENST00000600031 TXLNAP40222 546 aa17.08■□□□□ 0.33
VRK3-218ENST00000600031 UBA7P41226 1012 aa17.08■□□□□ 0.33
VRK3-218ENST00000600031 ZNF75DP51815 510 aa17.08■□□□□ 0.33
VRK3-218ENST00000600031 PNOCQ13519 176 aa17.08■□□□□ 0.33
VRK3-218ENST00000600031 BAATQ14032 418 aaPredicted RBP17.08■□□□□ 0.33
VRK3-218ENST00000600031 MB21D1Q8N884 522 aa17.08■□□□□ 0.33
VRK3-218ENST00000600031 ETNPPLQ8TBG4 499 aa17.08■□□□□ 0.33
VRK3-218ENST00000600031 MS4A4AQ96JQ5 239 aa17.08■□□□□ 0.33
VRK3-218ENST00000600031 TAAR1Q96RJ0 339 aa17.08■□□□□ 0.33
VRK3-218ENST00000600031 POTEMA6NI47 508 aa17.08■□□□□ 0.32
VRK3-218ENST00000600031 SLFN14P0C7P3 912 aa17.08■□□□□ 0.32
VRK3-218ENST00000600031 TMEM266Q2M3C6 531 aa17.08■□□□□ 0.32
VRK3-218ENST00000600031 TKFCQ3LXA3 575 aa17.08■□□□□ 0.32
VRK3-218ENST00000600031 ELOA2Q8IYF1 753 aaPredicted RBP17.08■□□□□ 0.32
VRK3-218ENST00000600031 GRAMD1CQ8IYS0 662 aa17.08■□□□□ 0.32
VRK3-218ENST00000600031 IL31RAQ8NI17 732 aa17.08■□□□□ 0.32
VRK3-218ENST00000600031 MMTAG2Q9BU76 263 aaKnown RBP17.08■□□□□ 0.32
VRK3-218ENST00000600031 TRIM5Q9C035 493 aa17.08■□□□□ 0.32
VRK3-218ENST00000600031 PCDHA12Q9UN75 941 aa17.08■□□□□ 0.32
VRK3-218ENST00000600031 CNMDO75829 334 aa17.07■□□□□ 0.32
VRK3-218ENST00000600031 CDC25BP30305 580 aa17.07■□□□□ 0.32
VRK3-218ENST00000600031 PDIA5Q14554 519 aa17.07■□□□□ 0.32
VRK3-218ENST00000600031 CABP7Q86V35 215 aa17.07■□□□□ 0.32
VRK3-218ENST00000600031 IQUBQ8NA54 791 aa17.07■□□□□ 0.32
VRK3-218ENST00000600031 ACAD9Q9H845 621 aa17.07■□□□□ 0.32
VRK3-218ENST00000600031 LRWD1Q9UFC0 647 aa17.07■□□□□ 0.32
VRK3-218ENST00000600031 MSH4O15457 936 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 PRR29P0C7W0 189 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 OSBPP22059 807 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 PTGS1P23219 599 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 PABPC4Q13310 644 aaKnown RBP eCLIP17.06■□□□□ 0.32
VRK3-218ENST00000600031 DRC7Q8IY82 874 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 PLIN2Q99541 437 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 PAGR1Q9BTK6 254 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 SPATC1LQ9H0A9 340 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 A1CFQ9NQ94 594 aaKnown RBP17.06■□□□□ 0.32
VRK3-218ENST00000600031 DISC1Q9NRI5 854 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 TRPM7Q96QT4 1865 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 FRMPD4Q14CM0 1322 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 TBX3O15119 743 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 GTF2A2P52657 109 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 POSTNQ15063 836 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 ZRSR1Q15695 479 aaKnown RBP17.06■□□□□ 0.32
VRK3-218ENST00000600031 CEP55Q53EZ4 464 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 SPRYD7Q5W111 196 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 PDXDC2PQ6P474 469 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 SH3RF1Q7Z6J0 888 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 RIOX2Q8IUF8 465 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 SLFN12Q8IYM2 578 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 CEP57L1Q8IYX8 460 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 LRRC15Q8TF66 581 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 PAGE5Q96GU1 130 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 RAB34Q9BZG1 259 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 DNAJC25Q9H1X3 360 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 TXNRD2Q9NNW7 524 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms