RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 RNPC3Q96LT9 517 aaKnown RBP12.62□□□□□ -0.39
SIN3B-210ENST00000599880 ALDH8A1Q9H2A2 487 aaPredicted RBP12.62□□□□□ -0.39
SIN3B-210ENST00000599880 HIPK3Q9H422 1215 aa12.62□□□□□ -0.39
SIN3B-210ENST00000599880 DDX41Q9UJV9 622 aaKnown RBP12.62□□□□□ -0.39
SIN3B-210ENST00000599880 TRIP12Q14669 1992 aaPredicted RBP12.61□□□□□ -0.39
SIN3B-210ENST00000599880 GBF1Q92538 1859 aa12.61□□□□□ -0.39
SIN3B-210ENST00000599880 SCN5AQ14524 2016 aa12.61□□□□□ -0.39
SIN3B-210ENST00000599880 CDH23Q9H251 3354 aa12.61□□□□□ -0.39
SIN3B-210ENST00000599880 PIK3CDO00329 1044 aa12.61□□□□□ -0.39
SIN3B-210ENST00000599880 STAM2O75886 525 aa12.61□□□□□ -0.39
SIN3B-210ENST00000599880 MMP3P08254 477 aa12.61□□□□□ -0.39
SIN3B-210ENST00000599880 HMGB1P09429 215 aaKnown RBP12.61□□□□□ -0.39
SIN3B-210ENST00000599880 TGFB3P10600 412 aa12.61□□□□□ -0.39
SIN3B-210ENST00000599880 CCND2P30279 289 aa12.61□□□□□ -0.39
SIN3B-210ENST00000599880 HOXA13P31271 388 aaPredicted RBP12.61□□□□□ -0.39
SIN3B-210ENST00000599880 LY6KQ17RY6 165 aa12.61□□□□□ -0.39
SIN3B-210ENST00000599880 PSRC1Q6PGN9 363 aaPredicted RBP12.61□□□□□ -0.39
SIN3B-210ENST00000599880 NOC4LQ9BVI4 516 aaKnown RBP12.61□□□□□ -0.39
SIN3B-210ENST00000599880 PPP1R12CQ9BZL4 782 aa12.61□□□□□ -0.39
SIN3B-210ENST00000599880 MRVI1Q9Y6F6 885 aa12.61□□□□□ -0.39
SIN3B-210ENST00000599880 RGS20O76081 388 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 PLEKHA8P1O95397 391 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 NEFLP07196 543 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 HOXD8P13378 290 aaPredicted RBP12.6□□□□□ -0.39
SIN3B-210ENST00000599880 CSF2RAP15509 400 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 CASTP20810 708 aaKnown RBP12.6□□□□□ -0.39
SIN3B-210ENST00000599880 RCAN1P53805 252 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 EXOSC10Q01780 885 aaKnown RBP12.6□□□□□ -0.39
SIN3B-210ENST00000599880 LAMC2Q13753 1193 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 DGKDQ16760 1214 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 NBPF20Q3BBV1 942 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 APOA5Q6Q788 366 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 SYNE3Q6ZMZ3 975 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 TMTC3Q6ZXV5 915 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 DHX32Q7L7V1 743 aaKnown RBP12.6□□□□□ -0.39
SIN3B-210ENST00000599880 MICU3Q86XE3 530 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 TEX2Q8IWB9 1127 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 RASEFQ8IZ41 740 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 SRBD1Q8N5C6 995 aaKnown RBP12.6□□□□□ -0.39
SIN3B-210ENST00000599880 FANCBQ8NB91 859 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 IL31RAQ8NI17 732 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 PPTC7Q8NI37 304 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 AFG1LQ8WV93 481 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 KCNB2Q92953 911 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.6□□□□□ -0.39
SIN3B-210ENST00000599880 LRRC2Q9BYS8 371 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 TRPV6Q9H1D0 765 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
SIN3B-210ENST00000599880 MTMR10Q9NXD2 777 aa12.6□□□□□ -0.39
SIN3B-210ENST00000599880 TMEM265A0A087WTH1 108 aa12.59□□□□□ -0.39
SIN3B-210ENST00000599880 EPB41L2O43491 1005 aaKnown RBP12.59□□□□□ -0.39
SIN3B-210ENST00000599880 MYCLP12524 364 aaPredicted RBP12.59□□□□□ -0.39
SIN3B-210ENST00000599880 RXRAP19793 462 aa12.59□□□□□ -0.39
SIN3B-210ENST00000599880 CYP2C18P33260 490 aa12.59□□□□□ -0.39
SIN3B-210ENST00000599880 ADCK5Q3MIX3 580 aa12.59□□□□□ -0.39
SIN3B-210ENST00000599880 GNPTABQ3T906 1256 aa12.59□□□□□ -0.39
SIN3B-210ENST00000599880 TMEM240Q5SV17 173 aa12.59□□□□□ -0.39
SIN3B-210ENST00000599880 ZNF697Q5TEC3 545 aa12.59□□□□□ -0.39
SIN3B-210ENST00000599880 RASIP1Q5U651 963 aa12.59□□□□□ -0.39
SIN3B-210ENST00000599880 Q7L0L9 218 aa12.59□□□□□ -0.39
SIN3B-210ENST00000599880 SESTD1Q86VW0 696 aa12.59□□□□□ -0.39
SIN3B-210ENST00000599880 FCHSD1Q86WN1 690 aa12.59□□□□□ -0.39
SIN3B-210ENST00000599880 DHX37Q8IY37 1157 aaKnown RBP12.59□□□□□ -0.39
SIN3B-210ENST00000599880 CUL5Q93034 780 aa12.59□□□□□ -0.39
SIN3B-210ENST00000599880 KATNAL1Q9BW62 490 aa12.59□□□□□ -0.39
SIN3B-210ENST00000599880 IL23AQ9NPF7 189 aa12.59□□□□□ -0.39
SIN3B-210ENST00000599880 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.58□□□□□ -0.4
SIN3B-210ENST00000599880 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.58□□□□□ -0.4
SIN3B-210ENST00000599880 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 MEIS2O14770 477 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 REC8O95072 547 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 F2P00734 622 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 PFKMP08237 780 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 UBA1P22314 1058 aaKnown RBP12.58□□□□□ -0.4
SIN3B-210ENST00000599880 ICAM3P32942 547 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 HSPA4P34932 840 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 FAM47CQ5HY64 1035 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 MYSM1Q5VVJ2 828 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 XRRA1Q6P2D8 792 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 C16orf59Q7L2K0 433 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 SMARCC2Q8TAQ2 1214 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 PIBF1Q8WXW3 757 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 KAT2BQ92831 832 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 INPP4AQ96PE3 977 aaPredicted RBP12.58□□□□□ -0.4
SIN3B-210ENST00000599880 WNT8AQ9H1J5 351 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 MTIF3Q9H2K0 278 aaKnown RBP12.58□□□□□ -0.4
SIN3B-210ENST00000599880 TRMT13Q9NUP7 481 aaKnown RBP12.58□□□□□ -0.4
SIN3B-210ENST00000599880 STXBP5LQ9Y2K9 1186 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 UMODL1Q5DID0 1318 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 CNTNAP5Q8WYK1 1306 aa12.58□□□□□ -0.4
SIN3B-210ENST00000599880 KAT6AQ92794 2004 aa12.57□□□□□ -0.4
SIN3B-210ENST00000599880 hCG_1984214I3L0E3 225 aa12.57□□□□□ -0.4
SIN3B-210ENST00000599880 ZBTB43O43298 467 aa12.57□□□□□ -0.4
SIN3B-210ENST00000599880 PPFIA4O75335 1185 aa12.57□□□□□ -0.4
SIN3B-210ENST00000599880 MRPS9P82933 396 aaKnown RBP12.57□□□□□ -0.4
SIN3B-210ENST00000599880 CELF3Q5SZQ8 465 aaKnown RBP12.57□□□□□ -0.4
SIN3B-210ENST00000599880 PCNX4Q63HM2 1172 aa12.57□□□□□ -0.4
SIN3B-210ENST00000599880 USP17L6PQ6QN14 398 aa12.57□□□□□ -0.4
SIN3B-210ENST00000599880 RPUSD2Q8IZ73 545 aaKnown RBP12.57□□□□□ -0.4
SIN3B-210ENST00000599880 CMTR1Q8N1G2 835 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms