RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 COPS5Q92905 334 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 TRIM43Q96BQ3 446 aaPredicted RBP18.21■□□□□ 0.51
ZNF550-207ENST00000595560 SEZ6LQ9BYH1 1024 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 AGXT2Q9BYV1 514 aa18.21■□□□□ 0.51
ZNF550-207ENST00000595560 UBE2OQ9C0C9 1292 aaKnown RBP18.21■□□□□ 0.51
ZNF550-207ENST00000595560 GOLGA8AA7E2F4 631 aa18.2■□□□□ 0.5
ZNF550-207ENST00000595560 GOLGA8BA8MQT2 603 aa18.2■□□□□ 0.5
ZNF550-207ENST00000595560 SLC34A2O95436 690 aa18.2■□□□□ 0.5
ZNF550-207ENST00000595560 CCND2P30279 289 aa18.2■□□□□ 0.5
ZNF550-207ENST00000595560 PURAQ00577 322 aaKnown RBP18.2■□□□□ 0.5
ZNF550-207ENST00000595560 FAM126BQ8IXS8 530 aa18.2■□□□□ 0.5
ZNF550-207ENST00000595560 TDHQ8IZJ6 230 aa18.2■□□□□ 0.5
ZNF550-207ENST00000595560 BRF1Q92994 677 aa18.2■□□□□ 0.5
ZNF550-207ENST00000595560 CUL5Q93034 780 aa18.2■□□□□ 0.5
ZNF550-207ENST00000595560 hCG_1642624A0A1W2PR95 340 aa18.19■□□□□ 0.5
ZNF550-207ENST00000595560 MEIS2O14770 477 aa18.19■□□□□ 0.5
ZNF550-207ENST00000595560 RGS20O76081 388 aa18.19■□□□□ 0.5
ZNF550-207ENST00000595560 GH1P01241 217 aa18.19■□□□□ 0.5
ZNF550-207ENST00000595560 MYCLP12524 364 aaPredicted RBP18.19■□□□□ 0.5
ZNF550-207ENST00000595560 APOBRQ0VD83 1088 aa18.19■□□□□ 0.5
ZNF550-207ENST00000595560 ITGA7Q13683 1181 aa18.19■□□□□ 0.5
ZNF550-207ENST00000595560 LY6KQ17RY6 165 aa18.19■□□□□ 0.5
ZNF550-207ENST00000595560 SMARCC2Q8TAQ2 1214 aa18.19■□□□□ 0.5
ZNF550-207ENST00000595560 EMID1Q96A84 441 aaPredicted RBP18.19■□□□□ 0.5
ZNF550-207ENST00000595560 FAM217BQ9NTX9 383 aaPredicted RBP18.19■□□□□ 0.5
ZNF550-207ENST00000595560 TMEM39AQ9NV64 488 aa18.19■□□□□ 0.5
ZNF550-207ENST00000595560 DDX41Q9UJV9 622 aaKnown RBP18.19■□□□□ 0.5
ZNF550-207ENST00000595560 TBX21Q9UL17 535 aa18.19■□□□□ 0.5
ZNF550-207ENST00000595560 MRVI1Q9Y6F6 885 aa18.19■□□□□ 0.5
ZNF550-207ENST00000595560 GRIN2DO15399 1336 aa18.19■□□□□ 0.5
ZNF550-207ENST00000595560 CCDC196A0A1B0GTZ2 297 aa18.18■□□□□ 0.5
ZNF550-207ENST00000595560 KPNA6O60684 536 aa18.18■□□□□ 0.5
ZNF550-207ENST00000595560 CDC27P30260 824 aa18.18■□□□□ 0.5
ZNF550-207ENST00000595560 METAP2P50579 478 aaKnown RBP eCLIP18.18■□□□□ 0.5
ZNF550-207ENST00000595560 ARHGAP1Q07960 439 aa18.18■□□□□ 0.5
ZNF550-207ENST00000595560 KCNV1Q6PIU1 500 aa18.18■□□□□ 0.5
ZNF550-207ENST00000595560 USP17L6PQ6QN14 398 aa18.18■□□□□ 0.5
ZNF550-207ENST00000595560 HEATR3Q7Z4Q2 680 aa18.18■□□□□ 0.5
ZNF550-207ENST00000595560 BADQ92934 168 aa18.18■□□□□ 0.5
ZNF550-207ENST00000595560 PSTPIP2Q9H939 334 aa18.18■□□□□ 0.5
ZNF550-207ENST00000595560 ZSWIM6Q9HCJ5 1215 aa18.18■□□□□ 0.5
ZNF550-207ENST00000595560 hCG_1984214I3L0E3 225 aa18.17■□□□□ 0.5
ZNF550-207ENST00000595560 TLR3O15455 904 aaKnown RBP18.17■□□□□ 0.5
ZNF550-207ENST00000595560 STAM2O75886 525 aa18.17■□□□□ 0.5
ZNF550-207ENST00000595560 CD4P01730 458 aa18.17■□□□□ 0.5
ZNF550-207ENST00000595560 MYL3P08590 195 aa18.17■□□□□ 0.5
ZNF550-207ENST00000595560 TGFB3P10600 412 aa18.17■□□□□ 0.5
ZNF550-207ENST00000595560 RAG1P15918 1043 aa18.17■□□□□ 0.5
ZNF550-207ENST00000595560 ITGB8P26012 769 aa18.17■□□□□ 0.5
ZNF550-207ENST00000595560 PSMC6P62333 389 aa18.17■□□□□ 0.5
ZNF550-207ENST00000595560 PPP1R18Q6NYC8 613 aa18.17■□□□□ 0.5
ZNF550-207ENST00000595560 RUFY3Q7L099 469 aa18.17■□□□□ 0.5
ZNF550-207ENST00000595560 TEX2Q8IWB9 1127 aa18.17■□□□□ 0.5
ZNF550-207ENST00000595560 ZNF713Q8N859 430 aaPredicted RBP18.17■□□□□ 0.5
ZNF550-207ENST00000595560 GPKOWQ92917 476 aaPredicted RBP eCLIP18.17■□□□□ 0.5
ZNF550-207ENST00000595560 MTG1Q9BT17 334 aaPredicted RBP18.17■□□□□ 0.5
ZNF550-207ENST00000595560 TM6SF1Q9BZW5 370 aa18.17■□□□□ 0.5
ZNF550-207ENST00000595560 NAP1L2Q9ULW6 460 aaPredicted RBP18.17■□□□□ 0.5
ZNF550-207ENST00000595560 MMP3P08254 477 aa18.16■□□□□ 0.5
ZNF550-207ENST00000595560 EVCP57679 992 aa18.16■□□□□ 0.5
ZNF550-207ENST00000595560 MRPS9P82933 396 aaKnown RBP18.16■□□□□ 0.5
ZNF550-207ENST00000595560 WWC2Q6AWC2 1192 aa18.16■□□□□ 0.5
ZNF550-207ENST00000595560 XRRA1Q6P2D8 792 aa18.16■□□□□ 0.5
ZNF550-207ENST00000595560 AFG1LQ8WV93 481 aa18.16■□□□□ 0.5
ZNF550-207ENST00000595560 INPP4AQ96PE3 977 aaPredicted RBP18.16■□□□□ 0.5
ZNF550-207ENST00000595560 V9GY48 417 aaPredicted RBP18.16■□□□□ 0.5
ZNF550-207ENST00000595560 SZT2Q5T011 3432 aa18.16■□□□□ 0.5
ZNF550-207ENST00000595560 ADD1P35611 737 aaKnown RBP18.15■□□□□ 0.5
ZNF550-207ENST00000595560 LAMC2Q13753 1193 aa18.15■□□□□ 0.5
ZNF550-207ENST00000595560 LRIT3Q3SXY7 679 aa18.15■□□□□ 0.5
ZNF550-207ENST00000595560 GNPTABQ3T906 1256 aa18.15■□□□□ 0.5
ZNF550-207ENST00000595560 PCNX4Q63HM2 1172 aa18.15■□□□□ 0.5
ZNF550-207ENST00000595560 PPTC7Q8NI37 304 aa18.15■□□□□ 0.5
ZNF550-207ENST00000595560 CYP46A1Q9Y6A2 500 aa18.15■□□□□ 0.5
ZNF550-207ENST00000595560 DOCK5Q9H7D0 1870 aa18.15■□□□□ 0.5
ZNF550-207ENST00000595560 TIMP1P01033 207 aa18.14■□□□□ 0.49
ZNF550-207ENST00000595560 UBA1P22314 1058 aaKnown RBP18.14■□□□□ 0.49
ZNF550-207ENST00000595560 ICAM3P32942 547 aa18.14■□□□□ 0.49
ZNF550-207ENST00000595560 NAPAP54920 295 aa18.14■□□□□ 0.49
ZNF550-207ENST00000595560 TYW1BQ6NUM6 668 aa18.14■□□□□ 0.49
ZNF550-207ENST00000595560 DHX37Q8IY37 1157 aaKnown RBP18.14■□□□□ 0.49
ZNF550-207ENST00000595560 ALDH8A1Q9H2A2 487 aaPredicted RBP18.14■□□□□ 0.49
ZNF550-207ENST00000595560 BARHL2Q9NY43 387 aa18.14■□□□□ 0.49
ZNF550-207ENST00000595560 LAMA2P24043 3122 aaKnown RBP18.14■□□□□ 0.49
ZNF550-207ENST00000595560 SPDYE3A6NKU9 549 aa18.13■□□□□ 0.49
ZNF550-207ENST00000595560 STXBP3O00186 592 aa18.13■□□□□ 0.49
ZNF550-207ENST00000595560 B4GALT4O60513 344 aa18.13■□□□□ 0.49
ZNF550-207ENST00000595560 HOXD8P13378 290 aaPredicted RBP18.13■□□□□ 0.49
ZNF550-207ENST00000595560 SP2Q02086 613 aa18.13■□□□□ 0.49
ZNF550-207ENST00000595560 FPGSQ05932 587 aa18.13■□□□□ 0.49
ZNF550-207ENST00000595560 TOB2Q14106 344 aaPredicted RBP18.13■□□□□ 0.49
ZNF550-207ENST00000595560 DGKDQ16760 1214 aa18.13■□□□□ 0.49
ZNF550-207ENST00000595560 UBE2SQ16763 222 aa18.13■□□□□ 0.49
ZNF550-207ENST00000595560 CELF3Q5SZQ8 465 aaKnown RBP18.13■□□□□ 0.49
ZNF550-207ENST00000595560 MYSM1Q5VVJ2 828 aa18.13■□□□□ 0.49
ZNF550-207ENST00000595560 NFRKBQ6P4R8 1299 aa18.13■□□□□ 0.49
ZNF550-207ENST00000595560 ZFP91Q96JP5 570 aaPredicted RBP18.13■□□□□ 0.49
ZNF550-207ENST00000595560 RIC8AQ9NPQ8 531 aa18.13■□□□□ 0.49
ZNF550-207ENST00000595560 SPATA31C2B4DYI2 1134 aa18.12■□□□□ 0.49
ZNF550-207ENST00000595560 SOX1O00570 391 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms