RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 MYCLP12524 364 aaPredicted RBP23.26■■□□□ 1.31
PNKP-211ENST00000598020 ADCYAP1R1P41586 468 aa23.26■■□□□ 1.31
PNKP-211ENST00000598020 MRPS9P82933 396 aaKnown RBP23.26■■□□□ 1.31
PNKP-211ENST00000598020 TNFAIP2Q03169 654 aa23.26■■□□□ 1.31
PNKP-211ENST00000598020 ANKLE1Q8NAG6 615 aa23.26■■□□□ 1.31
PNKP-211ENST00000598020 TMEM260Q9NX78 707 aa23.26■■□□□ 1.31
PNKP-211ENST00000598020 GNEQ9Y223 722 aaKnown RBP23.26■■□□□ 1.31
PNKP-211ENST00000598020 Q9Y3F1 56 aa23.26■■□□□ 1.31
PNKP-211ENST00000598020 ADCY6O43306 1168 aa23.25■■□□□ 1.31
PNKP-211ENST00000598020 RGS20O76081 388 aa23.25■■□□□ 1.31
PNKP-211ENST00000598020 TFRCP02786 760 aaKnown RBP23.25■■□□□ 1.31
PNKP-211ENST00000598020 SMPD1P17405 629 aa23.25■■□□□ 1.31
PNKP-211ENST00000598020 EN2P19622 333 aaPredicted RBP23.25■■□□□ 1.31
PNKP-211ENST00000598020 SREBF1P36956 1147 aa23.25■■□□□ 1.31
PNKP-211ENST00000598020 SOX10P56693 466 aa23.25■■□□□ 1.31
PNKP-211ENST00000598020 NKX3-2P78367 333 aa23.25■■□□□ 1.31
PNKP-211ENST00000598020 CUL4AQ13619 759 aa23.25■■□□□ 1.31
PNKP-211ENST00000598020 DUSP28Q4G0W2 176 aa23.25■■□□□ 1.31
PNKP-211ENST00000598020 JAKMIP3Q5VZ66 844 aa23.25■■□□□ 1.31
PNKP-211ENST00000598020 BLIDQ8IZY5 108 aa23.25■■□□□ 1.31
PNKP-211ENST00000598020 INPP4AQ96PE3 977 aaPredicted RBP23.25■■□□□ 1.31
PNKP-211ENST00000598020 WDR11Q9BZH6 1224 aa23.25■■□□□ 1.31
PNKP-211ENST00000598020 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.24■■□□□ 1.31
PNKP-211ENST00000598020 NKRFO15226 690 aaKnown RBP eCLIP23.24■■□□□ 1.31
PNKP-211ENST00000598020 TTLL4Q14679 1199 aa23.24■■□□□ 1.31
PNKP-211ENST00000598020 CCDC62Q6P9F0 684 aa23.24■■□□□ 1.31
PNKP-211ENST00000598020 KCNV1Q6PIU1 500 aa23.24■■□□□ 1.31
PNKP-211ENST00000598020 CRYGNQ8WXF5 182 aa23.24■■□□□ 1.31
PNKP-211ENST00000598020 UPF3AQ9H1J1 476 aaKnown RBP23.24■■□□□ 1.31
PNKP-211ENST00000598020 KCNJ14Q9UNX9 436 aa23.24■■□□□ 1.31
PNKP-211ENST00000598020 ICAM3P32942 547 aa23.23■■□□□ 1.31
PNKP-211ENST00000598020 ANO1Q5XXA6 986 aa23.23■■□□□ 1.31
PNKP-211ENST00000598020 SEPT14Q6ZU15 432 aa23.23■■□□□ 1.31
PNKP-211ENST00000598020 ARRDC4Q8NCT1 418 aa23.23■■□□□ 1.31
PNKP-211ENST00000598020 XPNPEP3Q9NQH7 507 aa23.23■■□□□ 1.31
PNKP-211ENST00000598020 GJB4Q9NTQ9 266 aa23.23■■□□□ 1.31
PNKP-211ENST00000598020 ADAMTS4O75173 837 aa23.22■■□□□ 1.31
PNKP-211ENST00000598020 CYP3A4P08684 503 aa23.22■■□□□ 1.31
PNKP-211ENST00000598020 TGFB3P10600 412 aa23.22■■□□□ 1.31
PNKP-211ENST00000598020 MNX1P50219 401 aaPredicted RBP23.22■■□□□ 1.31
PNKP-211ENST00000598020 GJA9P57773 515 aa23.22■■□□□ 1.31
PNKP-211ENST00000598020 GNPTABQ3T906 1256 aa23.22■■□□□ 1.31
PNKP-211ENST00000598020 RASGRP4Q8TDF6 673 aa23.22■■□□□ 1.31
PNKP-211ENST00000598020 PGBD1Q96JS3 809 aa23.22■■□□□ 1.31
PNKP-211ENST00000598020 DDX41Q9UJV9 622 aaKnown RBP23.22■■□□□ 1.31
PNKP-211ENST00000598020 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.22■■□□□ 1.31
PNKP-211ENST00000598020 UBIAD1Q9Y5Z9 338 aa23.22■■□□□ 1.31
PNKP-211ENST00000598020 K7ELQ4 463 aaPredicted RBP23.21■■□□□ 1.31
PNKP-211ENST00000598020 MMP1P03956 469 aa23.21■■□□□ 1.31
PNKP-211ENST00000598020 TXNP10599 105 aaKnown RBP23.21■■□□□ 1.31
PNKP-211ENST00000598020 ARHGAP4P98171 946 aa23.21■■□□□ 1.31
PNKP-211ENST00000598020 TRIM29Q14134 588 aa23.21■■□□□ 1.31
PNKP-211ENST00000598020 KRT40Q6A162 431 aa23.21■■□□□ 1.31
PNKP-211ENST00000598020 UBE2Q1Q7Z7E8 422 aa23.21■■□□□ 1.31
PNKP-211ENST00000598020 FAM184AQ8NB25 1140 aa23.21■■□□□ 1.31
PNKP-211ENST00000598020 LENG1Q96BZ8 264 aaPredicted RBP23.21■■□□□ 1.31
PNKP-211ENST00000598020 GPRASP2Q96D09 838 aa23.21■■□□□ 1.31
PNKP-211ENST00000598020 KIF3AQ9Y496 699 aa23.21■■□□□ 1.31
PNKP-211ENST00000598020 SYNRGQ9UMZ2 1314 aa23.21■■□□□ 1.31
PNKP-211ENST00000598020 MYH7BA7E2Y1 1941 aa23.21■■□□□ 1.31
PNKP-211ENST00000598020 BRCA2P51587 3418 aa23.21■■□□□ 1.31
PNKP-211ENST00000598020 SPATA31C2B4DYI2 1134 aa23.2■■□□□ 1.3
PNKP-211ENST00000598020 ARIH2O95376 493 aa23.2■■□□□ 1.3
PNKP-211ENST00000598020 CST5P28325 142 aaPredicted RBP23.2■■□□□ 1.3
PNKP-211ENST00000598020 RGS19P49795 217 aa23.2■■□□□ 1.3
PNKP-211ENST00000598020 LRRC41Q15345 812 aa23.2■■□□□ 1.3
PNKP-211ENST00000598020 TMEM63BQ5T3F8 832 aa23.2■■□□□ 1.3
PNKP-211ENST00000598020 NLRX1Q86UT6 975 aa23.2■■□□□ 1.3
PNKP-211ENST00000598020 KLHDC9Q8NEP7 349 aa23.2■■□□□ 1.3
PNKP-211ENST00000598020 C8orf76Q96K31 380 aa23.2■■□□□ 1.3
PNKP-211ENST00000598020 SPC25Q9HBM1 224 aa23.2■■□□□ 1.3
PNKP-211ENST00000598020 RTEL1Q9NZ71 1219 aa23.2■■□□□ 1.3
PNKP-211ENST00000598020 MRVI1Q9Y6F6 885 aa23.2■■□□□ 1.3
PNKP-211ENST00000598020 DNM1LO00429 736 aa23.19■■□□□ 1.3
PNKP-211ENST00000598020 MAFGO15525 162 aa23.19■■□□□ 1.3
PNKP-211ENST00000598020 FIBPO43427 364 aa23.19■■□□□ 1.3
PNKP-211ENST00000598020 PGK1P00558 417 aa23.19■■□□□ 1.3
PNKP-211ENST00000598020 ITGB5P18084 799 aa23.19■■□□□ 1.3
PNKP-211ENST00000598020 USP11P51784 963 aa23.19■■□□□ 1.3
PNKP-211ENST00000598020 KRT25Q7Z3Z0 450 aa23.19■■□□□ 1.3
PNKP-211ENST00000598020 RNF180Q86T96 592 aa23.19■■□□□ 1.3
PNKP-211ENST00000598020 TLK2Q86UE8 772 aa23.19■■□□□ 1.3
PNKP-211ENST00000598020 FBXO18Q8NFZ0 1043 aa23.19■■□□□ 1.3
PNKP-211ENST00000598020 INTS4Q96HW7 963 aaKnown RBP23.19■■□□□ 1.3
PNKP-211ENST00000598020 ZFP91Q96JP5 570 aaPredicted RBP23.19■■□□□ 1.3
PNKP-211ENST00000598020 CDHR1Q96JP9 859 aa23.19■■□□□ 1.3
PNKP-211ENST00000598020 BRMS1Q9HCU9 246 aa23.19■■□□□ 1.3
PNKP-211ENST00000598020 JADE2Q9NQC1 790 aa23.19■■□□□ 1.3
PNKP-211ENST00000598020 CTAGE5O15320 804 aa23.18■■□□□ 1.3
PNKP-211ENST00000598020 DYNC1LI2O43237 492 aaPredicted RBP23.18■■□□□ 1.3
PNKP-211ENST00000598020 CIITAP33076 1130 aa23.18■■□□□ 1.3
PNKP-211ENST00000598020 KRT2P35908 639 aa23.18■■□□□ 1.3
PNKP-211ENST00000598020 SEMA3FQ13275 785 aa23.18■■□□□ 1.3
PNKP-211ENST00000598020 CEP55Q53EZ4 464 aa23.18■■□□□ 1.3
PNKP-211ENST00000598020 CCSAPQ6IQ19 270 aaPredicted RBP23.18■■□□□ 1.3
PNKP-211ENST00000598020 NIPA1Q7RTP0 329 aa23.18■■□□□ 1.3
PNKP-211ENST00000598020 TNFRSF25Q93038 417 aa23.18■■□□□ 1.3
PNKP-211ENST00000598020 EMID1Q96A84 441 aaPredicted RBP23.18■■□□□ 1.3
PNKP-211ENST00000598020 MXRA8Q9BRK3 442 aa23.18■■□□□ 1.3
PNKP-211ENST00000598020 TSEN34Q9BSV6 310 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms