RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 P2RX7Q99572 595 aaKnown RBP25.3■■□□□ 1.64
SRRM1-222ENST00000596378 SEC31AO94979 1220 aaKnown RBP25.29■■□□□ 1.64
SRRM1-222ENST00000596378 SSBP05455 408 aaKnown RBP eCLIP25.29■■□□□ 1.64
SRRM1-222ENST00000596378 DCAF4Q8WV16 495 aa25.29■■□□□ 1.64
SRRM1-222ENST00000596378 CTAGE9A4FU28 777 aa25.29■■□□□ 1.64
SRRM1-222ENST00000596378 TATDN1Q6P1N9 297 aa25.29■■□□□ 1.64
SRRM1-222ENST00000596378 ANO3Q9BYT9 981 aa25.29■■□□□ 1.64
SRRM1-222ENST00000596378 GUCA1BQ9UMX6 200 aa25.29■■□□□ 1.64
SRRM1-222ENST00000596378 E9PMD0 336 aa25.28■■□□□ 1.64
SRRM1-222ENST00000596378 HERVK_113P62684 666 aa25.28■■□□□ 1.64
SRRM1-222ENST00000596378 TSR1Q2NL82 804 aaKnown RBP25.28■■□□□ 1.64
SRRM1-222ENST00000596378 FAM53CQ9NYF3 392 aa25.28■■□□□ 1.64
SRRM1-222ENST00000596378 F5H6K3 240 aa25.28■■□□□ 1.64
SRRM1-222ENST00000596378 HMGB2P26583 209 aaKnown RBP25.28■■□□□ 1.64
SRRM1-222ENST00000596378 STAT3P40763 770 aa25.28■■□□□ 1.64
SRRM1-222ENST00000596378 KLRC3Q07444 240 aa25.28■■□□□ 1.64
SRRM1-222ENST00000596378 USH1GQ495M9 461 aa25.28■■□□□ 1.64
SRRM1-222ENST00000596378 MRIQ9BWK5 157 aa25.28■■□□□ 1.64
SRRM1-222ENST00000596378 CDC23Q9UJX2 597 aa25.28■■□□□ 1.64
SRRM1-222ENST00000596378 FHOD1Q9Y613 1164 aa25.28■■□□□ 1.64
SRRM1-222ENST00000596378 GCFC2P16383 781 aaKnown RBP25.27■■□□□ 1.64
SRRM1-222ENST00000596378 EHHADHQ08426 723 aa25.27■■□□□ 1.64
SRRM1-222ENST00000596378 ABCB5Q2M3G0 1257 aa25.27■■□□□ 1.64
SRRM1-222ENST00000596378 KRT222Q8N1A0 295 aa25.27■■□□□ 1.64
SRRM1-222ENST00000596378 GUF1Q8N442 669 aaKnown RBP25.27■■□□□ 1.64
SRRM1-222ENST00000596378 GOLGA1Q92805 767 aa25.27■■□□□ 1.64
SRRM1-222ENST00000596378 DNAJC19Q96DA6 116 aa25.27■■□□□ 1.64
SRRM1-222ENST00000596378 FGFBP2Q9BYJ0 223 aa25.27■■□□□ 1.64
SRRM1-222ENST00000596378 GTPBP4Q9BZE4 634 aaKnown RBP25.27■■□□□ 1.64
SRRM1-222ENST00000596378 ARGLU1Q9NWB6 273 aaPredicted RBP25.27■■□□□ 1.64
SRRM1-222ENST00000596378 MEIS2O14770 477 aa25.26■■□□□ 1.63
SRRM1-222ENST00000596378 CACNB1Q02641 598 aaPredicted RBP25.26■■□□□ 1.63
SRRM1-222ENST00000596378 RRP1BQ14684 758 aaKnown RBP25.26■■□□□ 1.63
SRRM1-222ENST00000596378 MEA1Q16626 185 aa25.26■■□□□ 1.63
SRRM1-222ENST00000596378 STYK1Q6J9G0 422 aa25.26■■□□□ 1.63
SRRM1-222ENST00000596378 TBC1D7Q9P0N9 293 aa25.26■■□□□ 1.63
SRRM1-222ENST00000596378 KIAA1024Q9UPX6 916 aa25.26■■□□□ 1.63
SRRM1-222ENST00000596378 POTEB3A0JP26 581 aa25.26■■□□□ 1.63
SRRM1-222ENST00000596378 POTECB2RU33 542 aa25.26■■□□□ 1.63
SRRM1-222ENST00000596378 CHMP4BP1P59074 171 aa25.26■■□□□ 1.63
SRRM1-222ENST00000596378 HDLBPQ00341 1268 aaKnown RBP25.26■■□□□ 1.63
SRRM1-222ENST00000596378 COASYQ13057 564 aa25.26■■□□□ 1.63
SRRM1-222ENST00000596378 IKQ13123 557 aaPredicted RBP25.26■■□□□ 1.63
SRRM1-222ENST00000596378 POTEBQ6S5H4 581 aa25.26■■□□□ 1.63
SRRM1-222ENST00000596378 TMEM179Q6ZVK1 233 aa25.26■■□□□ 1.63
SRRM1-222ENST00000596378 NAPGQ99747 312 aaPredicted RBP25.26■■□□□ 1.63
SRRM1-222ENST00000596378 ST7Q9NRC1 585 aa25.26■■□□□ 1.63
SRRM1-222ENST00000596378 SERPINA10Q9UK55 444 aa25.26■■□□□ 1.63
SRRM1-222ENST00000596378 NPHP3-ACAD11A0A0J9YXS1 232 aa25.25■■□□□ 1.63
SRRM1-222ENST00000596378 EPHB6O15197 1021 aa25.25■■□□□ 1.63
SRRM1-222ENST00000596378 NDUFB10O96000 172 aa25.25■■□□□ 1.63
SRRM1-222ENST00000596378 FKBP1AP62942 108 aaKnown RBP25.25■■□□□ 1.63
SRRM1-222ENST00000596378 FKBP15Q5T1M5 1219 aa25.25■■□□□ 1.63
SRRM1-222ENST00000596378 TMCO3Q6UWJ1 677 aa25.25■■□□□ 1.63
SRRM1-222ENST00000596378 SRGAP1Q7Z6B7 1085 aa25.25■■□□□ 1.63
SRRM1-222ENST00000596378 GPIHBP1Q8IV16 184 aa25.25■■□□□ 1.63
SRRM1-222ENST00000596378 GPR161Q8N6U8 529 aaKnown RBP25.25■■□□□ 1.63
SRRM1-222ENST00000596378 ERGIC2Q96RQ1 377 aa25.25■■□□□ 1.63
SRRM1-222ENST00000596378 ZMYND15Q9H091 742 aa25.25■■□□□ 1.63
SRRM1-222ENST00000596378 RAD51AP2Q09MP3 1159 aa25.25■■□□□ 1.63
SRRM1-222ENST00000596378 PRMT6Q96LA8 375 aaPredicted RBP25.25■■□□□ 1.63
SRRM1-222ENST00000596378 NUP58Q9BVL2 599 aa25.25■■□□□ 1.63
SRRM1-222ENST00000596378 PARD6BQ9BYG5 372 aa25.25■■□□□ 1.63
SRRM1-222ENST00000596378 ZRANB2O95218 330 aaKnown RBP eCLIP25.24■■□□□ 1.632e-15■□□□□ 10.6
SRRM1-222ENST00000596378 GH2P01242 217 aa25.24■■□□□ 1.63
SRRM1-222ENST00000596378 ZBED6P86452 979 aa25.24■■□□□ 1.63
SRRM1-222ENST00000596378 VWA3BQ502W6 1294 aa25.24■■□□□ 1.63
SRRM1-222ENST00000596378 LRRC55Q6ZSA7 311 aa25.24■■□□□ 1.63
SRRM1-222ENST00000596378 NDST4Q9H3R1 872 aa25.24■■□□□ 1.63
SRRM1-222ENST00000596378 NHEJ1Q9H9Q4 299 aaPredicted RBP25.24■■□□□ 1.63
SRRM1-222ENST00000596378 KCNMB3Q9NPA1 279 aa25.24■■□□□ 1.63
SRRM1-222ENST00000596378 PNMA6AP0CW24 399 aaPredicted RBP25.24■■□□□ 1.63
SRRM1-222ENST00000596378 RABGGTAQ92696 567 aa25.24■■□□□ 1.63
SRRM1-222ENST00000596378 FAM207AQ9NSI2 230 aaPredicted RBP25.24■■□□□ 1.63
SRRM1-222ENST00000596378 PANK4Q9NVE7 773 aa25.24■■□□□ 1.63
SRRM1-222ENST00000596378 YDJCA8MPS7 323 aa25.23■■□□□ 1.63
SRRM1-222ENST00000596378 BMS1Q14692 1282 aaKnown RBP25.23■■□□□ 1.63
SRRM1-222ENST00000596378 SPICE1Q8N0Z3 855 aa25.23■■□□□ 1.63
SRRM1-222ENST00000596378 RETREG2Q8NC44 543 aa25.23■■□□□ 1.63
SRRM1-222ENST00000596378 RCCD1A6NED2 376 aa25.23■■□□□ 1.63
SRRM1-222ENST00000596378 PRR16Q569H4 304 aa25.23■■□□□ 1.63
SRRM1-222ENST00000596378 MED24O75448 989 aa25.22■■□□□ 1.63
SRRM1-222ENST00000596378 PLEKP08567 350 aaPredicted RBP25.22■■□□□ 1.63
SRRM1-222ENST00000596378 ARHGAP4P98171 946 aa25.22■■□□□ 1.63
SRRM1-222ENST00000596378 CCDC122Q5T0U0 273 aa25.22■■□□□ 1.63
SRRM1-222ENST00000596378 AMNQ9BXJ7 453 aa25.22■■□□□ 1.63
SRRM1-222ENST00000596378 LRRC27Q9C0I9 530 aa25.22■■□□□ 1.63
SRRM1-222ENST00000596378 ZNHIT6Q9NWK9 470 aaKnown RBP25.22■■□□□ 1.63
SRRM1-222ENST00000596378 MYO1AQ9UBC5 1043 aa25.22■■□□□ 1.63
SRRM1-222ENST00000596378 SIK3Q9Y2K2 1263 aa25.22■■□□□ 1.63
SRRM1-222ENST00000596378 A0A1W2PRG0 241 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 ENC1O14682 589 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 PLA2G4BP0C869 781 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 USP11P51784 963 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 CYP27A1Q02318 531 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 LRRC63Q05C16 580 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 HYIQ5T013 277 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 MYOCDQ8IZQ8 938 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 CCDC155Q8N6L0 562 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 C7orf43Q8WVR3 580 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms