RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 RAB11FIP4Q86YS3 637 aa15.07■□□□□ 0
USE1-207ENST00000596136 PIBF1Q8WXW3 757 aa15.07■□□□□ 0
USE1-207ENST00000596136 COPS5Q92905 334 aa15.07■□□□□ 0
USE1-207ENST00000596136 EMID1Q96A84 441 aaPredicted RBP15.07■□□□□ 0
USE1-207ENST00000596136 VTI1AQ96AJ9 217 aa15.07■□□□□ 0
USE1-207ENST00000596136 JAKMIP1Q96N16 626 aaKnown RBP15.07■□□□□ 0
USE1-207ENST00000596136 PRDM5Q9NQX1 630 aaPredicted RBP15.07■□□□□ 0
USE1-207ENST00000596136 TMEM39AQ9NV64 488 aa15.07■□□□□ 0
USE1-207ENST00000596136 LAMA2P24043 3122 aaKnown RBP15.06■□□□□ 0
USE1-207ENST00000596136 CPA1P15085 419 aa15.06■□□□□ 0
USE1-207ENST00000596136 ARHGAP1Q07960 439 aa15.06■□□□□ 0
USE1-207ENST00000596136 LY6KQ17RY6 165 aa15.06■□□□□ 0
USE1-207ENST00000596136 BRDTQ58F21 947 aaPredicted RBP15.06■□□□□ 0
USE1-207ENST00000596136 KCNV1Q6PIU1 500 aa15.06■□□□□ 0
USE1-207ENST00000596136 BLOC1S2Q6QNY1 142 aa15.06■□□□□ 0
USE1-207ENST00000596136 TEX2Q8IWB9 1127 aa15.06■□□□□ 0
USE1-207ENST00000596136 IL31RAQ8NI17 732 aa15.06■□□□□ 0
USE1-207ENST00000596136 BADQ92934 168 aa15.06■□□□□ 0
USE1-207ENST00000596136 CNTNAP5Q8WYK1 1306 aa15.06■□□□□ 0
USE1-207ENST00000596136 KLF18A0A0U1RQI7 1052 aa15.05■□□□□ -0
USE1-207ENST00000596136 STAM2O75886 525 aa15.05■□□□□ -0
USE1-207ENST00000596136 TIMP1P01033 207 aa15.05■□□□□ -0
USE1-207ENST00000596136 GH1P01241 217 aa15.05■□□□□ -0
USE1-207ENST00000596136 TGFB3P10600 412 aa15.05■□□□□ -0
USE1-207ENST00000596136 RPS6KB1P23443 525 aa15.05■□□□□ -0
USE1-207ENST00000596136 PSMA5P28066 241 aa15.05■□□□□ -0
USE1-207ENST00000596136 CCND2P30279 289 aa15.05■□□□□ -0
USE1-207ENST00000596136 EVCP57679 992 aa15.05■□□□□ -0
USE1-207ENST00000596136 RTN1Q16799 776 aa15.05■□□□□ -0
USE1-207ENST00000596136 FCHSD1Q86WN1 690 aa15.05■□□□□ -0
USE1-207ENST00000596136 CCDC82Q8N4S0 544 aa15.05■□□□□ -0
USE1-207ENST00000596136 MTG1Q9BT17 334 aaPredicted RBP15.05■□□□□ -0
USE1-207ENST00000596136 NID2Q14112 1375 aa15.05■□□□□ -0
USE1-207ENST00000596136 MYH7BA7E2Y1 1941 aa15.04■□□□□ -0
USE1-207ENST00000596136 SOX1O00570 391 aaPredicted RBP15.04■□□□□ -0
USE1-207ENST00000596136 TLR3O15455 904 aaKnown RBP15.04■□□□□ -0
USE1-207ENST00000596136 MYCLP12524 364 aaPredicted RBP15.04■□□□□ -0
USE1-207ENST00000596136 RAG1P15918 1043 aa15.04■□□□□ -0
USE1-207ENST00000596136 CDC27P30260 824 aa15.04■□□□□ -0
USE1-207ENST00000596136 ICAM3P32942 547 aa15.04■□□□□ -0
USE1-207ENST00000596136 PSMC6P62333 389 aa15.04■□□□□ -0
USE1-207ENST00000596136 MRPS9P82933 396 aaKnown RBP15.04■□□□□ -0
USE1-207ENST00000596136 XRRA1Q6P2D8 792 aa15.04■□□□□ -0
USE1-207ENST00000596136 USP17L6PQ6QN14 398 aa15.04■□□□□ -0
USE1-207ENST00000596136 Q6ZUG5 572 aa15.04■□□□□ -0
USE1-207ENST00000596136 INPP4AQ96PE3 977 aaPredicted RBP15.04■□□□□ -0
USE1-207ENST00000596136 TM6SF1Q9BZW5 370 aa15.04■□□□□ -0
USE1-207ENST00000596136 PSTPIP2Q9H939 334 aa15.04■□□□□ -0
USE1-207ENST00000596136 ZSWIM6Q9HCJ5 1215 aa15.04■□□□□ -0
USE1-207ENST00000596136 MRVI1Q9Y6F6 885 aa15.04■□□□□ -0
USE1-207ENST00000596136 hCG_1642624A0A1W2PR95 340 aa15.03■□□□□ -0
USE1-207ENST00000596136 GOLGA8AA7E2F4 631 aa15.03■□□□□ -0
USE1-207ENST00000596136 GOLGA8BA8MQT2 603 aa15.03■□□□□ -0
USE1-207ENST00000596136 MYL3P08590 195 aa15.03■□□□□ -0
USE1-207ENST00000596136 HOXD8P13378 290 aaPredicted RBP15.03■□□□□ -0
USE1-207ENST00000596136 CASTP20810 708 aaKnown RBP15.03■□□□□ -0
USE1-207ENST00000596136 APOBRQ0VD83 1088 aa15.03■□□□□ -0
USE1-207ENST00000596136 LAMC2Q13753 1193 aa15.03■□□□□ -0
USE1-207ENST00000596136 MYSM1Q5VVJ2 828 aa15.03■□□□□ -0
USE1-207ENST00000596136 MFSD5Q6N075 450 aa15.03■□□□□ -0
USE1-207ENST00000596136 GPR153Q6NV75 609 aa15.03■□□□□ -0
USE1-207ENST00000596136 NFRKBQ6P4R8 1299 aa15.03■□□□□ -0
USE1-207ENST00000596136 SMARCC2Q8TAQ2 1214 aa15.03■□□□□ -0
USE1-207ENST00000596136 AFG1LQ8WV93 481 aa15.03■□□□□ -0
USE1-207ENST00000596136 BRF1Q92994 677 aa15.03■□□□□ -0
USE1-207ENST00000596136 CUL5Q93034 780 aa15.03■□□□□ -0
USE1-207ENST00000596136 ALDH8A1Q9H2A2 487 aaPredicted RBP15.03■□□□□ -0
USE1-207ENST00000596136 CCDC196A0A1B0GTZ2 297 aa15.02■□□□□ -0
USE1-207ENST00000596136 hCG_1984214I3L0E3 225 aa15.02■□□□□ -0
USE1-207ENST00000596136 MMP3P08254 477 aa15.02■□□□□ -0
USE1-207ENST00000596136 ADD1P35611 737 aaKnown RBP15.02■□□□□ -0
USE1-207ENST00000596136 FGD1P98174 961 aa15.02■□□□□ -0
USE1-207ENST00000596136 SP2Q02086 613 aa15.02■□□□□ -0
USE1-207ENST00000596136 PTPN11Q06124 597 aaPredicted RBP15.02■□□□□ -0
USE1-207ENST00000596136 CELF3Q5SZQ8 465 aaKnown RBP15.02■□□□□ -0
USE1-207ENST00000596136 PCNX4Q63HM2 1172 aa15.02■□□□□ -0
USE1-207ENST00000596136 WWC2Q6AWC2 1192 aa15.02■□□□□ -0
USE1-207ENST00000596136 RUFY3Q7L099 469 aa15.02■□□□□ -0
USE1-207ENST00000596136 ZNF713Q8N859 430 aaPredicted RBP15.02■□□□□ -0
USE1-207ENST00000596136 PPTC7Q8NI37 304 aa15.02■□□□□ -0
USE1-207ENST00000596136 V9GY48 417 aaPredicted RBP15.02■□□□□ -0
USE1-207ENST00000596136 SPATA31C2B4DYI2 1134 aa15.01□□□□□ -0.01
USE1-207ENST00000596136 B4GALT4O60513 344 aa15.01□□□□□ -0.01
USE1-207ENST00000596136 METAP2P50579 478 aaKnown RBP eCLIP15.01□□□□□ -0.01
USE1-207ENST00000596136 EPHB4P54760 987 aa15.01□□□□□ -0.01
USE1-207ENST00000596136 FPGSQ05932 587 aa15.01□□□□□ -0.01
USE1-207ENST00000596136 SHHQ15465 462 aa15.01□□□□□ -0.01
USE1-207ENST00000596136 DGKDQ16760 1214 aa15.01□□□□□ -0.01
USE1-207ENST00000596136 NBPF20Q3BBV1 942 aa15.01□□□□□ -0.01
USE1-207ENST00000596136 GNPTABQ3T906 1256 aa15.01□□□□□ -0.01
USE1-207ENST00000596136 TYW1BQ6NUM6 668 aa15.01□□□□□ -0.01
USE1-207ENST00000596136 PPP1R18Q6NYC8 613 aa15.01□□□□□ -0.01
USE1-207ENST00000596136 HEATR3Q7Z4Q2 680 aa15.01□□□□□ -0.01
USE1-207ENST00000596136 DHX37Q8IY37 1157 aaKnown RBP15.01□□□□□ -0.01
USE1-207ENST00000596136 KAT2BQ92831 832 aa15.01□□□□□ -0.01
USE1-207ENST00000596136 GPKOWQ92917 476 aaPredicted RBP eCLIP15.01□□□□□ -0.01
USE1-207ENST00000596136 TRPV6Q9H1D0 765 aa15.01□□□□□ -0.01
USE1-207ENST00000596136 STXBP3O00186 592 aa15□□□□□ -0.01
USE1-207ENST00000596136 PPFIA4O75335 1185 aa15□□□□□ -0.01
USE1-207ENST00000596136 SUPT20HL2P0C7V6 817 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms