RNA–Protein interactions for RNA: ENST00000595700.5

SMG9-203, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-203ENST00000595700 hCG_1642624A0A1W2PR95 340 aa17.05■□□□□ 0.32
SMG9-203ENST00000595700 MMP3P08254 477 aa17.05■□□□□ 0.32
SMG9-203ENST00000595700 SMARCA1P28370 1054 aa17.05■□□□□ 0.32
SMG9-203ENST00000595700 EXOSC10Q01780 885 aaKnown RBP17.05■□□□□ 0.32
SMG9-203ENST00000595700 KRT32Q14532 448 aa17.05■□□□□ 0.32
SMG9-203ENST00000595700 TSGA10IPQ3SY00 556 aa17.05■□□□□ 0.32
SMG9-203ENST00000595700 Q7L0L9 218 aa17.05■□□□□ 0.32
SMG9-203ENST00000595700 CCDC82Q8N4S0 544 aa17.05■□□□□ 0.32
SMG9-203ENST00000595700 AFG1LQ8WV93 481 aa17.05■□□□□ 0.32
SMG9-203ENST00000595700 DDX41Q9UJV9 622 aaKnown RBP17.05■□□□□ 0.32
SMG9-203ENST00000595700 UMODL1Q5DID0 1318 aa17.05■□□□□ 0.32
SMG9-203ENST00000595700 RGS20O76081 388 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 CCND2P30279 289 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 CYP2C18P33260 490 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 FAM47CQ5HY64 1035 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 GPR153Q6NV75 609 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 APOA5Q6Q788 366 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 SYNE3Q6ZMZ3 975 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 TMTC3Q6ZXV5 915 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 DHX32Q7L7V1 743 aaKnown RBP17.04■□□□□ 0.32
SMG9-203ENST00000595700 FANCBQ8NB91 859 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 RNPC3Q96LT9 517 aaKnown RBP17.04■□□□□ 0.32
SMG9-203ENST00000595700 SEZ6LQ9BYH1 1024 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 ALDH8A1Q9H2A2 487 aaPredicted RBP17.04■□□□□ 0.32
SMG9-203ENST00000595700 TRMT13Q9NUP7 481 aaKnown RBP17.04■□□□□ 0.32
SMG9-203ENST00000595700 TANC1Q9C0D5 1861 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 SORBS3O60504 671 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 CPA1P15085 419 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 CHMP4BP1P59074 171 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 NBPF20Q3BBV1 942 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 USP17L6PQ6QN14 398 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 VSIG10LQ86VR7 867 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 DEFB123Q8N688 67 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 HIPK3Q9H422 1215 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 BRPF3Q9ULD4 1205 aa17.04■□□□□ 0.32
SMG9-203ENST00000595700 FRMPD4Q14CM0 1322 aa17.03■□□□□ 0.32
SMG9-203ENST00000595700 CNTNAP5Q8WYK1 1306 aa17.03■□□□□ 0.32
SMG9-203ENST00000595700 KPNA6O60684 536 aa17.03■□□□□ 0.32
SMG9-203ENST00000595700 CSF2RAP15509 400 aa17.03■□□□□ 0.32
SMG9-203ENST00000595700 PPIGQ13427 754 aaKnown RBP eCLIP17.03■□□□□ 0.324e-6■■□□□ 12.5
SMG9-203ENST00000595700 TMEM199Q8N511 208 aa17.03■□□□□ 0.32
SMG9-203ENST00000595700 SMARCC2Q8TAQ2 1214 aa17.03■□□□□ 0.32
SMG9-203ENST00000595700 GPKOWQ92917 476 aaPredicted RBP eCLIP17.03■□□□□ 0.32
SMG9-203ENST00000595700 CUL5Q93034 780 aa17.03■□□□□ 0.32
SMG9-203ENST00000595700 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.03■□□□□ 0.329e-7■■□□□ 11.6
SMG9-203ENST00000595700 NOC4LQ9BVI4 516 aaKnown RBP17.03■□□□□ 0.32
SMG9-203ENST00000595700 SNX14Q9Y5W7 946 aa17.03■□□□□ 0.32
SMG9-203ENST00000595700 SCN5AQ14524 2016 aa17.02■□□□□ 0.32
SMG9-203ENST00000595700 KLF18A0A0U1RQI7 1052 aa17.02■□□□□ 0.31
SMG9-203ENST00000595700 ZBTB43O43298 467 aa17.02■□□□□ 0.31
SMG9-203ENST00000595700 ACRP10323 421 aa17.02■□□□□ 0.31
SMG9-203ENST00000595700 HSPA4P34932 840 aa17.02■□□□□ 0.31
SMG9-203ENST00000595700 CCL23P55773 120 aa17.02■□□□□ 0.31
SMG9-203ENST00000595700 DHX37Q8IY37 1157 aaKnown RBP17.02■□□□□ 0.31
SMG9-203ENST00000595700 JAKMIP1Q96N16 626 aaKnown RBP17.02■□□□□ 0.31
SMG9-203ENST00000595700 GOLGA8AA7E2F4 631 aa17.01■□□□□ 0.31
SMG9-203ENST00000595700 GOLGA8BA8MQT2 603 aa17.01■□□□□ 0.31
SMG9-203ENST00000595700 MEIS2O14770 477 aa17.01■□□□□ 0.31
SMG9-203ENST00000595700 CYP2C9P11712 490 aa17.01■□□□□ 0.31
SMG9-203ENST00000595700 UBA1P22314 1058 aaKnown RBP17.01■□□□□ 0.31
SMG9-203ENST00000595700 MRPS9P82933 396 aaKnown RBP17.01■□□□□ 0.31
SMG9-203ENST00000595700 RTN1Q16799 776 aa17.01■□□□□ 0.31
SMG9-203ENST00000595700 C16orf59Q7L2K0 433 aa17.01■□□□□ 0.31
SMG9-203ENST00000595700 KCNB2Q92953 911 aa17.01■□□□□ 0.31
SMG9-203ENST00000595700 EMID1Q96A84 441 aaPredicted RBP17.01■□□□□ 0.31
SMG9-203ENST00000595700 WNT8AQ9H1J5 351 aa17.01■□□□□ 0.31
SMG9-203ENST00000595700 RBM28Q9NW13 759 aaKnown RBP17.01■□□□□ 0.31
SMG9-203ENST00000595700 NAP1L2Q9ULW6 460 aaPredicted RBP17.01■□□□□ 0.31
SMG9-203ENST00000595700 REC8O95072 547 aa17■□□□□ 0.31
SMG9-203ENST00000595700 GGPS1O95749 300 aa17■□□□□ 0.31
SMG9-203ENST00000595700 HMGB1P09429 215 aaKnown RBP17■□□□□ 0.31
SMG9-203ENST00000595700 ZNF286BP0CG31 522 aa17■□□□□ 0.31
SMG9-203ENST00000595700 CASTP20810 708 aaKnown RBP17■□□□□ 0.31
SMG9-203ENST00000595700 FGD1P98174 961 aa17■□□□□ 0.31
SMG9-203ENST00000595700 SP2Q02086 613 aa17■□□□□ 0.31
SMG9-203ENST00000595700 LAMC2Q13753 1193 aa17■□□□□ 0.31
SMG9-203ENST00000595700 DGKDQ16760 1214 aa17■□□□□ 0.31
SMG9-203ENST00000595700 NFRKBQ6P4R8 1299 aa17■□□□□ 0.31
SMG9-203ENST00000595700 KCNV1Q6PIU1 500 aa17■□□□□ 0.31
SMG9-203ENST00000595700 HEATR3Q7Z4Q2 680 aa17■□□□□ 0.31
SMG9-203ENST00000595700 KAT2BQ92831 832 aa17■□□□□ 0.31
SMG9-203ENST00000595700 SCLYQ96I15 445 aa17■□□□□ 0.31
SMG9-203ENST00000595700 IL23AQ9NPF7 189 aa17■□□□□ 0.31
SMG9-203ENST00000595700 GBF1Q92538 1859 aa16.99■□□□□ 0.31
SMG9-203ENST00000595700 PIK3CDO00329 1044 aa16.99■□□□□ 0.31
SMG9-203ENST00000595700 SUPT20HL2P0C7V6 817 aa16.99■□□□□ 0.31
SMG9-203ENST00000595700 PTPN11Q06124 597 aaPredicted RBP16.99■□□□□ 0.31
SMG9-203ENST00000595700 APOBRQ0VD83 1088 aa16.99■□□□□ 0.31
SMG9-203ENST00000595700 UBE2SQ16763 222 aa16.99■□□□□ 0.31
SMG9-203ENST00000595700 TMEM240Q5SV17 173 aa16.99■□□□□ 0.31
SMG9-203ENST00000595700 CELF3Q5SZQ8 465 aaKnown RBP16.99■□□□□ 0.31
SMG9-203ENST00000595700 MYSM1Q5VVJ2 828 aa16.99■□□□□ 0.31
SMG9-203ENST00000595700 PSRC1Q6PGN9 363 aaPredicted RBP16.99■□□□□ 0.31
SMG9-203ENST00000595700 BLOC1S2Q6QNY1 142 aa16.99■□□□□ 0.31
SMG9-203ENST00000595700 Q6ZUG5 572 aa16.99■□□□□ 0.31
SMG9-203ENST00000595700 PPTC7Q8NI37 304 aa16.99■□□□□ 0.31
SMG9-203ENST00000595700 FAM161BQ96MY7 647 aa16.99■□□□□ 0.31
SMG9-203ENST00000595700 SPATA33Q96N06 139 aa16.99■□□□□ 0.31
SMG9-203ENST00000595700 PSTPIP2Q9H939 334 aa16.99■□□□□ 0.31
SMG9-203ENST00000595700 PPP4R2Q9NY27 417 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms