RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
SHKBP1-218ENST00000598907 STXBP3O00186 592 aa16.34■□□□□ 0.21
SHKBP1-218ENST00000598907 HIP1O00291 1037 aa16.34■□□□□ 0.21
SHKBP1-218ENST00000598907 MBTPS2O43462 519 aa16.34■□□□□ 0.21
SHKBP1-218ENST00000598907 BMP3P12645 472 aa16.34■□□□□ 0.21
SHKBP1-218ENST00000598907 LTBRP36941 435 aa16.34■□□□□ 0.21
SHKBP1-218ENST00000598907 DLX2Q07687 328 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-218ENST00000598907 IKBKEQ14164 716 aa16.34■□□□□ 0.21
SHKBP1-218ENST00000598907 SLFN13Q68D06 897 aa16.34■□□□□ 0.21
SHKBP1-218ENST00000598907 GDF6Q6KF10 455 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-218ENST00000598907 DHX38Q92620 1227 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-218ENST00000598907 CTAGE1Q96RT6 745 aa16.34■□□□□ 0.21
SHKBP1-218ENST00000598907 ATG2AQ2TAZ0 1938 aa16.34■□□□□ 0.21
SHKBP1-218ENST00000598907 NLRC5Q86WI3 1866 aa16.33■□□□□ 0.21
SHKBP1-218ENST00000598907 CXCL10P02778 98 aa16.33■□□□□ 0.2
SHKBP1-218ENST00000598907 STAT2P52630 851 aa16.33■□□□□ 0.2
SHKBP1-218ENST00000598907 COL19A1Q14993 1142 aa16.33■□□□□ 0.2
SHKBP1-218ENST00000598907 PPP2R5BQ15173 497 aa16.33■□□□□ 0.2
SHKBP1-218ENST00000598907 C8orf34Q49A92 452 aa16.33■□□□□ 0.2
SHKBP1-218ENST00000598907 ZMYM1Q5SVZ6 1142 aa16.33■□□□□ 0.2
SHKBP1-218ENST00000598907 ASCL5Q7RTU5 278 aa16.33■□□□□ 0.2
SHKBP1-218ENST00000598907 ARPP21Q9UBL0 812 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-218ENST00000598907 H0Y858 1186 aa16.32■□□□□ 0.2
SHKBP1-218ENST00000598907 H3BNC9 293 aa16.32■□□□□ 0.2
SHKBP1-218ENST00000598907 EFCAB14O75071 495 aa16.32■□□□□ 0.2
SHKBP1-218ENST00000598907 CKBP12277 381 aa16.32■□□□□ 0.2
SHKBP1-218ENST00000598907 ALDH5A1P51649 535 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-218ENST00000598907 NMIQ13287 307 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-218ENST00000598907 PKN1Q16512 942 aa16.32■□□□□ 0.2
SHKBP1-218ENST00000598907 TKFCQ3LXA3 575 aa16.32■□□□□ 0.2
SHKBP1-218ENST00000598907 ERMP1Q7Z2K6 904 aa16.32■□□□□ 0.2
SHKBP1-218ENST00000598907 CEP95Q96GE4 821 aa16.32■□□□□ 0.2
SHKBP1-218ENST00000598907 ALG13Q9NP73 1137 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-218ENST00000598907 TLR9Q9NR96 1032 aa16.32■□□□□ 0.2
SHKBP1-218ENST00000598907 KDM4AO75164 1064 aa16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 TBX10O75333 385 aa16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 PRDM1O75626 825 aa16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 AMHP03971 560 aa16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 MKRN4PQ13434 485 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 SMAD4Q13485 552 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 FBXO11Q86XK2 927 aa16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 GMCL1P1Q8NEA9 526 aa16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 MORC4Q8TE76 937 aa16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 APPBP2Q92624 585 aa16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 FAM227BQ96M60 508 aa16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 SAMD11Q96NU1 681 aa16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 YME1L1Q96TA2 773 aa16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 HELLSQ9NRZ9 838 aa16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 DIAPH3Q9NSV4 1193 aa16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 CCPG1Q9ULG6 757 aa16.31■□□□□ 0.2
SHKBP1-218ENST00000598907 MICAL3Q7RTP6 2002 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 IGKV6D-41A0A0C4DH26 115 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 A0A0D9SFI3 127 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 A6NJR5 290 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 MINDY4BA8MYZ0 360 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 KPNA6O60684 536 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 RGS20O76081 388 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 FDX1P10109 184 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 ZXDAP98168 799 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 BAATQ14032 418 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 TMEM192Q8IY95 271 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 SP7Q8TDD2 431 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 OSBP2Q969R2 916 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 ESYT1Q9BSJ8 1104 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 IL25Q9H293 177 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 IGFLR1Q9H665 355 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 ADD3Q9UEY8 706 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 CACNA1HO95180 2353 aa16.3■□□□□ 0.2
SHKBP1-218ENST00000598907 MYO15AQ9UKN7 3530 aa16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 RBM47A0AV96 593 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 LINC01565O15544 149 aa16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 SGSM2O43147 1006 aa16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 UPP2O95045 317 aa16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 PARNO95453 639 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 TTLL1O95922 423 aa16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 GTF2F1P35269 517 aaKnown RBP eCLIP16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 ID4P47928 161 aa16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 HTRA4P83105 476 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 PDE4BQ07343 736 aa16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 PDE4DQ08499 809 aa16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 HYAL1Q12794 435 aa16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 MCMDC2Q4G0Z9 681 aa16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 CWC27Q6UX04 472 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 KCTD1Q719H9 257 aa16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 RASGRP2Q7LDG7 609 aa16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 FAM160B2Q86V87 743 aa16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 RUFY2Q8WXA3 655 aa16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 SEC62Q99442 399 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 PUS7LQ9H0K6 701 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-218ENST00000598907 PTPDC1A2A3K4 754 aa16.28■□□□□ 0.2
SHKBP1-218ENST00000598907 PRR23AA6NEV1 266 aa16.28■□□□□ 0.2
SHKBP1-218ENST00000598907 LGR5O75473 907 aa16.28■□□□□ 0.2
SHKBP1-218ENST00000598907 CTNNB1P35222 781 aa16.28■□□□□ 0.2
SHKBP1-218ENST00000598907 SLC1A4P43007 532 aa16.28■□□□□ 0.2
SHKBP1-218ENST00000598907 MBTPS1Q14703 1052 aa16.28■□□□□ 0.2
SHKBP1-218ENST00000598907 ZNF618Q5T7W0 954 aa16.28■□□□□ 0.2
SHKBP1-218ENST00000598907 CASC1Q6TDU7 716 aa16.28■□□□□ 0.2
SHKBP1-218ENST00000598907 SLC30A10Q6XR72 485 aa16.28■□□□□ 0.2
SHKBP1-218ENST00000598907 CHURC1Q8WUH1 139 aa16.28■□□□□ 0.2
SHKBP1-218ENST00000598907 IRF2BPLQ9H1B7 796 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms