RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 LY6KQ17RY6 165 aa24.27■■□□□ 1.48
PNKP-209ENST00000596726 TYW1BQ6NUM6 668 aa24.27■■□□□ 1.48
PNKP-209ENST00000596726 CXCL17Q6UXB2 119 aa24.27■■□□□ 1.48
PNKP-209ENST00000596726 CHRDL2Q6WN34 429 aa24.27■■□□□ 1.48
PNKP-209ENST00000596726 ANKRD33Q7Z3H0 272 aa24.27■■□□□ 1.48
PNKP-209ENST00000596726 GDF15Q99988 308 aa24.27■■□□□ 1.48
PNKP-209ENST00000596726 DDX41Q9UJV9 622 aaKnown RBP24.27■■□□□ 1.48
PNKP-209ENST00000596726 A6NJR5 290 aa24.26■■□□□ 1.47
PNKP-209ENST00000596726 hCG_1984214I3L0E3 225 aa24.26■■□□□ 1.47
PNKP-209ENST00000596726 CPT1AP50416 773 aa24.26■■□□□ 1.47
PNKP-209ENST00000596726 PPP1R18Q6NYC8 613 aa24.26■■□□□ 1.47
PNKP-209ENST00000596726 ZNF713Q8N859 430 aaPredicted RBP24.26■■□□□ 1.47
PNKP-209ENST00000596726 ZNF274Q96GC6 653 aaPredicted RBP24.26■■□□□ 1.47
PNKP-209ENST00000596726 TOX2Q96NM4 488 aa24.26■■□□□ 1.47
PNKP-209ENST00000596726 PDRG1Q9NUG6 133 aa24.26■■□□□ 1.47
PNKP-209ENST00000596726 LTBP2Q14767 1821 aa24.26■■□□□ 1.47
PNKP-209ENST00000596726 A0A0U1RQG5 324 aaPredicted RBP24.25■■□□□ 1.47
PNKP-209ENST00000596726 STXBP3O00186 592 aa24.25■■□□□ 1.47
PNKP-209ENST00000596726 MRPS9P82933 396 aaKnown RBP24.25■■□□□ 1.47
PNKP-209ENST00000596726 ARHGAP1Q07960 439 aa24.25■■□□□ 1.47
PNKP-209ENST00000596726 TEX2Q8IWB9 1127 aa24.25■■□□□ 1.47
PNKP-209ENST00000596726 SLC43A3Q8NBI5 491 aa24.25■■□□□ 1.47
PNKP-209ENST00000596726 ALDH8A1Q9H2A2 487 aaPredicted RBP24.25■■□□□ 1.47
PNKP-209ENST00000596726 PDLIM7Q9NR12 457 aa24.25■■□□□ 1.47
PNKP-209ENST00000596726 BARHL2Q9NY43 387 aa24.25■■□□□ 1.47
PNKP-209ENST00000596726 MRVI1Q9Y6F6 885 aa24.25■■□□□ 1.47
PNKP-209ENST00000596726 RANBP2P49792 3224 aaKnown RBP24.25■■□□□ 1.47
PNKP-209ENST00000596726 SCN10AQ9Y5Y9 1956 aa24.24■■□□□ 1.47
PNKP-209ENST00000596726 ARVCFO00192 962 aa24.24■■□□□ 1.47
PNKP-209ENST00000596726 PRPF3O43395 683 aaKnown RBP24.24■■□□□ 1.47
PNKP-209ENST00000596726 STAM2O75886 525 aa24.24■■□□□ 1.47
PNKP-209ENST00000596726 GH1P01241 217 aa24.24■■□□□ 1.47
PNKP-209ENST00000596726 NAPAP54920 295 aa24.24■■□□□ 1.47
PNKP-209ENST00000596726 UBE2SQ16763 222 aa24.24■■□□□ 1.47
PNKP-209ENST00000596726 PFKFB3Q16875 520 aaPredicted RBP24.24■■□□□ 1.47
PNKP-209ENST00000596726 KCNV1Q6PIU1 500 aa24.24■■□□□ 1.47
PNKP-209ENST00000596726 VTI1AQ96AJ9 217 aa24.24■■□□□ 1.47
PNKP-209ENST00000596726 POLR3EQ9NVU0 708 aa24.24■■□□□ 1.47
PNKP-209ENST00000596726 RBM27Q9P2N5 1060 aaKnown RBP24.24■■□□□ 1.47
PNKP-209ENST00000596726 GRIN2DO15399 1336 aa24.24■■□□□ 1.47
PNKP-209ENST00000596726 PQBP1O60828 265 aaKnown RBP24.23■■□□□ 1.47
PNKP-209ENST00000596726 IFNAR1P17181 557 aa24.23■■□□□ 1.47
PNKP-209ENST00000596726 BMP8BP34820 402 aa24.23■■□□□ 1.47
PNKP-209ENST00000596726 MAGEA10P43363 369 aaPredicted RBP24.23■■□□□ 1.47
PNKP-209ENST00000596726 CCT2P78371 535 aaKnown RBP24.23■■□□□ 1.47
PNKP-209ENST00000596726 PURAQ00577 322 aaKnown RBP24.23■■□□□ 1.47
PNKP-209ENST00000596726 PKN1Q16512 942 aa24.23■■□□□ 1.47
PNKP-209ENST00000596726 C8orf34Q49A92 452 aa24.23■■□□□ 1.47
PNKP-209ENST00000596726 HABP4Q5JVS0 413 aaKnown RBP24.23■■□□□ 1.47
PNKP-209ENST00000596726 XRRA1Q6P2D8 792 aa24.23■■□□□ 1.47
PNKP-209ENST00000596726 EMID1Q96A84 441 aaPredicted RBP24.23■■□□□ 1.47
PNKP-209ENST00000596726 ZFP91Q96JP5 570 aaPredicted RBP24.23■■□□□ 1.47
PNKP-209ENST00000596726 NCOA5Q9HCD5 579 aaKnown RBP24.23■■□□□ 1.47
PNKP-209ENST00000596726 RIC8AQ9NPQ8 531 aa24.23■■□□□ 1.47
PNKP-209ENST00000596726 PCDH10Q9P2E7 1040 aa24.23■■□□□ 1.47
PNKP-209ENST00000596726 MROH7Q68CQ1 1323 aa24.22■■□□□ 1.47
PNKP-209ENST00000596726 KPNA6O60684 536 aa24.22■■□□□ 1.47
PNKP-209ENST00000596726 CLTBP09497 229 aa24.22■■□□□ 1.47
PNKP-209ENST00000596726 TGFB3P10600 412 aa24.22■■□□□ 1.47
PNKP-209ENST00000596726 SCG2P13521 617 aa24.22■■□□□ 1.47
PNKP-209ENST00000596726 FAAP100Q0VG06 881 aa24.22■■□□□ 1.47
PNKP-209ENST00000596726 BRDTQ58F21 947 aaPredicted RBP24.22■■□□□ 1.47
PNKP-209ENST00000596726 PCNX4Q63HM2 1172 aa24.22■■□□□ 1.47
PNKP-209ENST00000596726 SH3RF1Q7Z6J0 888 aa24.22■■□□□ 1.47
PNKP-209ENST00000596726 INPP4AQ96PE3 977 aaPredicted RBP24.22■■□□□ 1.47
PNKP-209ENST00000596726 LARP6Q9BRS8 491 aaKnown RBP24.22■■□□□ 1.47
PNKP-209ENST00000596726 RNF26Q9BY78 433 aaPredicted RBP24.22■■□□□ 1.47
PNKP-209ENST00000596726 SEZ6LQ9BYH1 1024 aa24.22■■□□□ 1.47
PNKP-209ENST00000596726 TRIM43BA6NCK2 446 aa24.21■■□□□ 1.47
PNKP-209ENST00000596726 ICAM3P32942 547 aa24.21■■□□□ 1.47
PNKP-209ENST00000596726 ITGA7Q13683 1181 aa24.21■■□□□ 1.47
PNKP-209ENST00000596726 AFG1LQ8WV93 481 aa24.21■■□□□ 1.47
PNKP-209ENST00000596726 PHKBQ93100 1093 aa24.21■■□□□ 1.47
PNKP-209ENST00000596726 TRIM43Q96BQ3 446 aaPredicted RBP24.21■■□□□ 1.47
PNKP-209ENST00000596726 PRKAG2Q9UGJ0 569 aa24.21■■□□□ 1.47
PNKP-209ENST00000596726 PCDHA6Q9UN73 950 aa24.21■■□□□ 1.47
PNKP-209ENST00000596726 PCDHA8Q9Y5H6 950 aa24.21■■□□□ 1.47
PNKP-209ENST00000596726 TRIOBPQ9H2D6 2365 aa24.21■■□□□ 1.47
PNKP-209ENST00000596726 SMCO2A6NFE2 343 aa24.2■■□□□ 1.46
PNKP-209ENST00000596726 DCDC2CA8MYV0 355 aa24.2■■□□□ 1.46
PNKP-209ENST00000596726 KIAA0355O15063 1070 aa24.2■■□□□ 1.46
PNKP-209ENST00000596726 MYL3P08590 195 aa24.2■■□□□ 1.46
PNKP-209ENST00000596726 SP2Q02086 613 aa24.2■■□□□ 1.46
PNKP-209ENST00000596726 LAMC2Q13753 1193 aa24.2■■□□□ 1.46
PNKP-209ENST00000596726 FAM126BQ8IXS8 530 aa24.2■■□□□ 1.46
PNKP-209ENST00000596726 MTG1Q9BT17 334 aaPredicted RBP24.2■■□□□ 1.46
PNKP-209ENST00000596726 GLT8D2Q9H1C3 349 aa24.2■■□□□ 1.46
PNKP-209ENST00000596726 PRDM5Q9NQX1 630 aaPredicted RBP24.2■■□□□ 1.46
PNKP-209ENST00000596726 SPDYE3A6NKU9 549 aa24.19■■□□□ 1.46
PNKP-209ENST00000596726 SPATA31C2B4DYI2 1134 aa24.19■■□□□ 1.46
PNKP-209ENST00000596726 MMP3P08254 477 aa24.19■■□□□ 1.46
PNKP-209ENST00000596726 ADCY7P51828 1080 aa24.19■■□□□ 1.46
PNKP-209ENST00000596726 PSMC6P62333 389 aa24.19■■□□□ 1.46
PNKP-209ENST00000596726 SEMA3FQ13275 785 aa24.19■■□□□ 1.46
PNKP-209ENST00000596726 GNPTABQ3T906 1256 aa24.19■■□□□ 1.46
PNKP-209ENST00000596726 CELF3Q5SZQ8 465 aaKnown RBP24.19■■□□□ 1.46
PNKP-209ENST00000596726 MYSM1Q5VVJ2 828 aa24.19■■□□□ 1.46
PNKP-209ENST00000596726 RTEL1Q9NZ71 1219 aa24.19■■□□□ 1.46
PNKP-209ENST00000596726 DOCK5Q9H7D0 1870 aa24.19■■□□□ 1.46
PNKP-209ENST00000596726 ESYT2A0FGR8 921 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms