RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 SWT1Q5T5J6 900 aaKnown RBP18.21■□□□□ 0.51
SIN3B-206ENST00000595541 RUBCNQ92622 972 aa18.21■□□□□ 0.51
SIN3B-206ENST00000595541 KANSL2Q9H9L4 492 aa18.21■□□□□ 0.51
SIN3B-206ENST00000595541 ATP8A2Q9NTI2 1148 aa18.21■□□□□ 0.51
SIN3B-206ENST00000595541 NAP1L1P55209 391 aaKnown RBP18.21■□□□□ 0.51
SIN3B-206ENST00000595541 GRB10Q13322 594 aa18.21■□□□□ 0.51
SIN3B-206ENST00000595541 ERFEQ4G0M1 354 aa18.21■□□□□ 0.51
SIN3B-206ENST00000595541 PDXDC1Q6P996 788 aa18.21■□□□□ 0.51
SIN3B-206ENST00000595541 LRRC55Q6ZSA7 311 aa18.21■□□□□ 0.51
SIN3B-206ENST00000595541 CUEDC2Q9H467 287 aa18.21■□□□□ 0.51
SIN3B-206ENST00000595541 CCDC87Q9NVE4 849 aa18.21■□□□□ 0.51
SIN3B-206ENST00000595541 RREB1Q92766 1687 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 PALMO75781 387 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 MAN2A1Q16706 1144 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 SBK1Q52WX2 424 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 NAA35Q5VZE5 725 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 FBXO33Q7Z6M2 555 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 POTEDQ86YR6 584 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 PROCA1Q8NCQ7 364 aaPredicted RBP18.2■□□□□ 0.5
SIN3B-206ENST00000595541 KRT12Q99456 494 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 NUDT12Q9BQG2 462 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 A0A0G2JS52 829 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 LAD1O00515 517 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 SEMA3FQ13275 785 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 PARP10Q53GL7 1025 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 CFAP58Q5T655 872 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 CNNM4Q6P4Q7 775 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 DGKHQ86XP1 1220 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 PNMA5Q96PV4 448 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 KIAA1551Q9HCM1 1747 aa18.2■□□□□ 0.5
SIN3B-206ENST00000595541 NOL4O94818 638 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 KLRC1P26715 233 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 TXKP42681 527 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 KDM7AQ6ZMT4 941 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 TXNRD3Q86VQ6 643 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 CNPY4Q8N129 248 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 PRPF38AQ8NAV1 312 aaKnown RBP18.19■□□□□ 0.5
SIN3B-206ENST00000595541 AK8Q96MA6 479 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 NOX5Q96PH1 765 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 CEP89Q96ST8 783 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 NCAPGQ9BPX3 1015 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 GEMIN8Q9NWZ8 242 aaKnown RBP18.19■□□□□ 0.5
SIN3B-206ENST00000595541 ARPP21Q9UBL0 812 aaPredicted RBP18.19■□□□□ 0.5
SIN3B-206ENST00000595541 PHLPP1O60346 1717 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 ITPK1Q13572 414 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 CFAP221Q4G0U5 840 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 KCNK18Q7Z418 384 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 SLC51AQ86UW1 340 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 IFT20Q8IY31 132 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 CCDC47Q96A33 483 aaKnown RBP18.19■□□□□ 0.5
SIN3B-206ENST00000595541 PACSIN1Q9BY11 444 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 MEFVO15553 781 aaPredicted RBP18.19■□□□□ 0.5
SIN3B-206ENST00000595541 MNAT1P51948 309 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 TDRD12Q587J7 1177 aaKnown RBP18.19■□□□□ 0.5
SIN3B-206ENST00000595541 C12orf60Q5U649 245 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 ZMYND12Q9H0C1 365 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 MAGEF1Q9HAY2 307 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 BSDC1Q9NW68 430 aaPredicted RBP18.19■□□□□ 0.5
SIN3B-206ENST00000595541 TMEM260Q9NX78 707 aa18.19■□□□□ 0.5
SIN3B-206ENST00000595541 PALM3A6NDB9 673 aaPredicted RBP18.18■□□□□ 0.5
SIN3B-206ENST00000595541 EDIL3O43854 480 aa18.18■□□□□ 0.5
SIN3B-206ENST00000595541 COBLL1Q53SF7 1204 aa18.18■□□□□ 0.5
SIN3B-206ENST00000595541 DNAAF5Q86Y56 855 aa18.18■□□□□ 0.5
SIN3B-206ENST00000595541 TMEM47Q9BQJ4 181 aa18.18■□□□□ 0.5
SIN3B-206ENST00000595541 STX8Q9UNK0 236 aa18.18■□□□□ 0.5
SIN3B-206ENST00000595541 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
SIN3B-206ENST00000595541 HDLBPQ00341 1268 aaKnown RBP18.18■□□□□ 0.5
SIN3B-206ENST00000595541 SMIM5Q71RC9 77 aa18.18■□□□□ 0.5
SIN3B-206ENST00000595541 CACNA2D4Q7Z3S7 1137 aa18.18■□□□□ 0.5
SIN3B-206ENST00000595541 CCDC84Q86UT8 332 aaPredicted RBP18.18■□□□□ 0.5
SIN3B-206ENST00000595541 ZNF473Q8WTR7 871 aaKnown RBP18.18■□□□□ 0.5
SIN3B-206ENST00000595541 INPP4AQ96PE3 977 aaPredicted RBP18.18■□□□□ 0.5
SIN3B-206ENST00000595541 EPN3Q9H201 632 aa18.18■□□□□ 0.5
SIN3B-206ENST00000595541 SCN7AQ01118 1682 aa18.18■□□□□ 0.5
SIN3B-206ENST00000595541 MYH14Q7Z406 1995 aaKnown RBP18.17■□□□□ 0.5
SIN3B-206ENST00000595541 LAMB1P07942 1786 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 SMCO2A6NFE2 343 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 NR1D1P20393 614 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 NAPAP54920 295 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 EHHADHQ08426 723 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 ENOX2Q16206 610 aaKnown RBP18.17■□□□□ 0.5
SIN3B-206ENST00000595541 PTGISQ16647 500 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 GLE1Q53GS7 698 aaKnown RBP18.17■□□□□ 0.5
SIN3B-206ENST00000595541 GPATCH11Q8N954 259 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 TBCKQ8TEA7 893 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 ANKS1AQ92625 1134 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 GOLPH3Q9H4A6 298 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 BIN2Q9UBW5 565 aaPredicted RBP18.17■□□□□ 0.5
SIN3B-206ENST00000595541 KLRF2D3W0D1 207 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 RAD51CO43502 376 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 NONOQ15233 471 aaKnown RBP eCLIP18.17■□□□□ 0.53e-6■■■■□ 21.9
SIN3B-206ENST00000595541 SV2BQ7L1I2 683 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 OTUD6BQ8N6M0 293 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 OR2W6PQ8NHA6 318 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 FGFBP2Q9BYJ0 223 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 TANGO6Q9C0B7 1094 aa18.17■□□□□ 0.5
SIN3B-206ENST00000595541 POTEMA6NI47 508 aa18.16■□□□□ 0.5
SIN3B-206ENST00000595541 RBAK-RBAKDNI3L0D1 243 aa18.16■□□□□ 0.5
SIN3B-206ENST00000595541 PPP1R37O75864 691 aa18.16■□□□□ 0.5
SIN3B-206ENST00000595541 ARID5AQ03989 594 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms